Carrying SNP rs17506395 (T > G) in TP63 gene and CCR5Δ32 mutation associated with the occurrence of breast cancer in Burkina Faso
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Lassina Traoré
, Touwendpoulimdé Isabelle Kiendrebeogo
Abstract
Genetic alterations in the TP63 (GenBank: NC_000003.12, ID: 8626) and CCR5 (receptor 5 chemokine co-receptor) (GenBank: NC_000003.12, ID: 1234) genes may increase the risk of developing breast cancer. The aim of this study was to investigate the probable involvement of polymorphisms rs17506395 in the TP63 (tumour protein 63) gene and the CCR5Δ32 mutation in the occurrence of breast cancer in Burkina Faso. This case–control study included 72 patients and 72 controls. Genotyping of SNP rs17506395 (TP63) was performed by polymerase chain reaction–restriction fragment length polymorphism, and genotyping of the CCR5Δ32 mutation was performed by allele-specific oligonucleotide polymerase chain reaction. For SNP rs17506395 (TP63), the genotypic frequencies of wild-type homozygotes (TT) and heterozygotes (TG) were, respectively, 27.72 and 72.22% in cases and 36.11 and 63.89% in controls. No mutated homozygotes (GG) were observed. For the CCR5Δ32 mutation, the genotypic frequencies of wild-type homozygotes (WT/WT) and heterozygotes (WT/Δ32) were 87.5 and 13.5%, respectively, in the cases and 89.29 and 10.71%, respectively, in the controls. No mutated homozygotes (Δ32/Δ32) were observed. None of the polymorphisms rs17506395 of the TP63 gene (OR = 1.47, 95% CI = 0.69–3.17, P = 0.284) and the CCR5Δ32 mutation (OR = 1.32, 95% CI = 0.46–3.77; P = 0.79) were associated with the occurrence of breast cancer in this study.
1 Introduction
Breast cancer is a major public health problem. In 2020, according to GLOBOCAN, it was the most frequently diagnosed cancer in women, causing the greatest loss of life in both developed and developing countries. In 2020, there were around 2,261,419 new cases and 684,996 deaths worldwide [1]. In Burkina Faso, over the same period, 1,927 new cases were diagnosed, compared with 1,142 deaths, making it the leading cause of death from cancer [1]. In addition, a number of studies have shown the involvement of socio-demographic, clinical, and behavioural factors (age, place of residence, occupation, and lifestyle) in the development of breast cancer [2]. Familial forms are hereditary and result from a genetic predisposition. However, sporadic forms are the result of an association between both genetic and environmental factors [2,3]. Polymorphisms or mutations in certain genes such as BRCA1 and BRCA2 [4,5] and ATM, BRIP1, CHEK2, NBS1, PALB2, and RAD50 [6] are also incriminated in the development of breast cancer. In addition to these polymorphisms and mutations, the SNP rs17506395 (TP63 gene) and the CCR5Δ32 mutation are thought to be involved in the development of breast cancer [7,8].
The TP63 gene (OMIM:603273, HUGO HGNC:15979) belongs to the p53 family and is located on chromosome 3q28. It codes for the p63 protein, which plays a crucial role in the maintenance of stem cells in several epithelial tissues and is required for the normal development of epithelial organs, including the mammary glands [9]. The SNP rs17506395 (T > G) (189803530T > G,189521319T > G,211785T > G) of the TP63 gene, which was initially associated with fertility, has also been implicated in the development of several cancers, including breast cancer [10,11,12].
The CCR5 gene (OMIM:601373, HUGO HGNC:1606) is located on chromosome 3 and comprises three exons encoding the CCR5 protein. CCR5 is a chemokine receptor of the β-chemokine receptor family of integral membrane proteins [7]. A 32-base pair deletion of the CCR5 gene (CCR5Δ32) leads to the formation of a non-functional receptor that causes significant defects in ligand-mediated chemotaxis and has been implicated in a variety of immune-mediated diseases [13,14]. CCR5 may have an indirect effect on cancer progression by controlling the antitumour immune response [7].
The CCR5delta32 mutation (GenBank: NM_001394783.1) has been studied in several cancers including skin cancer, bladder cancer and cancer of the liver [15], cervical cancer [16], osteosarcoma [17], breast cancer [18,19], and oral cancer [20]. These broad studies on different kinds of cancer, however, often suggest contradictory results that bring up the importance of further studying these mutations in different populations.
Genetic predisposition to breast cancer in the African population is less well studied [8]. In Burkina Faso, previous studies have focused on certain genetic factors and breast and prostate cancers, in particular HLA-DRB1*11 1*12, TP53 and CHEK2, BRCA1, and 943ins10 [21,22,23]; exons of BRCA1 and BRCA2 [24]; R462Q (rs 486907) and D541E (rs 627928) of RNASEL gene [25]; Ser217Leu and Ala541Thr of ELAC2 gene [26]; and ERCC1 (rs3212986) and ERCC2 (rs1799793, rs13181) [27]. However, no study has yet looked at the involvement or otherwise of the TP63 and CCR5 genes in the occurrence of cancer in Burkina Faso. However, a study has been conducted in Cameroon to elucidate the involvement of SNP rs17506395 in the development of breast cancer [8], and it was found that the rs17506395 of the TP63 gene was not involved in the development of breast cancer (OR = 0.86, P = 0.1269). It is in this context that this study aimed to investigate the probable involvement of the SNP rs17506395 of the TP63 gene and the CCR5Δ32 mutation in the occurrence of breast cancer in Burkina Faso.
This could contribute to not only knowledge of the genetic risk factors for breast cancer but also provide knowledge that could be used in a strategy to prevent the disease.
2 Materials and methods
2.1 Setting and study population
This was a descriptive and analytical case–control study in Ouagadougou, Burkina-Faso. The study population consisted of 144 women, 72 of whom were patients with breast cancer (cases) and 72 healthy women without breast cancer (controls) who attended consultations at two University Hospitals: Yalgado OUEDRAOGO (CHU-YO) and Bogodogo (CHU-B) and two medical centres with a surgical unit: Schiphra and Paul VI. Various biomolecular tests were carried out at the Laboratory of Molecular and Genetic Biology (LABIOGENE), Joseph KI-ZERBO University, and Pietro Annigoni Biomolecular Research Centre (CERBA). In this study, any participant who received anatomopathological confirmation was considered a “case.” Eligible controls were women with no breast abnormality on ultrasound examination. These controls shared the same socio-demographic framework as the patients in this study.
Any participant without anatomopathological confirmation of breast cancer and those with breast cancer who had not given their consent to take part in the study were excluded.
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Informed consent: Informed consent has been obtained from all individuals included in this study.
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Ethical approval: The research related to human use has been complied with all the relevant national regulations, institutional policies and in accordance with the tenets of the Helsinki Declaration, and has been approved by the Health Research Ethics Committee (CERS) of Burkina Faso (Deliberation No. 2019-5-067 of May 15, 2019).
2.2 Data collection and sampling
A questionnaire was administered to the patients to collect their socio-demographic, anthropometric, and clinical data. Five millilitres (5 mL) of venous blood was then collected in an EDTA (ethylene-diamine-tetra-acetic acid) tube and centrifuged at 3,500 rpm for 15 min. The plasma and pellet were stored separately at −20°C.
2.3 DNA extraction, quantification, and purity testing
The participant’s genomic DNAs were extracted using the QIAamp®DSP DNA Blood Mini kit (QIAGEN, GmbH, QIAGEN Strabe1, D-40724 Hilden, Germany). The Nanodrop (Thermo Fisher Scientific) was used to quantify and check the purity of the extracted DNA, the concentration of which was adjusted to 10 ng/µL.
2.4 Genotyping of SNP rs17506395 (T > G) in TP63 and CCR5Δ32 mutation
For the rs17506395 polymorphism of the TP63 gene, polymerase chain reaction-restriction fragment length polymorphism was used, and for the Δ32 mutation of the CCR5 gene, allele-specific oligonucleotide polymerase chain reaction (ASO-PCR).
2.4.1 SNP rs17506395 (T > G) in TP63
A reaction mixture with a total volume of 25 µL (per sample) composed of 4 µL of 5X FIREPOL®Master Mix (Solis BioDyne), 0.5 µL of each primer (0.5 µM), 14 µL of sterile water, and 5 µL of DNA (10 ng/µL). The sequences of the primer pairs used are recorded in Table 1 (Guleria et al., 2012; Tiofack et al., 2020). Amplification was carried out using the Gene Amp®PCR System 9700 thermal cycler (Applied Biosystems) following the amplification programme: initial denaturation at 94°C for 5 min followed by 40 amplification cycles (denaturation at 94°C, 30 s, hybridisation at 57°C for 30 s, and elongation at 72°C, 30 s), and final elongation at 72°C for 7 min. The PCR products were then enzymatically digested with the MboII enzyme at 37°C for 3 h. Finally, the digestion products were subjected to electrophoretic migration for 45 min (100 V) on a 2% agarose gel containing 2 µL of ethidium bromide (10 mg/mL) and visualised using the “Vilber” apparatus (vilber Lourmat).
Primers for amplification of SNP rs17506395 (T > G) in TP63 and CCR5Δ32 mutation
Polymorphism | Primers | Amplicons size (bp) |
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TP63 (rs17506395) | F: 5′-ACA GAT AAA TTG GTG GAG AGA GAT-3′ | 450pb; After digestion: 215pb, 235pb and 450pb |
R: 5′-CAC TGT TTG GAC CCT GGAA- 3' | ||
CCR5 (mutation Δ32) | F: 5′-GTG GTG ACA AGT GTG ATC AC-3′ | 320pb and 288pb |
R: 5′-TTG TAG GGA GCC CAG AAG AG-3′ |
2.4.2 ASO-PCR genotyping of CCR5Δ32 mutation
Genotyping of the CCR5 polymorphism was carried out using the ASO-PCR technique. For the Δ32 mutation, genotyping of each sample was carried out in a 25 μL reaction medium containing 15 µL of pure water (molecular biology grade water), 04 µL 5X FIREPOL®Master Mix (Solis BioDyne) 5x, 0.5 µL of each primer (0.5 µM), and 5 µL of DNA (10 ng/µL). Table 1 shows the primer pairs used (Guleria et al., 2012). The thermocycling parameters were an initial denaturation at 94°C for 05 min followed by 50 amplification cycles, then 40 amplification cycles (denaturation at 94°C, 30 s, hybridisation at 55°C for 30 s, and elongation at 72°C, 30 s), and final elongation at 72°C, 7 min using the Gene Amp®PCR System 9700 (Applied Biosystems).
The PCR products were then electrophoresed on a 2% agarose gel, migrated for 45 min (100 volts), and visualised using the “Vilber” apparatus (Vilber Lourmat).
2.5 Statistical analysis
Data were entered using Excel 2016 and analysed using SPSS software version 21.0, R software version 4.2.1, and Epi Info software version 7. The chi-square test was used for frequency comparisons. Odds ratios (OR) and 95% confidence intervals (CI) were calculated to assess risk. Results were considered statistically significant for a P-value of less than 0.05.
3 Results
3.1 Clinical and socio-demographic characteristics
Our study included 144 women: 72 patients and 72 controls. Age ranged from 19 to 70 years, with an average of 41.08 ± 12.19 years. The majority of patients (68.06%) were aged strictly over 40. The majority of participants lived in urban areas (93.06% for cases and 100% for controls).
Body mass index (BMI) was calculated according to the US National Institute of Health/National Heart Lung and Blood Institute criteria. A statistically significant association was found between obesity and the occurrence of breast cancer (OR = 3.88, 95% CI = 1.13–14.38, P-value = 0.015). There was no significant association between late menopause and the occurrence of breast cancer (Table 2). Approximately 15.27% of patients had a family history of breast cancer.
Clinical characteristics of the study population
Cases | Controls | OR (95% CI) | ||
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N = 72 (%) | N = 72 (%) | P-value | ||
BMI (kg/m 2 ) | ||||
Lean/normal | 6 (8.33) | 22 (30.56) | — | Reference |
Overweight | 10 (13.9) | 17 (23.61) | 2.15 (0.57–8.70) | 0.203 |
Obesity | 18 (25) | 17 (23.61) | 3.88 (1.13–14.38) | 0.015 |
Other | 38 (52.70) | 16 (22.22) | ||
Late menopause (age 55) | ||||
Yes | 2 (2.78) | 0 (00) | NA | |
No | 70 (97.22) | 72 (100) | — | Reference |
Family history | ||||
Yes | 12 (17.10) | 23 (31.94) | 0.42 (0.19–0.94) | 0.05 |
No | 60 (82.9) | 49 (68.06) | — | Reference |
OR: odd ratio; 95% CI: 95% confidence interval; BMI: body mass index.
3.2 rs17506395 (TP63) polymorphism and risk of breast cancer
3.2.1 Amplification and digestion results
Conventional PCR of a fragment of the TP63 gene yielded an amplicon at 450 bp (Figure 1a) and, after digestion, differentiated between homozygous wild-type individuals (TT): 235 and 215 bp; heterozygous individuals (TG): 215, 235, and 450 bp; and homozygous mutants (GG): 450 bp (Figure 1b). The results revealed either homozygous wild-type individuals (TT) or heterozygotes (TG). No mutant homozygotes were found in the study population (Figure 1b).

Electrophoretic profiles of the TP63 gene: Before (a) and after digestion (b). (M) 100bp molecular weight marker; (a) amplification result after conventional PCR; (b) amplification result after enzymatic digestion.
3.2.2 Genotypic and allelic frequencies
The genotypic frequencies of rs17506395 (TP63) did not conform to the Hardy–Weinberg equilibrium (HWE) between patients (χ² = 23.27, P-value = 0.000001) and controls (χ² = 16.74, P-value = 0.000043). The frequency of the mutated allele [G] was 36.1% in cases and 32% in controls (Table 3). No statistically significant association was observed between this allele and the occurrence of breast cancer (OR = 1.20, 95% CI = 0.72–2.02, P-value = 0.456).
Distribution of allelic and genotypic frequencies of TP63 and CCR5
Cases | Controls | OR (95% CI) | P-value | |
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N = 72 (%) | N = 72 (%) | |||
TP63 (rs17506395) | ||||
Alleles | ||||
T | 92(0.639) | 98 (0.680) | — | Reference |
G | 52 (0.361) | 46 (0.320) | 1.20 (0.72–2.02) | 0.456 |
Genotypes | ||||
TT | 20 (27.78) | 26 (36.11) | — | Reference |
TG | 52 (72.22) | 46 (63.89) | 1.47 (0.69–3.17) | 0.284 |
GG | 0 (0.00) | 0 (0.0) | NA | NA |
CCR5 | ||||
Alleles | ||||
WT | 135(0.9375) | 137 (0.951) | — | Reference |
Δ32 | 9 (0.0625) | 7 (0.049) | 1.33 (0.41–4.46) | 0.596 |
Genotypes | ||||
WT/WT | 63 (87.5) | 65 (89.29) | — | Reference |
WT/Δ32 | 9 (13.5) | 7 (10.71) | 1.32 (0.46–3.77) | 0.79 |
Δ32/Δ32 | 0 (0.00) | 0 (0.00) | NA | NA |
OR: odds ratio; 95% CI: 95% confidence interval; N: number; P: P-value, NA: not applicable.
The results showed that the genotypic frequencies of wild-type homozygotes (TT) and heterozygotes (TG) were, respectively, 27.78% and 72.22% in patients and 36.11% and 63.89% in controls. No homozygous mutations (GG) were observed. No significant association was found between the variants of this polymorphism and breast cancer (G: OR = 1.20, CI = 0.72–2.02, P-value = 0.456; Δ32: OR = 1.33, CI = 0.41–4.46, P-value = 0.596).
3.3 CCR5Δ32 mutation and risk of breast cancer
3.3.1 Amplification results
After conventional PCR amplification, 320 bp bands were obtained. This is the wild-type (WT) allele. Heterozygotes (WT/Δ32) had 320 and 288 bp and mutated homozygotes (Δ32/Δ32) had 288 bp (Figure 2).

Electrophoretic profile of CCR5Δ32 mutation after migration. Numbers 1 to 16 represent samples. Samples 2, 5, 6, 10, 11, and 12: heterozygous 288 bp and 320 bp, and samples 1, 4, 7, 9, 13, 14, 15, 16: homozygous wild type 320 bp. Samples 3 and 8: no migration.
3.3.2 Genotypic and allelic frequencies
Genotypic frequencies were consistent with HWE between patients (χ² = 1.125, P-value = 0.28) and controls (χ² = 1.16, P-value = 0.288). The Δ32 mutant allele of this polymorphism was more prevalent in 6.25% of the patients than in controls (4.9%) (P-value = 0.596) (Table 4). In the general population, the genotypic frequencies of homozygotes (WT/WT) and heterozygotes (WT/Δ32) were 87.5% and 13.5%, respectively, but no mutated homozygotes (Δ32/Δ32) were found. In particular, these same genotypes (WT/WT and WT/Δ32) were represented in patients (87.5%, 13.5%) and controls (89.29%, 10.71%), respectively. No Δ32/Δ32 homozygotes were observed. Also, no significant association was found between variants of this polymorphism and breast cancer (OR = 1.33, 95% CI = 0.41–4.460, P-value = 0.596).
Association between socio-characteristic and genotypes of the two polymorphisms
Genotypes | TP63 (rs17506395) | OR (95% CI) | P-value | |
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Cases N (%) | Controls N (%) | |||
Pre-menopausal | ||||
TT | 18 (25.71) | 25 (37.88) | — | Reference |
TG | 52 (74.29) | 41 (62.12) | 1.76 (0.80–3.92) | 0.127 |
GG | 0 (0.00) | 0 (0.0) | NA | NA |
CCR5 Δ32 | ||||
WT/WT | 61 (87.14) | 59 (81.94) | — | Reference |
WT/Δ32 | 9 (12.86) | 13 (18.06) | 0.67 (0.23–1.84) | 0.392 |
Δ32/Δ32 | 0 (0.00) | 0 (0.0) | NA | NA |
Post-menopausal | ||||
TT | 2 (100) | 1 (16.67) | — | Reference |
TG | 0 (0.0) | 5 (83.33) | NA | NA |
GG | 0 (0.0) | 0 (0.0) | NA | NA |
CCR5 Δ32 | ||||
WT/WT | 2 (100) | 6 (100) | — | Reference |
WT/Δ32 | 0 (0.0) | 0 (0.0) | NA | NA |
Δ32/Δ32 | 0 (0.0) | 0 (0.0) | NA | NA |
Genotypes | Family history (%) | OR (95% CI) | P-value | |
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Yes (N = 11) | No (N = 61) | |||
TP63 (rs17506395) | ||||
TT | 4 (36.36) | 16 (26.23) | Reference | |
TG | 7 (63.64) | 45 (73.77) | 0.62 (0.16–2.41) | 0.74 |
GG | 0 (0.00) | 0 (0.0) | NA | NA |
CCR5 Δ32 | ||||
WT/WT | 10 (90.90) | 53 (86.88) | Référence | |
WT/Δ32 | 1 (9.10) | 8 (13.12) | 0.66 (0.07–5.89) | 1 |
Δ32/Δ32 | 0 (0.0) | 0 (0.0) | NA | NA |
Genotypes | Age at diagnostic (ans) | OR (95% CI) | P value | |
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Before 40 years | After 40 years | |||
TP63 (rs17506395) | ||||
TT | 3 (18.75) | 5 (23.81) | — | Reference |
TG | 13 (81.25) | 16 (76.19) | 1.35 (0.21–10.30) | 0.71 |
GG | 0 (0.00) | 0 (0.0) | NA | NA |
CCR5 Δ32 | ||||
WT/WT | 12 (75) | 20 (95.24) | Reference | |
WT/Δ32 | 4 (25) | 1( 4.76) | 6.66 (0.54–34.28) | 0.074 |
Δ32/Δ32 | 0 (0.0) | 0 (0.0) | NA | NA |
OR: odds ratio; 95% CI: 95% confidence interval, NA: not applicable.
3.4 Multivariable logistic analysis: association between certain characteristics and SNP rs17506395 (T > G) in TP63 and CCR5Δ32 mutation
No significant association was found between the different genotypes of the polymorphisms and menopausal status (OR = 1.76, 95% CI = 0.80–3.92, P-value = 0.127), family history (OR = 0.62, 95% CI = 0.16–2.41, P-value = 0.74), and age at diagnosis (OR = 1.35, 95% CI = 0.21–10.30, P-value = 0.71) (Table 4).
3.5 Combined genotypes of SNP rs17506395 (T > G) in TP63 and CCR5Δ32 mutation and breast cancer risk
The combined effect of polymorphisms on breast cancer risk has been demonstrated with several combined genotypes. However, no significant association was found between the combined genotypes of the polymorphisms and breast cancer (Table 5).
Analysis of combined genotypes
TP63 | Gene CCR5 | |||||||||||
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WT/WT | WT/Δ32 | Δ32/Δ32 | ||||||||||
C | T | OR (95% CI) | P | C | T | OR (95% CI) | P | C | T | OR (95% CI) | p | |
N | N | N | N | n | N | |||||||
TT | 13 | 14 | — | Réf | 3 | 2 | 1.62 (0.16–21.94) | 0.626 | 0 | 0 | NA | NA |
TG | 39 | 31 | 1.35 (0.5–3.63) | 0.5 | 5 | 2 | 2.69 (0.35–32.06) | 0.272 | 0 | 0 | NA | NA |
GG | 0 | 0 | NA | NA | 0 | 0 | NA | NA | 0 | 0 | NA | NA |
T: controls; C: cases; N: number; Ref: reference; OR: odds ratio; CI: confidence interval; NA: not applicable.
4 Discussion
4.1 Socio-demographic and clinical characteristics
Our study population ranged in age from 19 to 70 years, with an average of 41.08 ± 12.19 years. Patients had a mean age of 46.22 ± 11.24 years; this mean was close to that of Zouré et al. in 2018 in Burkina Faso (47.4 ± 1.11 years) [21], whereas it differs from those found in Cameroon (41.64 years ± 12.31) (Tiofack et al., 2020) and (49.9 years ± 18.1) in Burkina Faso [28]. The mean age at diagnosis of breast cancer was 40.39 ± 10.96 years in our study. This average is lower (48.27 years and 50.5 years) than that found by Aka et al. [29] in Ivory Coast and Egypt in 2012 [30]. This difference could be justified by the fact that Burkina Faso’s population is characterised by its youth: around 80% of the population is aged under 35, according to the latest census published in 2020 by the National Institute of Statistics and Demography [31].
No significant association was observed between family history and the development of breast cancer in this study. These results differ from those of Antoniou et al. [31] and Economopoulou et al. [32], who were able to establish a link between family history and breast cancer.
Our results showed a significant association between BMI and the occurrence of breast cancer (OR = 3.8, 95% CI: 1.13–14.38, P-value = 0.015). These results are consistent with those found in other studies in France [2,33]. The probable explanation could be an accumulation of intra-abdominal fat by these patients. This accumulation of fat leads to obesity, the causes of which are essentially linked to bad eating habits such as fast food, unlicensed alcohol consumption, and physical inactivity (sedentary lifestyle). This obesity is more prevalent in urban areas due to the proximity of these food products. In fact, women living in urban areas had somewhat stable economic situations and could therefore indulge in an excessively high-fat diet. This excessive weight gain, combined with a sedentary lifestyle, could lead to the onset of breast cancer.
In reality, the link between obesity and breast cancer is complex [34]. Obesity induces metabolic dysfunctions, notably altered cellular metabolism and signalling pathways. It corresponds to excessive weight gain, and this intra-abdominal fat gain can lead to the formation of circulating oestrogens through an enzyme called aromatase. The accumulation of these oestrogens over a period of time in the body is thought to transform breast cells into cancer cells [35]. Obesity is also thought to be associated with hyperinsulinism, an increase in high glucose levels leading to resistance to breast cancer treatment, which in turn favours the appearance of tumours [36].
Late menopause was not associated with a risk of breast cancer. This difference in our results can be explained by the fact that there are fewer menopausal women in our study population. This result differs from those found by Moroccan [37] and Algerian [38] researchers, who showed that late menopause was linked to an increased risk of developing breast cancer. The main cause was found to be prolonged exposure to ovarian hormones in their study populations. The longer a woman waits for menopause, the more she is exposed to oestrogens, which are likely to promote the development of breast cancer. It is also important to note the use of steroid hormones and carcinogenic products by these same populations. They can acquire them through hormone replacement therapy [39]. The use of growth promoters for more than 5 years [40] and the use of hormonal contraceptives over a long period of time [41].
4.2 SNP rs17506395 (TP63) and CCR5Δ32 polymorphisms and breast cancer risk factors
Analysis of the genotypic and allelic frequencies of the study population showed that the different genotypes and alleles in the sample were in HWE for the Δ32 mutation of the CCR5 gene. This was observed in both cases and controls (P-value > 0.05) for the CCR5 polymorphism (x 2 = 1.125, P-value = 0.28 and x 2 = 1.16, P-value = 0.288).
However, for the TP63 gene, the population was not in equilibrium in either cases or controls (x 2 = 23.27, P-value = 0.000001 and x 2 = 16.74, P-value = 0.000043). In fact, Hardy–Weinberg’s law stipulates that within a population, allelic and genotypic frequencies remain constant from one generation to the next [42]. The allelic and genotypic frequencies of the Δ32 mutation in the CCR5 gene are therefore constant from one generation to the next in Burkina Faso. However, the rs17506395 polymorphism does not respect Hardy Weinberg’s law. In 2020, in Cameroon, a study was able to demonstrate that their study population was indeed in equilibrium with P-value = 1 [8]. This difference could be explained by the relatively small size of our study population and also by the heterogeneity of this polymorphism (rs17506395). No association was observed between the rs17506395 polymorphism of the TP63 gene and the development of breast cancer in the study population (P-value > 0.05). Our results corroborate those found in Cameroon that tried to elucidate the involvement of this polymorphism in the occurrence of breast cancer but who did not find a link between this polymorphism and breast cancer regardless of the genotype considered, while another Cameroonian study found a link between the TP63 polymorphism and people aged under 40 (OR = 0.5, 95% CI = 0.26–0.94, P-value = 0.03) [8]. Our results differ from those found in a Pakistani and Asian population, respectively, which had established an association between the TP63 polymorphism and the risk of developing breast cancer. Indeed, according to Fatima et al. in 2019 [43], the WT/Δ32 genotype was associated with an increased risk of developing breast cancer in Pakistan and the associated T allele would increase tumourigenicity because the TT genotype is associated with tumour amplification, making it a potential biomarker for an unfavourable prognosis in patients under 40 years of age [12,44]. According to a study in the same Asia, the GG mutant genotype of the TP63 polymorphism conferred protection against breast cancer [45]. This genotype was not encountered in our study.
We found no association between TG genotype and the development of breast cancer (OR = 1.47, 95% CI = 0.69–3.17, P-value = 0.284). In China, on the other hand, we found an association between breast cancer and the TG genotype in younger people [12]. The discrepancy between these results and those of the present study could be explained by the fact that the majority of our patients were over 40 years of age. In our study, the frequency of the T allele was higher than that of the G allele, although this difference was not statistically significant. These results are similar to those obtained in 2018 [46].
4.3 Association between certain socio-characteristics and polymorphisms (rs17506395 (TP63) and CCR5Δ32)
Our results show that there was no association between the TG genotype of the TP63 polymorphism or the WT/Δ32 genotype of the CCR5 gene and the risk of breast cancer in pre-menopausal women or those with a family history of breast cancer. In terms of pre-menopausal status, these two genotypes had P-value = 0.127 and P-value = 0.392, while family history had P-value = 0.372 and P = 0.515. These data differ from those of a study carried out in the Cameroonian population [8] who found an association between these polymorphisms of the TP63 gene and the Δ32 mutation of the CCR5 gene and the occurrence of breast cancer in women with a family history. Also, in 2014, a study conducted in China [12] showed that TT and TG polymorphisms were significantly associated with an increased risk of breast cancer in women under 40. The likely hypothesis is that these patients have been exposed for a long time to steroid hormones and carcinogens that act on breast cells. This exposure can initiate tumourigenesis by causing DNA damage, such as mutations; in fact, prolonged exposure to hormones induces endocrine disruption, leading to the dysfunction of the hormonal system. This imbalance results in the proliferation of cancer cells. Exposure to carcinogens also causes mutations, notably in the BRCA 1 and 2 genes, which can lead to breast cancer. With regard to the family history of breast cancer and age at diagnosis, no risk was found between these factors and the genotypes of the rs17506395 polymorphisms of the TP63 gene and the CCR5Δ32 mutation. These results are similar to those of the studies carried out in Cameroon [8] and Iran [44]. The same authors reported that there was no association between the rs17506395 (TP63) and CCR5Δ32 (CCR5 gene) polymorphisms and age at diagnosis on the one hand, and family history of breast cancer on the other hand. In our study, most of the people included had no family antecedents, which may explain the absence of any link between family history and the occurrence of breast cancer in our context [8].
4.4 Combined effects of rs17506395 (TP63) and CCR5Δ32 polymorphism genotypes and breast cancer risk
We believe that the association between the two polymorphisms would have a greater influence on the occurrence of breast cancer than the effect of a single polymorphism. However, analysis of our data showed no significant association between the combined genotypes of these two polymorphisms and the occurrence of breast cancer (OR = 1.35, 95% CI = 0.55–3.29, P-value = 0.41). In the literature, to our knowledge, no other study in the past has shown a probable link between the genotypes of the rs17506395 polymorphisms of the TP63 gene and the Δ32 mutation of the CCR5 gene and breast cancer.
4.5 Limitations of our study
The limitations of our study can be summed up essentially not only by the small size of our sample but also by a lack of socio-demographic and clinical information. It would therefore be more interesting to continue the study on a larger population in order to assess more objectively the real impact of these two polymorphisms on the occurrence of breast cancer in Burkina Faso.
5 Conclusion
This first study in Burkina Faso reported the presence of the [G] mutant allele of the TP63 gene in both cases and controls. Like the CCR5 Δ32 mutation, the [Δ32] mutant allele of the CCR5 gene was present in both cases and controls. Neither the (TG) genotype of the TP63 gene nor the (WT/Δ32) genotype of the CCR5 gene was associated with the development of breast cancer in our study population.
Acknowledgements
The authors sincerely thank the Laboratory of Molecular Biology and Genetics (LABIOGENE) and the Pietro Annigoni Biomolecular Research Centre (CERBA) for their valuable contributions to the success of the study.
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Funding information: Authors state no funding involved.
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Author contributions: L.T., M.S., A.A.Z., and J.S. contributed to study design, drafting, and revision of the manuscript; T.I.K. was involved in data and sample collection; S.D., A.D.D.T., and M.D.W.A. contributed to data analysis and revision of the manuscript; F.M.B.T.B.S., T.L., T.W.C.O., R.A.O., A.K.O., and E.T.Y. contributed to bench handling and revision of the manuscript; A.Y.S., N.Z., and H.A.B. participated in the supervision of sample and data collection; C.W.N. and F.W.D. participated in the supervision of handling, revision, and validation of the manuscript. All authors read, edited, and approved the final manuscript.
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Conflict of interest: Authors state no conflict of interest.
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Data availability statement: The datasets generated during and/or analyzed during the current study are available from the corresponding author on reasonable request.
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- Prediction of present and future distribution areas of Juniperus drupacea Labill and determination of ethnobotany properties in Antalya Province, Türkiye
- Population genetics of Todarodes pacificus (Cephalopoda: Ommastrephidae) in the northwest Pacific Ocean via GBS sequencing
- A comparative analysis of dendrometric, macromorphological, and micromorphological characteristics of Pistacia atlantica subsp. atlantica and Pistacia terebinthus in the middle Atlas region of Morocco
- Macrofungal sporocarp community in the lichen Scots pine forests
- Assessing the proximate compositions of indigenous forage species in Yemen’s pastoral rangelands
- Food Science
- Gut microbiota changes associated with low-carbohydrate diet intervention for obesity
- Reexamination of Aspergillus cristatus phylogeny in dark tea: Characteristics of the mitochondrial genome
- Differences in the flavonoid composition of the leaves, fruits, and branches of mulberry are distinguished based on a plant metabolomics approach
- Investigating the impact of wet rendering (solventless method) on PUFA-rich oil from catfish (Clarias magur) viscera
- Non-linear associations between cardiovascular metabolic indices and metabolic-associated fatty liver disease: A cross-sectional study in the US population (2017–2020)
- Knockdown of USP7 alleviates atherosclerosis in ApoE-deficient mice by regulating EZH2 expression
- Utility of dairy microbiome as a tool for authentication and traceability
- Agriculture
- Enhancing faba bean (Vicia faba L.) productivity through establishing the area-specific fertilizer rate recommendation in southwest Ethiopia
- Impact of novel herbicide based on synthetic auxins and ALS inhibitor on weed control
- Perspectives of pteridophytes microbiome for bioremediation in agricultural applications
- Fertilizer application parameters for drip-irrigated peanut based on the fertilizer effect function established from a “3414” field trial
- Improving the productivity and profitability of maize (Zea mays L.) using optimum blended inorganic fertilization
- Application of leaf multispectral analyzer in comparison to hyperspectral device to assess the diversity of spectral reflectance indices in wheat genotypes
- Animal Sciences
- Knockdown of ANP32E inhibits colorectal cancer cell growth and glycolysis by regulating the AKT/mTOR pathway
- Development of a detection chip for major pathogenic drug-resistant genes and drug targets in bovine respiratory system diseases
- Exploration of the genetic influence of MYOT and MB genes on the plumage coloration of Muscovy ducks
- Transcriptome analysis of adipose tissue in grazing cattle: Identifying key regulators of fat metabolism
- Comparison of nutritional value of the wild and cultivated spiny loaches at three growth stages
- Transcriptomic analysis of liver immune response in Chinese spiny frog (Quasipaa spinosa) infected with Proteus mirabilis
- Disruption of BCAA degradation is a critical characteristic of diabetic cardiomyopathy revealed by integrated transcriptome and metabolome analysis
- Plant Sciences
- Effect of long-term in-row branch covering on soil microorganisms in pear orchards
- Photosynthetic physiological characteristics, growth performance, and element concentrations reveal the calcicole–calcifuge behaviors of three Camellia species
- Transcriptome analysis reveals the mechanism of NaHCO3 promoting tobacco leaf maturation
- Bioinformatics, expression analysis, and functional verification of allene oxide synthase gene HvnAOS1 and HvnAOS2 in qingke
- Water, nitrogen, and phosphorus coupling improves gray jujube fruit quality and yield
- Improving grape fruit quality through soil conditioner: Insights from RNA-seq analysis of Cabernet Sauvignon roots
- Role of Embinin in the reabsorption of nucleus pulposus in lumbar disc herniation: Promotion of nucleus pulposus neovascularization and apoptosis of nucleus pulposus cells
- Revealing the effects of amino acid, organic acid, and phytohormones on the germination of tomato seeds under salinity stress
- Combined effects of nitrogen fertilizer and biochar on the growth, yield, and quality of pepper
- Comprehensive phytochemical and toxicological analysis of Chenopodium ambrosioides (L.) fractions
- Impact of “3414” fertilization on the yield and quality of greenhouse tomatoes
- Exploring the coupling mode of water and fertilizer for improving growth, fruit quality, and yield of the pear in the arid region
- Metagenomic analysis of endophytic bacteria in seed potato (Solanum tuberosum)
- Antibacterial, antifungal, and phytochemical properties of Salsola kali ethanolic extract
- Exploring the hepatoprotective properties of citronellol: In vitro and in silico studies on ethanol-induced damage in HepG2 cells
- Enhanced osmotic dehydration of watermelon rind using honey–sucrose solutions: A study on pre-treatment efficacy and mass transfer kinetics
- Effects of exogenous 2,4-epibrassinolide on photosynthetic traits of 53 cowpea varieties under NaCl stress
- Comparative transcriptome analysis of maize (Zea mays L.) seedlings in response to copper stress
- An optimization method for measuring the stomata in cassava (Manihot esculenta Crantz) under multiple abiotic stresses
- Fosinopril inhibits Ang II-induced VSMC proliferation, phenotype transformation, migration, and oxidative stress through the TGF-β1/Smad signaling pathway
- Antioxidant and antimicrobial activities of Salsola imbricata methanolic extract and its phytochemical characterization
- Bioengineering and Biotechnology
- Absorbable calcium and phosphorus bioactive membranes promote bone marrow mesenchymal stem cells osteogenic differentiation for bone regeneration
- New advances in protein engineering for industrial applications: Key takeaways
- An overview of the production and use of Bacillus thuringiensis toxin
- Research progress of nanoparticles in diagnosis and treatment of hepatocellular carcinoma
- Bioelectrochemical biosensors for water quality assessment and wastewater monitoring
- PEI/MMNs@LNA-542 nanoparticles alleviate ICU-acquired weakness through targeted autophagy inhibition and mitochondrial protection
- Unleashing of cytotoxic effects of thymoquinone-bovine serum albumin nanoparticles on A549 lung cancer cells
- Erratum
- Erratum to “Investigating the association between dietary patterns and glycemic control among children and adolescents with T1DM”
- Erratum to “Activation of hypermethylated P2RY1 mitigates gastric cancer by promoting apoptosis and inhibiting proliferation”
- Retraction
- Retraction to “MiR-223-3p regulates cell viability, migration, invasion, and apoptosis of non-small cell lung cancer cells by targeting RHOB”
- Retraction to “A data mining technique for detecting malignant mesothelioma cancer using multiple regression analysis”
- Special Issue on Advances in Neurodegenerative Disease Research and Treatment
- Transplantation of human neural stem cell prevents symptomatic motor behavior disability in a rat model of Parkinson’s disease
- Special Issue on Multi-omics
- Inflammasome complex genes with clinical relevance suggest potential as therapeutic targets for anti-tumor drugs in clear cell renal cell carcinoma
- Gastroesophageal varices in primary biliary cholangitis with anti-centromere antibody positivity: Early onset?
Articles in the same Issue
- Biomedical Sciences
- Constitutive and evoked release of ATP in adult mouse olfactory epithelium
- LARP1 knockdown inhibits cultured gastric carcinoma cell cycle progression and metastatic behavior
- PEGylated porcine–human recombinant uricase: A novel fusion protein with improved efficacy and safety for the treatment of hyperuricemia and renal complications
- Research progress on ocular complications caused by type 2 diabetes mellitus and the function of tears and blepharons
- The role and mechanism of esketamine in preventing and treating remifentanil-induced hyperalgesia based on the NMDA receptor–CaMKII pathway
- Brucella infection combined with Nocardia infection: A case report and literature review
- Detection of serum interleukin-18 level and neutrophil/lymphocyte ratio in patients with antineutrophil cytoplasmic antibody-associated vasculitis and its clinical significance
- Ang-1, Ang-2, and Tie2 are diagnostic biomarkers for Henoch-Schönlein purpura and pediatric-onset systemic lupus erythematous
- PTTG1 induces pancreatic cancer cell proliferation and promotes aerobic glycolysis by regulating c-myc
- Role of serum B-cell-activating factor and interleukin-17 as biomarkers in the classification of interstitial pneumonia with autoimmune features
- Effectiveness and safety of a mumps containing vaccine in preventing laboratory-confirmed mumps cases from 2002 to 2017: A meta-analysis
- Low levels of sex hormone-binding globulin predict an increased breast cancer risk and its underlying molecular mechanisms
- A case of Trousseau syndrome: Screening, detection and complication
- Application of the integrated airway humidification device enhances the humidification effect of the rabbit tracheotomy model
- Preparation of Cu2+/TA/HAP composite coating with anti-bacterial and osteogenic potential on 3D-printed porous Ti alloy scaffolds for orthopedic applications
- Aquaporin-8 promotes human dermal fibroblasts to counteract hydrogen peroxide-induced oxidative damage: A novel target for management of skin aging
- Current research and evidence gaps on placental development in iron deficiency anemia
- Single-nucleotide polymorphism rs2910829 in PDE4D is related to stroke susceptibility in Chinese populations: The results of a meta-analysis
- Pheochromocytoma-induced myocardial infarction: A case report
- Kaempferol regulates apoptosis and migration of neural stem cells to attenuate cerebral infarction by O‐GlcNAcylation of β-catenin
- Sirtuin 5 regulates acute myeloid leukemia cell viability and apoptosis by succinylation modification of glycine decarboxylase
- Apigenin 7-glucoside impedes hypoxia-induced malignant phenotypes of cervical cancer cells in a p16-dependent manner
- KAT2A changes the function of endometrial stromal cells via regulating the succinylation of ENO1
- Current state of research on copper complexes in the treatment of breast cancer
- Exploring antioxidant strategies in the pathogenesis of ALS
- Helicobacter pylori causes gastric dysbacteriosis in chronic gastritis patients
- IL-33/soluble ST2 axis is associated with radiation-induced cardiac injury
- The predictive value of serum NLR, SII, and OPNI for lymph node metastasis in breast cancer patients with internal mammary lymph nodes after thoracoscopic surgery
- Carrying SNP rs17506395 (T > G) in TP63 gene and CCR5Δ32 mutation associated with the occurrence of breast cancer in Burkina Faso
- P2X7 receptor: A receptor closely linked with sepsis-associated encephalopathy
- Probiotics for inflammatory bowel disease: Is there sufficient evidence?
- Identification of KDM4C as a gene conferring drug resistance in multiple myeloma
- Microbial perspective on the skin–gut axis and atopic dermatitis
- Thymosin α1 combined with XELOX improves immune function and reduces serum tumor markers in colorectal cancer patients after radical surgery
- Highly specific vaginal microbiome signature for gynecological cancers
- Sample size estimation for AQP4-IgG seropositive optic neuritis: Retinal damage detection by optical coherence tomography
- The effects of SDF-1 combined application with VEGF on femoral distraction osteogenesis in rats
- Fabrication and characterization of gold nanoparticles using alginate: In vitro and in vivo assessment of its administration effects with swimming exercise on diabetic rats
- Mitigating digestive disorders: Action mechanisms of Mediterranean herbal active compounds
- Distribution of CYP2D6 and CYP2C19 gene polymorphisms in Han and Uygur populations with breast cancer in Xinjiang, China
- VSP-2 attenuates secretion of inflammatory cytokines induced by LPS in BV2 cells by mediating the PPARγ/NF-κB signaling pathway
- Factors influencing spontaneous hypothermia after emergency trauma and the construction of a predictive model
- Long-term administration of morphine specifically alters the level of protein expression in different brain regions and affects the redox state
- Application of metagenomic next-generation sequencing technology in the etiological diagnosis of peritoneal dialysis-associated peritonitis
- Clinical diagnosis, prevention, and treatment of neurodyspepsia syndrome using intelligent medicine
- Case report: Successful bronchoscopic interventional treatment of endobronchial leiomyomas
- Preliminary investigation into the genetic etiology of short stature in children through whole exon sequencing of the core family
- Cystic adenomyoma of the uterus: Case report and literature review
- Mesoporous silica nanoparticles as a drug delivery mechanism
- Dynamic changes in autophagy activity in different degrees of pulmonary fibrosis in mice
- Vitamin D deficiency and inflammatory markers in type 2 diabetes: Big data insights
- Lactate-induced IGF1R protein lactylation promotes proliferation and metabolic reprogramming of lung cancer cells
- Meta-analysis on the efficacy of allogeneic hematopoietic stem cell transplantation to treat malignant lymphoma
- Mitochondrial DNA drives neuroinflammation through the cGAS-IFN signaling pathway in the spinal cord of neuropathic pain mice
- Application value of artificial intelligence algorithm-based magnetic resonance multi-sequence imaging in staging diagnosis of cervical cancer
- Embedded monitoring system and teaching of artificial intelligence online drug component recognition
- Investigation into the association of FNDC1 and ADAMTS12 gene expression with plumage coloration in Muscovy ducks
- Yak meat content in feed and its impact on the growth of rats
- A rare case of Richter transformation with breast involvement: A case report and literature review
- First report of Nocardia wallacei infection in an immunocompetent patient in Zhejiang province
- Rhodococcus equi and Brucella pulmonary mass in immunocompetent: A case report and literature review
- Downregulation of RIP3 ameliorates the left ventricular mechanics and function after myocardial infarction via modulating NF-κB/NLRP3 pathway
- Evaluation of the role of some non-enzymatic antioxidants among Iraqi patients with non-alcoholic fatty liver disease
- The role of Phafin proteins in cell signaling pathways and diseases
- Ten-year anemia as initial manifestation of Castleman disease in the abdominal cavity: A case report
- Coexistence of hereditary spherocytosis with SPTB P.Trp1150 gene variant and Gilbert syndrome: A case report and literature review
- Utilization of convolutional neural networks to analyze microscopic images for high-throughput screening of mesenchymal stem cells
- Exploratory evaluation supported by experimental and modeling approaches of Inula viscosa root extract as a potent corrosion inhibitor for mild steel in a 1 M HCl solution
- Imaging manifestations of ductal adenoma of the breast: A case report
- Gut microbiota and sleep: Interaction mechanisms and therapeutic prospects
- Isomangiferin promotes the migration and osteogenic differentiation of rat bone marrow mesenchymal stem cells
- Prognostic value and microenvironmental crosstalk of exosome-related signatures in human epidermal growth factor receptor 2 positive breast cancer
- Circular RNAs as potential biomarkers for male severe sepsis
- Knockdown of Stanniocalcin-1 inhibits growth and glycolysis in oral squamous cell carcinoma cells
- The expression and biological role of complement C1s in esophageal squamous cell carcinoma
- A novel GNAS mutation in pseudohypoparathyroidism type 1a with articular flexion deformity: A case report
- Predictive value of serum magnesium levels for prognosis in patients with non-small cell lung cancer undergoing EGFR-TKI therapy
- HSPB1 alleviates acute-on-chronic liver failure via the P53/Bax pathway
- IgG4-related disease complicated by PLA2R-associated membranous nephropathy: A case report
- Baculovirus-mediated endostatin and angiostatin activation of autophagy through the AMPK/AKT/mTOR pathway inhibits angiogenesis in hepatocellular carcinoma
- Metformin mitigates osteoarthritis progression by modulating the PI3K/AKT/mTOR signaling pathway and enhancing chondrocyte autophagy
- Evaluation of the activity of antimicrobial peptides against bacterial vaginosis
- Atypical presentation of γ/δ mycosis fungoides with an unusual phenotype and SOCS1 mutation
- Analysis of the microecological mechanism of diabetic kidney disease based on the theory of “gut–kidney axis”: A systematic review
- Omega-3 fatty acids prevent gestational diabetes mellitus via modulation of lipid metabolism
- Refractory hypertension complicated with Turner syndrome: A case report
- Interaction of ncRNAs and the PI3K/AKT/mTOR pathway: Implications for osteosarcoma
- Association of low attenuation area scores with pulmonary function and clinical prognosis in patients with chronic obstructive pulmonary disease
- Long non-coding RNAs in bone formation: Key regulators and therapeutic prospects
- The deubiquitinating enzyme USP35 regulates the stability of NRF2 protein
- Neutrophil-to-lymphocyte ratio and platelet-to-lymphocyte ratio as potential diagnostic markers for rebleeding in patients with esophagogastric variceal bleeding
- G protein-coupled receptor 1 participating in the mechanism of mediating gestational diabetes mellitus by phosphorylating the AKT pathway
- LL37-mtDNA regulates viability, apoptosis, inflammation, and autophagy in lipopolysaccharide-treated RLE-6TN cells by targeting Hsp90aa1
- The analgesic effect of paeoniflorin: A focused review
- Chemical composition’s effect on Solanum nigrum Linn.’s antioxidant capacity and erythrocyte protection: Bioactive components and molecular docking analysis
- Knockdown of HCK promotes HREC cell viability and inner blood–retinal barrier integrity by regulating the AMPK signaling pathway
- The role of rapamycin in the PINK1/Parkin signaling pathway in mitophagy in podocytes
- Laryngeal non-Hodgkin lymphoma: Report of four cases and review of the literature
- Clinical value of macrogenome next-generation sequencing on infections
- Overview of dendritic cells and related pathways in autoimmune uveitis
- TAK-242 alleviates diabetic cardiomyopathy via inhibiting pyroptosis and TLR4/CaMKII/NLRP3 pathway
- Hypomethylation in promoters of PGC-1α involved in exercise-driven skeletal muscular alterations in old age
- Profile and antimicrobial susceptibility patterns of bacteria isolated from effluents of Kolladiba and Debark hospitals
- The expression and clinical significance of syncytin-1 in serum exosomes of hepatocellular carcinoma patients
- A histomorphometric study to evaluate the therapeutic effects of biosynthesized silver nanoparticles on the kidneys infected with Plasmodium chabaudi
- PGRMC1 and PAQR4 are promising molecular targets for a rare subtype of ovarian cancer
- Analysis of MDA, SOD, TAOC, MNCV, SNCV, and TSS scores in patients with diabetes peripheral neuropathy
- SLIT3 deficiency promotes non-small cell lung cancer progression by modulating UBE2C/WNT signaling
- The relationship between TMCO1 and CALR in the pathological characteristics of prostate cancer and its effect on the metastasis of prostate cancer cells
- Heterogeneous nuclear ribonucleoprotein K is a potential target for enhancing the chemosensitivity of nasopharyngeal carcinoma
- PHB2 alleviates retinal pigment epithelium cell fibrosis by suppressing the AGE–RAGE pathway
- Anti-γ-aminobutyric acid-B receptor autoimmune encephalitis with syncope as the initial symptom: Case report and literature review
- Comparative analysis of chloroplast genome of Lonicera japonica cv. Damaohua
- Human umbilical cord mesenchymal stem cells regulate glutathione metabolism depending on the ERK–Nrf2–HO-1 signal pathway to repair phosphoramide mustard-induced ovarian cancer cells
- Electroacupuncture on GB acupoints improves osteoporosis via the estradiol–PI3K–Akt signaling pathway
- Renalase protects against podocyte injury by inhibiting oxidative stress and apoptosis in diabetic nephropathy
- Review: Dicranostigma leptopodum: A peculiar plant of Papaveraceae
- Combination effect of flavonoids attenuates lung cancer cell proliferation by inhibiting the STAT3 and FAK signaling pathway
- Renal microangiopathy and immune complex glomerulonephritis induced by anti-tumour agents: A case report
- Correlation analysis of AVPR1a and AVPR2 with abnormal water and sodium and potassium metabolism in rats
- Gastrointestinal health anti-diarrheal mixture relieves spleen deficiency-induced diarrhea through regulating gut microbiota
- Myriad factors and pathways influencing tumor radiotherapy resistance
- Exploring the effects of culture conditions on Yapsin (YPS) gene expression in Nakaseomyces glabratus
- Screening of prognostic core genes based on cell–cell interaction in the peripheral blood of patients with sepsis
- Coagulation factor II thrombin receptor as a promising biomarker in breast cancer management
- Ileocecal mucinous carcinoma misdiagnosed as incarcerated hernia: A case report
- Methyltransferase like 13 promotes malignant behaviors of bladder cancer cells through targeting PI3K/ATK signaling pathway
- The debate between electricity and heat, efficacy and safety of irreversible electroporation and radiofrequency ablation in the treatment of liver cancer: A meta-analysis
- ZAG promotes colorectal cancer cell proliferation and epithelial–mesenchymal transition by promoting lipid synthesis
- Baicalein inhibits NLRP3 inflammasome activation and mitigates placental inflammation and oxidative stress in gestational diabetes mellitus
- Impact of SWCNT-conjugated senna leaf extract on breast cancer cells: A potential apoptotic therapeutic strategy
- MFAP5 inhibits the malignant progression of endometrial cancer cells in vitro
- Major ozonated autohemotherapy promoted functional recovery following spinal cord injury in adult rats via the inhibition of oxidative stress and inflammation
- Axodendritic targeting of TAU and MAP2 and microtubule polarization in iPSC-derived versus SH-SY5Y-derived human neurons
- Differential expression of phosphoinositide 3-kinase/protein kinase B and Toll-like receptor/nuclear factor kappa B signaling pathways in experimental obesity Wistar rat model
- The therapeutic potential of targeting Oncostatin M and the interleukin-6 family in retinal diseases: A comprehensive review
- BA inhibits LPS-stimulated inflammatory response and apoptosis in human middle ear epithelial cells by regulating the Nf-Kb/Iκbα axis
- Role of circRMRP and circRPL27 in chronic obstructive pulmonary disease
- Investigating the role of hyperexpressed HCN1 in inducing myocardial infarction through activation of the NF-κB signaling pathway
- Characterization of phenolic compounds and evaluation of anti-diabetic potential in Cannabis sativa L. seeds: In vivo, in vitro, and in silico studies
- Quantitative immunohistochemistry analysis of breast Ki67 based on artificial intelligence
- Ecology and Environmental Science
- Screening of different growth conditions of Bacillus subtilis isolated from membrane-less microbial fuel cell toward antimicrobial activity profiling
- Degradation of a mixture of 13 polycyclic aromatic hydrocarbons by commercial effective microorganisms
- Evaluation of the impact of two citrus plants on the variation of Panonychus citri (Acari: Tetranychidae) and beneficial phytoseiid mites
- Prediction of present and future distribution areas of Juniperus drupacea Labill and determination of ethnobotany properties in Antalya Province, Türkiye
- Population genetics of Todarodes pacificus (Cephalopoda: Ommastrephidae) in the northwest Pacific Ocean via GBS sequencing
- A comparative analysis of dendrometric, macromorphological, and micromorphological characteristics of Pistacia atlantica subsp. atlantica and Pistacia terebinthus in the middle Atlas region of Morocco
- Macrofungal sporocarp community in the lichen Scots pine forests
- Assessing the proximate compositions of indigenous forage species in Yemen’s pastoral rangelands
- Food Science
- Gut microbiota changes associated with low-carbohydrate diet intervention for obesity
- Reexamination of Aspergillus cristatus phylogeny in dark tea: Characteristics of the mitochondrial genome
- Differences in the flavonoid composition of the leaves, fruits, and branches of mulberry are distinguished based on a plant metabolomics approach
- Investigating the impact of wet rendering (solventless method) on PUFA-rich oil from catfish (Clarias magur) viscera
- Non-linear associations between cardiovascular metabolic indices and metabolic-associated fatty liver disease: A cross-sectional study in the US population (2017–2020)
- Knockdown of USP7 alleviates atherosclerosis in ApoE-deficient mice by regulating EZH2 expression
- Utility of dairy microbiome as a tool for authentication and traceability
- Agriculture
- Enhancing faba bean (Vicia faba L.) productivity through establishing the area-specific fertilizer rate recommendation in southwest Ethiopia
- Impact of novel herbicide based on synthetic auxins and ALS inhibitor on weed control
- Perspectives of pteridophytes microbiome for bioremediation in agricultural applications
- Fertilizer application parameters for drip-irrigated peanut based on the fertilizer effect function established from a “3414” field trial
- Improving the productivity and profitability of maize (Zea mays L.) using optimum blended inorganic fertilization
- Application of leaf multispectral analyzer in comparison to hyperspectral device to assess the diversity of spectral reflectance indices in wheat genotypes
- Animal Sciences
- Knockdown of ANP32E inhibits colorectal cancer cell growth and glycolysis by regulating the AKT/mTOR pathway
- Development of a detection chip for major pathogenic drug-resistant genes and drug targets in bovine respiratory system diseases
- Exploration of the genetic influence of MYOT and MB genes on the plumage coloration of Muscovy ducks
- Transcriptome analysis of adipose tissue in grazing cattle: Identifying key regulators of fat metabolism
- Comparison of nutritional value of the wild and cultivated spiny loaches at three growth stages
- Transcriptomic analysis of liver immune response in Chinese spiny frog (Quasipaa spinosa) infected with Proteus mirabilis
- Disruption of BCAA degradation is a critical characteristic of diabetic cardiomyopathy revealed by integrated transcriptome and metabolome analysis
- Plant Sciences
- Effect of long-term in-row branch covering on soil microorganisms in pear orchards
- Photosynthetic physiological characteristics, growth performance, and element concentrations reveal the calcicole–calcifuge behaviors of three Camellia species
- Transcriptome analysis reveals the mechanism of NaHCO3 promoting tobacco leaf maturation
- Bioinformatics, expression analysis, and functional verification of allene oxide synthase gene HvnAOS1 and HvnAOS2 in qingke
- Water, nitrogen, and phosphorus coupling improves gray jujube fruit quality and yield
- Improving grape fruit quality through soil conditioner: Insights from RNA-seq analysis of Cabernet Sauvignon roots
- Role of Embinin in the reabsorption of nucleus pulposus in lumbar disc herniation: Promotion of nucleus pulposus neovascularization and apoptosis of nucleus pulposus cells
- Revealing the effects of amino acid, organic acid, and phytohormones on the germination of tomato seeds under salinity stress
- Combined effects of nitrogen fertilizer and biochar on the growth, yield, and quality of pepper
- Comprehensive phytochemical and toxicological analysis of Chenopodium ambrosioides (L.) fractions
- Impact of “3414” fertilization on the yield and quality of greenhouse tomatoes
- Exploring the coupling mode of water and fertilizer for improving growth, fruit quality, and yield of the pear in the arid region
- Metagenomic analysis of endophytic bacteria in seed potato (Solanum tuberosum)
- Antibacterial, antifungal, and phytochemical properties of Salsola kali ethanolic extract
- Exploring the hepatoprotective properties of citronellol: In vitro and in silico studies on ethanol-induced damage in HepG2 cells
- Enhanced osmotic dehydration of watermelon rind using honey–sucrose solutions: A study on pre-treatment efficacy and mass transfer kinetics
- Effects of exogenous 2,4-epibrassinolide on photosynthetic traits of 53 cowpea varieties under NaCl stress
- Comparative transcriptome analysis of maize (Zea mays L.) seedlings in response to copper stress
- An optimization method for measuring the stomata in cassava (Manihot esculenta Crantz) under multiple abiotic stresses
- Fosinopril inhibits Ang II-induced VSMC proliferation, phenotype transformation, migration, and oxidative stress through the TGF-β1/Smad signaling pathway
- Antioxidant and antimicrobial activities of Salsola imbricata methanolic extract and its phytochemical characterization
- Bioengineering and Biotechnology
- Absorbable calcium and phosphorus bioactive membranes promote bone marrow mesenchymal stem cells osteogenic differentiation for bone regeneration
- New advances in protein engineering for industrial applications: Key takeaways
- An overview of the production and use of Bacillus thuringiensis toxin
- Research progress of nanoparticles in diagnosis and treatment of hepatocellular carcinoma
- Bioelectrochemical biosensors for water quality assessment and wastewater monitoring
- PEI/MMNs@LNA-542 nanoparticles alleviate ICU-acquired weakness through targeted autophagy inhibition and mitochondrial protection
- Unleashing of cytotoxic effects of thymoquinone-bovine serum albumin nanoparticles on A549 lung cancer cells
- Erratum
- Erratum to “Investigating the association between dietary patterns and glycemic control among children and adolescents with T1DM”
- Erratum to “Activation of hypermethylated P2RY1 mitigates gastric cancer by promoting apoptosis and inhibiting proliferation”
- Retraction
- Retraction to “MiR-223-3p regulates cell viability, migration, invasion, and apoptosis of non-small cell lung cancer cells by targeting RHOB”
- Retraction to “A data mining technique for detecting malignant mesothelioma cancer using multiple regression analysis”
- Special Issue on Advances in Neurodegenerative Disease Research and Treatment
- Transplantation of human neural stem cell prevents symptomatic motor behavior disability in a rat model of Parkinson’s disease
- Special Issue on Multi-omics
- Inflammasome complex genes with clinical relevance suggest potential as therapeutic targets for anti-tumor drugs in clear cell renal cell carcinoma
- Gastroesophageal varices in primary biliary cholangitis with anti-centromere antibody positivity: Early onset?