Abstract
Stroke is a debilitating condition that often leads to disability and death. The increasing prevalence of stroke has drawn worldwide attention. Extensive evidence indicates a crucial role of genetic determinants in the occurrence and perpetuation of stroke. An Icelandic study identified a significant correlation of the phosphodiesterase 4D (PDE4D) single-nucleotide polymorphism (SNP) rs2910829 with stroke susceptibility. However, subsequent studies reported in Chinese populations were contradictory. We implemented a meta-analysis to inspect whether SNP rs2910829 is related to stroke susceptibility in Chinese populations and subsequently performed an in silico analysis to predict its potential functions. Finally, we analysed data from 24 studies comprising 7,484 Chinese stroke patients and 7,962 control individuals. Compared with the CC genotype, the TT genotype was associated with increased susceptibility to stroke (pooled odds ratio [OR] 1.28, 95% confidence interval [CI] 1.13–1.46, P < 0.001), whereas the CT genotype was not. Correspondingly, a significant association was detected under the recessive model (TT vs CT + CC: OR 1.30, 95% CI 1.15–1.47, P < 0.001). Similar results were obtained in large artery atherosclerosis (LAA) stroke but not in small vessel stroke. Bioinformatics analysis also revealed that SNP rs2910829 and its linked SNPs might be implicated in transcriptional regulation. This meta-analysis reveals significant relationships between the PDE4D SNP rs2910829 and susceptibility to stroke and subtype-LAA stroke in Chinese individuals, and further investigations are warranted to evaluate this effect.
1 Introduction
Stroke is a leading cause of disability and death in adults [1]. It poses a significant health burden worldwide, including in China. In China, the prevalence of stroke is on the rise, and it is estimated that approximately 13 million patients suffer from stroke. The incidence of first stroke among adults aged 40–74 years increased by 8.3% per year from 2002 to 2013 [2].
Stroke caused by monogenic genetic diseases accounts for a very small proportion, perhaps less than 5%, and this proportion is larger in young stroke patients. The vast majority of strokes are complex diseases caused by the combined effects of multiple genetic and environmental factors. In 2002, using a genome-wide search approach, the deCODE group successfully mapped a candidate region on chromosome 5q12 for stroke in Icelandic families [3]. Fine mapping of the locus revealed that phosphodiesterase 4D (PDE4D, OMIM: 600129) may be a susceptibility gene, and subsequent association analysis in an Icelandic stroke cohort identified several significant single-nucleotide polymorphisms (SNPs) and haplotypes in PDE4D [4].
PDE4D is a phosphodiesterase that can specifically hydrolyze cyclic adenosine monophosphate (cAMP) [5]. Endothelial cell integrity, smooth muscle cell function, and inflammation are important in the progression of atherosclerosis [6], large artery atherosclerosis (LAA), and cardioembolic (CE) stroke [7,8]. The long-term elevation of cAMP levels increases the expression of specific PDE4D isoforms through cAMP-dependent transcription factors in human endothelial cells [9], and raises histone levels of PDE4D promoter sequences in activated smooth muscle cells, which may cause atherosclerosis [10,11]. The activation and proliferation of synthetic smooth muscle cells in the intimal layer of the vessel wall promotes the formation of atherosclerosis. PDE4D is involved in the regulation of cAMP signalling in inflammation. PDE4 inhibitors lower the expression of inflammatory cytokines and the migration of inflammatory cells [12,13]. Inflammatory processes increase the vulnerability of cardiac tissue and play a large part in the development and persistence of atrial fibrillation [14,15]. Atrial fibrillation is one of the major risk factors for ischaemic stroke (IS) [16], and concurrent inflammation may further increase the risk [17]. Therefore, PDE4D may be involved in the pathogenesis of stroke, particularly the pathogenesis of LAA and CE stroke.
In the past decade, many studies have attempted to replicate the findings of the deCODE group. In Chinese populations, SNP rs2910829 (SNP87) in PDE4D is a popular research topic. However, the studies have shown conflicting results. For instance, in Chinese Han populations, Lin et al. [18] and Xu [19] took the lead in detecting SNP rs2910829, but they did not find a significant association of SNP rs2910829 with susceptibility to early onset IS or IS, but Wang and Zhang [20] observed a significant association of SNP rs2910829 with stroke susceptibility.
Therefore, to clarify the relationship between SNP rs2910829 and susceptibility to stroke in Chinese populations, we conducted the current meta-analysis. The functional outcomes of SNP rs2910829 are not yet clear, so preliminary predictions were next made using bioinformatics analysis in the present work. In summary, stroke is prevalent around the world, including in China and its genetic determinants are poorly understood. We addressed this issue and hope that our results will be helpful in the prevention, diagnosis, and treatment of stroke.
2 Methods
This study followed the Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) 2020 statement [21]. The PRISMA checklist is available in Supplementary Materials.
2.1 Literature search
A comprehensive literature search without any language restriction was performed on several databases including PubMed, Embase, ISI Web of Science, Weipu, China National Knowledge Infrastructure (CNKI), Chinese Biomedical (CBM), and Wanfang from inception through August 18, 2022. The search terms used were “phosphodiesterase 4D,” “PDE4D,” “SNP87,” “SNP 87,” “rs2910829,” “stroke,” “cerebral infarction,” “ischaemic stroke,” “ischemic stroke,” “cerebrovascular disease,” and their synonyms. The references of the included literature, as well as relevant meta-analyses and reviews, were also screened to determine whether there were potential studies for inclusion.
2.2 Study selection criteria
Studies that met the following criteria were included in the analysis: (1) case‒control, nested case‒control, or cohort studies; (2) evaluating the association of PDE4D (NG_027957.2) SNP rs2910829 with stroke susceptibility in Chinese populations; and (3) using verified genotyping techniques. Reviews, editorials, case reports, case-only studies, family-based studies, and other articles without primary research findings were excluded.
2.3 Data extraction and quality assessment
The data extracted from each qualified study included the first author’s name, year of publication, ethnicity of the subjects studied, sample size of patients and control individuals, average age of participants, genotyping methods, matching criteria for control individuals, stroke subtypes (if reported), and distribution of genotypes and alleles. Additionally, if the full text or information needed was unavailable, it would be requested from the authors by email and/or phone.
The methodological quality of each individual study was assessed using the Newcastle‒Ottawa Scale (NOS) [22]. A study can be awarded a maximum of nine scores. Higher scores indicate better methodological quality of the included studies. Studies scoring less than 4 points were excluded from the analysis due to poor methodological quality.
Two reviewers (G.Z. and X.T.) independently screened the literature, collected the data, and evaluated the study qualities. The discrepancies were settled by checking and discussing with the senior author (R.L.).
2.4 Statistical analyses
Hardy–Weinberg equilibrium (HWE) among the control individuals was assessed by a χ 2 test. STATA 11.0 software (Stata Corporation, College Station, TX) was used for the statistical analysis. Odds ratios (ORs) and corresponding 95% confidence intervals (CIs) were calculated to assess the strength of the association between SNP rs2910829 and stroke susceptibility for comparisons of two different genotypes (CT vs CC and TT vs CC), as well as under dominant (CT + TT vs CC), additive (T vs C), and recessive (TT vs CT + CC) genetic models.
The heterogeneity between studies was checked by the χ 2-based Q-test and I 2 test. P < 0.10 indicated significant heterogeneity across studies, and a random-effects model using the DerSimonian‒Laird method was chosen for the data analysis; otherwise, a fixed-effects model using the Mantel‒Haenszel method was selected. The I 2 values of <25, 25–50, 50–75, and 75–100% were regarded as no, moderate, large, and extreme heterogeneity, respectively. Meta-regression analysis was conducted to investigate the potential sources of heterogeneity. The publication bias was assessed with Begg’s test and Egger’s linear regression test and visualized with Begg’s funnel and Egger’s publication bias plots.
Sensitivity analyses were carried out to assess the stability of the results. Each study was evaluated using the leave-one-out method, and pooled estimates for the remaining studies were calculated. Sensitivity analyses were also conducted by omitting studies if the genotype frequency of the control individuals deviated from HWE.
2.5 Functional annotation
The HaploReg (http://pubs.broadinstitute.org/mammals/haploreg/haploreg.php) and RegulomeDB (http://regulomedb.org/) databases were utilized to investigate the potential biological functions of SNP rs2910829. Both databases can supply functional annotations for regulatory characteristics of genetic variants situated in noncoding regions.
3 Results
3.1 Eligible studies
As illustrated in Figure 1, a total of 27 articles met the inclusion criteria. After reading the full texts carefully, six were excluded: five that reported on overlapping populations [23–27], as well as one whose data were obviously wrong [28]. Three articles assessed correlations in independent populations, so each article was considered as two separate studies [29–31]. Finally, 24 studies (in 21 articles involving 7,484 stroke patients and 7,962 control individuals) were enrolled in the meta-analysis on SNP rs2910829 and stroke susceptibility (Table 1 and Table S1) [18–20,29–46]. Each study design was case‒control. The genotype frequencies of four studies [36–38,46] were not consistent with HWE expectations in control individuals (Table S1). The NOS results showed that each included study received scores of no less than 4 for methodological quality assessment, with an average score of 6.5 (Table 1).

PRISMA 2020 flow diagram of the literature screening process.
Main characteristics of selected studies in the meta-analysis of the association between SNP rs2910829 and stroke susceptibility
First author | Year | Ethnicity | Sample size | Mean age ± SD (year) | Genotyping method | Matching criteria for controls | Phenotype | NOS | ||
---|---|---|---|---|---|---|---|---|---|---|
Cases | Controls | Cases | Controls | |||||||
Lin HF | 2007 | Chinese Han | 180 | 210 | TaqMan | Age and gender | Early onset IS | 6 | ||
Xu SL | 2008 | Chinese Han | 116 | 110 | 65.9 ± 12.4 | 65.1 ± 12.7 | PCR-RFLP | Age and gender | LAA and SVD | 6 |
Hsieh MS | 2009 | Chinese Han | 108 | 280 | 70 ± 11 | 63 ± 23 | TaqMan | Age and gender | IS | 5 |
Xue H | 2009 | Chinese Han | 639 | 887 | 60.8 ± 9.2 | 60.7 ± 8.2 | PCR-RFLP | Age, gender, and geographical region | LAA, SVD, and HS | 7 |
Sun Y | 2009 | Chinese Han | 646 | 761 | 73.20 ± 9.41 | 73.2 ± 7.30 | Sanger sequencing | Age, gender, and BMI | IS | 8 |
Wang SR | 2009 | Chinese Han | 122 | 44 | 62.57 ± 13.49 | 58.61 ± 17.55 | PCR-LDR | Age, gender, and BMI | LAA, SVD, and HS | 7 |
He Y | 2012 | Chinese Han | 400 | 400 | 61 ± 10 | 58 ± 10 | PCR-RFLP | Age and gender | IS | 7 |
Zhang XN | 2012 | Chinese Han | 116 | 118 | 61.6 ± 10.6 | 61.6 ± 10.1 | PCR-RFLP | Age and gender | IS | 6 |
Li C | 2012 | Chinese Han | 440 | 486 | 66.58 ± 8.40 | 66.10 ± 5.18 | PCR-RFLP | Age and gender | IS | 6 |
Li N | 2012 | Chinese Han | 371 | 371 | 63.88 ± 7.36 | 62.87 ± 7.57 | PCR-RFLP | Age, gender, and hypercholesterolemia | LAA | 7 |
Zhao J | 2012 | Chinese Han | 682 | 598 | 62.09 ± 9.43 | 61.84 ± 10.12 | PCR-RFLP | Age, gender, and BMI | LAA | 8 |
He Y | 2013 | Chinese Han | 186 | 232 | 36.5 ± 6.4 | 36.8 ± 6.8 | PCR-RFLP | Age and gender | Early onset IS | 6 |
Wang RX | 2014 | Chinese Han | 245 | 209 | 62.88 ± 8.75 | 61.21 ± 7.56 | PCR-RFLP | Age and gender | LAA | 6 |
Ma J | 2014 | Chinese Han | 189 | 194 | PCR-RFLP | Age and gender | IS | 6 | ||
Shao M | 2015 | Chinese Han | 459 | 462 | 68.56 ± 10.97 | 63.82 ± 9.22 | MALDI-TOF | Gender, smoking, and drinking | LAA and SVD | 7 |
Shi JP | 2015 | Chinese Han | 126 | 128 | 60.9 ± 9.7 | 62.1 ± 9.4 | PCR-RFLP | Age and gender | IS | 6 |
Feng XW | 2015 | Chinese Han | 168 | 172 | 65.5 ± 4.7 | 66.1 ± 5.3 | PCR-RFLP | Age, gender, and drinking history | IS | 7 |
Yuan JG | 2016 | Chinese Han | 183 | 183 | 60.2 ± 10.6 | 60.1 ± 11.3 | PCR-RFLP | Age and gender | IS | 5 |
Wang X | 2017 | Chinese Han | 610 | 618 | 65.8 ± 15.2 | 66.5 ± 16.1 | PCR-RFLP | Age and gender | IS | 7 |
Zhang L | 2019 | Chinese Han | 881 | 892 | 64.5 ± 14.7 | 65.6 ± 15.3 | PCR-RFLP | Age, gender, and BMI | IS | 8 |
Yue X | 2019 | Chinese Han | 193 | 200 | 33.2 ± 12.8 | 31.1 ± 17.9 | Semiconductor sequencing | Age, gender, drinking history, and diabetes history | Early onset IS | 6 |
Zhang XN | 2012 | Chinese Uyghur | 110 | 102 | 61.5 ± 9.9 | 58.2 ± 9.4 | PCR-RFLP | Age and gender | IS | 6 |
Ma J | 2014 | Chinese Uyghur | 184 | 183 | PCR-RFLP | Age and gender | IS | 6 | ||
Shi JP | 2015 | Chinese Mongolian | 130 | 122 | 60.87 ± 8.1 | 59.13 ± 8.9 | PCR-RFLP | Age and gender | IS | 6 |
PCR-RFLP: polymerase chain reaction-restriction fragment length polymorphism; PCR-LDR: polymerase chain reaction ligase detection reaction; MALDI-TOF: matrix-assisted laser desorption/ionization time-of-flight; BMI: body mass index; IS: ischaemic stroke; LAA: large artery atherosclerosis; SVD: cerebral small vessel disease; HS: haemorrhagic stroke; NOS, Newcastle–Ottawa Scale.
3.2 SNP rs2910829 and stroke susceptibility
The results of the meta-analysis of the association between SNP rs2910829 and stroke susceptibility are summarized in Table 2 and Figure 2. As shown, compared with the CC genotype, the TT genotype was correlated with a greater susceptibility to stroke (OR 1.28, 95% CI 1.13–1.46, P < 0.001) with moderate heterogeneity (I 2 = 26.6%, P = 0.114), whereas the CT genotype was not. Correspondingly, a significant correlation was observed under the recessive model (TT vs CT + CC: OR 1.30, 95% CI 1.15–1.47, P < 0.001). No heterogeneity was found across all studies under the recessive model (I 2 = 0.0%, P = 0.664).
Meta-analysis of the association between SNP rs2910829 and stroke susceptibility
Pooled OR (95% CI) | P OR | I 2 | P H | Statistical model | |
---|---|---|---|---|---|
CT vs CC | 0.93 (0.82–1.05) | 0.247 | 64.4% | <0.001 | Random |
TT vs CC | 1.28 (1.13–1.46) | <0.001 | 26.6% | 0.114 | Fixed |
Dominant | 0.97 (0.85–1.10) | 0.620 | 69.4% | <0.001 | Random |
Additive | 1.02 (0.92–1.13) | 0.770 | 69.6% | <0.001 | Random |
Recessive | 1.30 (1.15–1.47) | <0.001 | 0.0% | 0.664 | Fixed |
P OR and P H are P values for odds ratio and heterogeneity, respectively. P OR values significant at P < 0.05 and P H values significant at P < 0.10 are shown in bold.

Forest plot for the association between stroke susceptibility and SNP rs2910829: (a) (CT vs CC) (random effects), (b) (TT vs CC) (fixed effects), (c) under the dominant model (CT + TT vs CC) (random effects), (d) under the additive model (T vs C) (random effects), and (e) under the recessive model (TT vs CT + CC) (fixed effects).
Three of those 24 studies focused on early-onset IS [18,39,46], and when we excluded them, the findings were basically unchanged. The phenotype of the other two studies was stroke [20,33]. The results remained similar after we excluded those three studies on early-onset IS and haemorrhagic stroke (HS) patients from the two studies on stroke (Tables S2–S4 and Figures S1–S5).
Next, we performed an analysis of other stroke subtypes. Eight studies were finally selected for the meta-analysis of LAA stroke, and six studies were selected for small vessel stroke (Tables S5 and S6). There was only one study for CE stroke, two studies for combined CE and LAA stroke, and two studies for HS. Therefore, there were not enough data for meta-analyses of these stroke subtypes. The results showed that SNP rs2910829 was related to susceptibility to LAA stroke (Table S7 and Figures S6–S10) but not to susceptibility to small vessel stroke (Table S8 and Figures S11–S15). The results of LAA stroke were similar to those of stroke: (1) compared with the CC genotype, the TT genotype was correlated with a greater susceptibility to LAA stroke (OR 1.22, 95% CI 1.00–1.49, P = 0.045) without heterogeneity (I 2 = 0.0%, P = 0.810), whereas the CT genotype was not and (2) a significant correlation was observed under the recessive model (TT vs CT + CC: OR 1.29, 95% CI 1.07–1.55, P = 0.008) without heterogeneity (I 2 = 0.0%, P = 0.847).
3.3 Sensitivity analyses
All the OR values were not substantially altered after conducting sensitivity analyses via the leave-one-out method (Figures S16–S20) and by excluding the four HWE-violating studies (Table S9).
3.4 Publication bias
Begg’s funnel and Egger’s publication bias plots for positive results are shown in Figure 3. There was no significant publication bias.

Begg’s funnel and Egger’s publication bias plots for the association between stroke susceptibility and SNP rs2910829: (a) (TT vs CC) (Begg’s P = 0.286), (b) (TT vs CC) (Egger’s P = 0.536), (c) under the recessive model (TT vs CT + CC) (Begg’s P = 0.472), and (d) under the recessive model (TT vs CT + CC) (Egger’s P = 0.541).
3.5 Functional annotation
According to HaploReg v4.1, two SNPs (rs10939837 and rs6449458) were in strong linkage disequilibrium (LD) with SNP rs2910829 (r 2 ≥ 0.8) in the East Asian (CHB, JPT, and CHS) population (Table S10). All three SNPs are located in the intron regions of PDE4D and might alter transcriptional regulatory element activity. Specifically, SNPs rs10939837, rs6449458, and rs2910829 altered 10, 1, and 3 regulatory motifs, respectively.
Based on RegulomeDB v2.1, all three SNPs were linked to the expression of the protocadherin beta 19 pseudogene (PCDHB19P), which is located approximately 657.8 kb upstream of PDE4D, in frontal cortex tissue (Table S11). For SNP rs2910829, the TT genotype was associated with the highest expression level of PCDHB19P, followed by the CT genotype and then the CC genotype (P = 3.53 × 10−5). SNPs rs10939837 and rs2910829 might affect the expression of prostate androgen-regulated transcript 1 (PART1), having a 5ʹ end that overlaps with the 5ʹ end of PDE4D, in esophageal muscularis mucosa tissue. The genomic region containing SNP rs10939837 was a DNase hypersensitive region detected in brain tissue. SNPs rs10939837 and rs2910829 changed the regulatory motifs to eight proteins and one protein, respectively. Among the three SNPs, SNP rs10939837 had the lowest RegulomeDB rank (Rank = 1f), which might indicate the strongest functional significance. The RegulomeDB rank ranges from 1a to 7, with a lower rank indicating an increased probability of having a regulatory function. Both databases showed that these three SNPs might be involved in transcriptional regulation. However, further investigation is needed to determine which of them is the real causative variant.
4 Discussion
The present meta-analysis revealed that SNP rs2910829 was associated with susceptibility to stroke, especially LAA stroke, in Chinese populations. To our knowledge, thus far, this study is the largest meta-analysis of the relationship between SNP rs2910829 and stroke susceptibility in Chinese populations, and few subtype analyses of stroke have been performed in meta-analyses of the relationship between SNP rs2910829 and stroke susceptibility. Stroke subtypes were analysed in the present meta-analysis.
A total of nine meta-analysis reports on SNP rs2910829 and stroke risk have been documented up to 2022 (Table S12) [47–55]. In 2006, a meta-analysis of nine studies on 3,808 stroke patients and 4,377 control individuals indicated a significant association between stroke risk and SNP rs2910829 (pooled P = 0.002) [47]. However, the subsequent seven meta-analyses all showed that SNP rs2910829 was not associated with IS [48–54]. Among the eight meta-analyses mentioned above, one [49] was conducted only among Asians, one [52] was conducted only among South Asians, and four [50,51,53,54] were also subgrouped for Asians. However, consistent nonsignificant associations in Asians were shown in the six meta-analyses. In 2017, a meta-analysis [55] of 26 studies on 10,529 IS patients and 12,223 control individuals revealed no statistically significant associations with IS for SNP rs2910829 in the overall population [55]. Nevertheless, in the subgroup analysis, a significant correlation was detected under the recessive model (OR 1.15, 95% CI 1.01–1.30, P = 0.030; I 2 = 0.0%, P = 0.900) among Asians, which was very similar to our results in Chinese individuals but not among Caucasians. Among the meta-analyses in Asians, the meta-analysis conducted by Wei et al. [55] included the largest number of studies and combined sample size, followed by the meta-analysis conducted by Liang et al. [53]. Unfortunately, Wei et al. [55] did not conduct further analysis of stroke subtypes. Among the nine meta-analyses, only one [48] included further analysis of stroke subtypes. The above meta-analysis showed that SNP rs2910829 was not associated with either IS or its subtypes [48]. Of note, the majority of subjects in that meta-analysis were Caucasian.
Our current meta-analysis was conducted only among Chinese people and was not extended to other Asian populations or Caucasians, which is a limitation of this study. However, several previous studies have conducted meta-analyses with Asians and Caucasians, while no other detailed meta-analysis has been conducted with Chinese individuals. The effect of SNP rs2910829 on stroke is different between Asians and Caucasians, and its effect in Chinese individuals also needs to be addressed. Here, we conducted a specialized meta-analysis of Chinese individuals to clarify the role of SNP rs2910829 in stroke in Chinese individuals.
As stated in the introduction, PDE4D may be implicated in the pathogenesis of stroke, particularly the pathogenesis of LAA and CE stroke. The deCODE group observed the association of PDE4D variants with stroke, especially with CE and LAA stroke [4]. SNP rs2910829 was reported to be associated with IS susceptibility, particularly susceptibility to combined CE and LAA stroke. The results of our current meta-analysis were basically consistent with those of previous studies. Unfortunately, no additional studies have explored the association of SNP rs2910829 with susceptibility to CE stroke or combined CE and LAA stroke.
In silico analysis showed that the TT genotype of SNP rs2910829 was associated with the highest expression level of PCDHB19P in frontal cortex tissue. The present meta-analysis also showed that the TT genotype was associated with an increased susceptibility to stroke, especially LAA stroke. To date, no studies have predicted the functions of SNP rs2910829 and other variants in strong LD with it, and no corresponding functional studies have been conducted on them. The present study preliminarily predicted their functions. Therefore, further functional studies are needed to determine whether they are true pathogenic variants.
5 Conclusions
This meta-analysis suggests that SNP rs2910829 in PDE4D may contribute to stroke susceptibility, especially LAA stroke susceptibility, in Chinese individuals. This study provides a better understanding of the association of PDE4D SNP rs2910829 with stroke susceptibility in Chinese individuals. Preliminary bioinformatics analysis also indicates that SNP rs2910829 and its linked SNPs may take part in transcriptional regulation. In the future, well-designed epidemiologic studies will help illuminate this impact on stroke, especially on CE and LAA stroke. The potential mechanisms linking the variants to the disease also require further functional studies.
Acknowledgements
The authors thank all researchers who have contributed to the association studies between SNP rs2910829 in PDE4D and stroke susceptibility enrolled in this meta-analysis.
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Funding information: This work is supported by the National Natural Science Foundation of China (Grant/Award Number: 31660309) and Special Project of Science and Technology of Social Development of Hainan Province (Grant/Award Number: 2015SF13).
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Author contributions: G.Z. and X.T. conducted literature search, data collection, research quality evaluation, and data analysis. Q.L. reviewed and revised the manuscript. R.L. designed the study, analysed the data, wrote and revised the manuscript. All authors read and approved the final manuscript.
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Conflict of interest: Authors state no conflict of interest.
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Data availability statement: The datasets generated during and/or analysed during the current study are available from the corresponding author on reasonable request.
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This work is licensed under the Creative Commons Attribution 4.0 International License.
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- Kaempferol regulates apoptosis and migration of neural stem cells to attenuate cerebral infarction by O‐GlcNAcylation of β-catenin
- Sirtuin 5 regulates acute myeloid leukemia cell viability and apoptosis by succinylation modification of glycine decarboxylase
- Apigenin 7-glucoside impedes hypoxia-induced malignant phenotypes of cervical cancer cells in a p16-dependent manner
- KAT2A changes the function of endometrial stromal cells via regulating the succinylation of ENO1
- Current state of research on copper complexes in the treatment of breast cancer
- Exploring antioxidant strategies in the pathogenesis of ALS
- Helicobacter pylori causes gastric dysbacteriosis in chronic gastritis patients
- IL-33/soluble ST2 axis is associated with radiation-induced cardiac injury
- The predictive value of serum NLR, SII, and OPNI for lymph node metastasis in breast cancer patients with internal mammary lymph nodes after thoracoscopic surgery
- Carrying SNP rs17506395 (T > G) in TP63 gene and CCR5Δ32 mutation associated with the occurrence of breast cancer in Burkina Faso
- P2X7 receptor: A receptor closely linked with sepsis-associated encephalopathy
- Probiotics for inflammatory bowel disease: Is there sufficient evidence?
- Identification of KDM4C as a gene conferring drug resistance in multiple myeloma
- Microbial perspective on the skin–gut axis and atopic dermatitis
- Thymosin α1 combined with XELOX improves immune function and reduces serum tumor markers in colorectal cancer patients after radical surgery
- Highly specific vaginal microbiome signature for gynecological cancers
- Sample size estimation for AQP4-IgG seropositive optic neuritis: Retinal damage detection by optical coherence tomography
- The effects of SDF-1 combined application with VEGF on femoral distraction osteogenesis in rats
- Fabrication and characterization of gold nanoparticles using alginate: In vitro and in vivo assessment of its administration effects with swimming exercise on diabetic rats
- Mitigating digestive disorders: Action mechanisms of Mediterranean herbal active compounds
- Distribution of CYP2D6 and CYP2C19 gene polymorphisms in Han and Uygur populations with breast cancer in Xinjiang, China
- VSP-2 attenuates secretion of inflammatory cytokines induced by LPS in BV2 cells by mediating the PPARγ/NF-κB signaling pathway
- Factors influencing spontaneous hypothermia after emergency trauma and the construction of a predictive model
- Long-term administration of morphine specifically alters the level of protein expression in different brain regions and affects the redox state
- Application of metagenomic next-generation sequencing technology in the etiological diagnosis of peritoneal dialysis-associated peritonitis
- Clinical diagnosis, prevention, and treatment of neurodyspepsia syndrome using intelligent medicine
- Case report: Successful bronchoscopic interventional treatment of endobronchial leiomyomas
- Preliminary investigation into the genetic etiology of short stature in children through whole exon sequencing of the core family
- Cystic adenomyoma of the uterus: Case report and literature review
- Mesoporous silica nanoparticles as a drug delivery mechanism
- Dynamic changes in autophagy activity in different degrees of pulmonary fibrosis in mice
- Vitamin D deficiency and inflammatory markers in type 2 diabetes: Big data insights
- Lactate-induced IGF1R protein lactylation promotes proliferation and metabolic reprogramming of lung cancer cells
- Meta-analysis on the efficacy of allogeneic hematopoietic stem cell transplantation to treat malignant lymphoma
- Mitochondrial DNA drives neuroinflammation through the cGAS-IFN signaling pathway in the spinal cord of neuropathic pain mice
- Application value of artificial intelligence algorithm-based magnetic resonance multi-sequence imaging in staging diagnosis of cervical cancer
- Embedded monitoring system and teaching of artificial intelligence online drug component recognition
- Investigation into the association of FNDC1 and ADAMTS12 gene expression with plumage coloration in Muscovy ducks
- Yak meat content in feed and its impact on the growth of rats
- A rare case of Richter transformation with breast involvement: A case report and literature review
- First report of Nocardia wallacei infection in an immunocompetent patient in Zhejiang province
- Rhodococcus equi and Brucella pulmonary mass in immunocompetent: A case report and literature review
- Downregulation of RIP3 ameliorates the left ventricular mechanics and function after myocardial infarction via modulating NF-κB/NLRP3 pathway
- Evaluation of the role of some non-enzymatic antioxidants among Iraqi patients with non-alcoholic fatty liver disease
- The role of Phafin proteins in cell signaling pathways and diseases
- Ten-year anemia as initial manifestation of Castleman disease in the abdominal cavity: A case report
- Coexistence of hereditary spherocytosis with SPTB P.Trp1150 gene variant and Gilbert syndrome: A case report and literature review
- Utilization of convolutional neural networks to analyze microscopic images for high-throughput screening of mesenchymal stem cells
- Exploratory evaluation supported by experimental and modeling approaches of Inula viscosa root extract as a potent corrosion inhibitor for mild steel in a 1 M HCl solution
- Imaging manifestations of ductal adenoma of the breast: A case report
- Gut microbiota and sleep: Interaction mechanisms and therapeutic prospects
- Isomangiferin promotes the migration and osteogenic differentiation of rat bone marrow mesenchymal stem cells
- Prognostic value and microenvironmental crosstalk of exosome-related signatures in human epidermal growth factor receptor 2 positive breast cancer
- Circular RNAs as potential biomarkers for male severe sepsis
- Knockdown of Stanniocalcin-1 inhibits growth and glycolysis in oral squamous cell carcinoma cells
- The expression and biological role of complement C1s in esophageal squamous cell carcinoma
- A novel GNAS mutation in pseudohypoparathyroidism type 1a with articular flexion deformity: A case report
- Predictive value of serum magnesium levels for prognosis in patients with non-small cell lung cancer undergoing EGFR-TKI therapy
- HSPB1 alleviates acute-on-chronic liver failure via the P53/Bax pathway
- IgG4-related disease complicated by PLA2R-associated membranous nephropathy: A case report
- Baculovirus-mediated endostatin and angiostatin activation of autophagy through the AMPK/AKT/mTOR pathway inhibits angiogenesis in hepatocellular carcinoma
- Metformin mitigates osteoarthritis progression by modulating the PI3K/AKT/mTOR signaling pathway and enhancing chondrocyte autophagy
- Evaluation of the activity of antimicrobial peptides against bacterial vaginosis
- Atypical presentation of γ/δ mycosis fungoides with an unusual phenotype and SOCS1 mutation
- Analysis of the microecological mechanism of diabetic kidney disease based on the theory of “gut–kidney axis”: A systematic review
- Omega-3 fatty acids prevent gestational diabetes mellitus via modulation of lipid metabolism
- Refractory hypertension complicated with Turner syndrome: A case report
- Interaction of ncRNAs and the PI3K/AKT/mTOR pathway: Implications for osteosarcoma
- Association of low attenuation area scores with pulmonary function and clinical prognosis in patients with chronic obstructive pulmonary disease
- Long non-coding RNAs in bone formation: Key regulators and therapeutic prospects
- The deubiquitinating enzyme USP35 regulates the stability of NRF2 protein
- Neutrophil-to-lymphocyte ratio and platelet-to-lymphocyte ratio as potential diagnostic markers for rebleeding in patients with esophagogastric variceal bleeding
- G protein-coupled receptor 1 participating in the mechanism of mediating gestational diabetes mellitus by phosphorylating the AKT pathway
- LL37-mtDNA regulates viability, apoptosis, inflammation, and autophagy in lipopolysaccharide-treated RLE-6TN cells by targeting Hsp90aa1
- The analgesic effect of paeoniflorin: A focused review
- Chemical composition’s effect on Solanum nigrum Linn.’s antioxidant capacity and erythrocyte protection: Bioactive components and molecular docking analysis
- Knockdown of HCK promotes HREC cell viability and inner blood–retinal barrier integrity by regulating the AMPK signaling pathway
- The role of rapamycin in the PINK1/Parkin signaling pathway in mitophagy in podocytes
- Laryngeal non-Hodgkin lymphoma: Report of four cases and review of the literature
- Clinical value of macrogenome next-generation sequencing on infections
- Overview of dendritic cells and related pathways in autoimmune uveitis
- TAK-242 alleviates diabetic cardiomyopathy via inhibiting pyroptosis and TLR4/CaMKII/NLRP3 pathway
- Hypomethylation in promoters of PGC-1α involved in exercise-driven skeletal muscular alterations in old age
- Profile and antimicrobial susceptibility patterns of bacteria isolated from effluents of Kolladiba and Debark hospitals
- The expression and clinical significance of syncytin-1 in serum exosomes of hepatocellular carcinoma patients
- A histomorphometric study to evaluate the therapeutic effects of biosynthesized silver nanoparticles on the kidneys infected with Plasmodium chabaudi
- PGRMC1 and PAQR4 are promising molecular targets for a rare subtype of ovarian cancer
- Analysis of MDA, SOD, TAOC, MNCV, SNCV, and TSS scores in patients with diabetes peripheral neuropathy
- SLIT3 deficiency promotes non-small cell lung cancer progression by modulating UBE2C/WNT signaling
- The relationship between TMCO1 and CALR in the pathological characteristics of prostate cancer and its effect on the metastasis of prostate cancer cells
- Heterogeneous nuclear ribonucleoprotein K is a potential target for enhancing the chemosensitivity of nasopharyngeal carcinoma
- PHB2 alleviates retinal pigment epithelium cell fibrosis by suppressing the AGE–RAGE pathway
- Anti-γ-aminobutyric acid-B receptor autoimmune encephalitis with syncope as the initial symptom: Case report and literature review
- Comparative analysis of chloroplast genome of Lonicera japonica cv. Damaohua
- Human umbilical cord mesenchymal stem cells regulate glutathione metabolism depending on the ERK–Nrf2–HO-1 signal pathway to repair phosphoramide mustard-induced ovarian cancer cells
- Electroacupuncture on GB acupoints improves osteoporosis via the estradiol–PI3K–Akt signaling pathway
- Renalase protects against podocyte injury by inhibiting oxidative stress and apoptosis in diabetic nephropathy
- Review: Dicranostigma leptopodum: A peculiar plant of Papaveraceae
- Combination effect of flavonoids attenuates lung cancer cell proliferation by inhibiting the STAT3 and FAK signaling pathway
- Renal microangiopathy and immune complex glomerulonephritis induced by anti-tumour agents: A case report
- Correlation analysis of AVPR1a and AVPR2 with abnormal water and sodium and potassium metabolism in rats
- Gastrointestinal health anti-diarrheal mixture relieves spleen deficiency-induced diarrhea through regulating gut microbiota
- Myriad factors and pathways influencing tumor radiotherapy resistance
- Exploring the effects of culture conditions on Yapsin (YPS) gene expression in Nakaseomyces glabratus
- Screening of prognostic core genes based on cell–cell interaction in the peripheral blood of patients with sepsis
- Coagulation factor II thrombin receptor as a promising biomarker in breast cancer management
- Ileocecal mucinous carcinoma misdiagnosed as incarcerated hernia: A case report
- Methyltransferase like 13 promotes malignant behaviors of bladder cancer cells through targeting PI3K/ATK signaling pathway
- The debate between electricity and heat, efficacy and safety of irreversible electroporation and radiofrequency ablation in the treatment of liver cancer: A meta-analysis
- ZAG promotes colorectal cancer cell proliferation and epithelial–mesenchymal transition by promoting lipid synthesis
- Baicalein inhibits NLRP3 inflammasome activation and mitigates placental inflammation and oxidative stress in gestational diabetes mellitus
- Impact of SWCNT-conjugated senna leaf extract on breast cancer cells: A potential apoptotic therapeutic strategy
- MFAP5 inhibits the malignant progression of endometrial cancer cells in vitro
- Major ozonated autohemotherapy promoted functional recovery following spinal cord injury in adult rats via the inhibition of oxidative stress and inflammation
- Axodendritic targeting of TAU and MAP2 and microtubule polarization in iPSC-derived versus SH-SY5Y-derived human neurons
- Differential expression of phosphoinositide 3-kinase/protein kinase B and Toll-like receptor/nuclear factor kappa B signaling pathways in experimental obesity Wistar rat model
- The therapeutic potential of targeting Oncostatin M and the interleukin-6 family in retinal diseases: A comprehensive review
- BA inhibits LPS-stimulated inflammatory response and apoptosis in human middle ear epithelial cells by regulating the Nf-Kb/Iκbα axis
- Role of circRMRP and circRPL27 in chronic obstructive pulmonary disease
- Investigating the role of hyperexpressed HCN1 in inducing myocardial infarction through activation of the NF-κB signaling pathway
- Characterization of phenolic compounds and evaluation of anti-diabetic potential in Cannabis sativa L. seeds: In vivo, in vitro, and in silico studies
- Quantitative immunohistochemistry analysis of breast Ki67 based on artificial intelligence
- Ecology and Environmental Science
- Screening of different growth conditions of Bacillus subtilis isolated from membrane-less microbial fuel cell toward antimicrobial activity profiling
- Degradation of a mixture of 13 polycyclic aromatic hydrocarbons by commercial effective microorganisms
- Evaluation of the impact of two citrus plants on the variation of Panonychus citri (Acari: Tetranychidae) and beneficial phytoseiid mites
- Prediction of present and future distribution areas of Juniperus drupacea Labill and determination of ethnobotany properties in Antalya Province, Türkiye
- Population genetics of Todarodes pacificus (Cephalopoda: Ommastrephidae) in the northwest Pacific Ocean via GBS sequencing
- A comparative analysis of dendrometric, macromorphological, and micromorphological characteristics of Pistacia atlantica subsp. atlantica and Pistacia terebinthus in the middle Atlas region of Morocco
- Macrofungal sporocarp community in the lichen Scots pine forests
- Assessing the proximate compositions of indigenous forage species in Yemen’s pastoral rangelands
- Food Science
- Gut microbiota changes associated with low-carbohydrate diet intervention for obesity
- Reexamination of Aspergillus cristatus phylogeny in dark tea: Characteristics of the mitochondrial genome
- Differences in the flavonoid composition of the leaves, fruits, and branches of mulberry are distinguished based on a plant metabolomics approach
- Investigating the impact of wet rendering (solventless method) on PUFA-rich oil from catfish (Clarias magur) viscera
- Non-linear associations between cardiovascular metabolic indices and metabolic-associated fatty liver disease: A cross-sectional study in the US population (2017–2020)
- Knockdown of USP7 alleviates atherosclerosis in ApoE-deficient mice by regulating EZH2 expression
- Utility of dairy microbiome as a tool for authentication and traceability
- Agriculture
- Enhancing faba bean (Vicia faba L.) productivity through establishing the area-specific fertilizer rate recommendation in southwest Ethiopia
- Impact of novel herbicide based on synthetic auxins and ALS inhibitor on weed control
- Perspectives of pteridophytes microbiome for bioremediation in agricultural applications
- Fertilizer application parameters for drip-irrigated peanut based on the fertilizer effect function established from a “3414” field trial
- Improving the productivity and profitability of maize (Zea mays L.) using optimum blended inorganic fertilization
- Application of leaf multispectral analyzer in comparison to hyperspectral device to assess the diversity of spectral reflectance indices in wheat genotypes
- Animal Sciences
- Knockdown of ANP32E inhibits colorectal cancer cell growth and glycolysis by regulating the AKT/mTOR pathway
- Development of a detection chip for major pathogenic drug-resistant genes and drug targets in bovine respiratory system diseases
- Exploration of the genetic influence of MYOT and MB genes on the plumage coloration of Muscovy ducks
- Transcriptome analysis of adipose tissue in grazing cattle: Identifying key regulators of fat metabolism
- Comparison of nutritional value of the wild and cultivated spiny loaches at three growth stages
- Transcriptomic analysis of liver immune response in Chinese spiny frog (Quasipaa spinosa) infected with Proteus mirabilis
- Disruption of BCAA degradation is a critical characteristic of diabetic cardiomyopathy revealed by integrated transcriptome and metabolome analysis
- Plant Sciences
- Effect of long-term in-row branch covering on soil microorganisms in pear orchards
- Photosynthetic physiological characteristics, growth performance, and element concentrations reveal the calcicole–calcifuge behaviors of three Camellia species
- Transcriptome analysis reveals the mechanism of NaHCO3 promoting tobacco leaf maturation
- Bioinformatics, expression analysis, and functional verification of allene oxide synthase gene HvnAOS1 and HvnAOS2 in qingke
- Water, nitrogen, and phosphorus coupling improves gray jujube fruit quality and yield
- Improving grape fruit quality through soil conditioner: Insights from RNA-seq analysis of Cabernet Sauvignon roots
- Role of Embinin in the reabsorption of nucleus pulposus in lumbar disc herniation: Promotion of nucleus pulposus neovascularization and apoptosis of nucleus pulposus cells
- Revealing the effects of amino acid, organic acid, and phytohormones on the germination of tomato seeds under salinity stress
- Combined effects of nitrogen fertilizer and biochar on the growth, yield, and quality of pepper
- Comprehensive phytochemical and toxicological analysis of Chenopodium ambrosioides (L.) fractions
- Impact of “3414” fertilization on the yield and quality of greenhouse tomatoes
- Exploring the coupling mode of water and fertilizer for improving growth, fruit quality, and yield of the pear in the arid region
- Metagenomic analysis of endophytic bacteria in seed potato (Solanum tuberosum)
- Antibacterial, antifungal, and phytochemical properties of Salsola kali ethanolic extract
- Exploring the hepatoprotective properties of citronellol: In vitro and in silico studies on ethanol-induced damage in HepG2 cells
- Enhanced osmotic dehydration of watermelon rind using honey–sucrose solutions: A study on pre-treatment efficacy and mass transfer kinetics
- Effects of exogenous 2,4-epibrassinolide on photosynthetic traits of 53 cowpea varieties under NaCl stress
- Comparative transcriptome analysis of maize (Zea mays L.) seedlings in response to copper stress
- An optimization method for measuring the stomata in cassava (Manihot esculenta Crantz) under multiple abiotic stresses
- Fosinopril inhibits Ang II-induced VSMC proliferation, phenotype transformation, migration, and oxidative stress through the TGF-β1/Smad signaling pathway
- Antioxidant and antimicrobial activities of Salsola imbricata methanolic extract and its phytochemical characterization
- Bioengineering and Biotechnology
- Absorbable calcium and phosphorus bioactive membranes promote bone marrow mesenchymal stem cells osteogenic differentiation for bone regeneration
- New advances in protein engineering for industrial applications: Key takeaways
- An overview of the production and use of Bacillus thuringiensis toxin
- Research progress of nanoparticles in diagnosis and treatment of hepatocellular carcinoma
- Bioelectrochemical biosensors for water quality assessment and wastewater monitoring
- PEI/MMNs@LNA-542 nanoparticles alleviate ICU-acquired weakness through targeted autophagy inhibition and mitochondrial protection
- Unleashing of cytotoxic effects of thymoquinone-bovine serum albumin nanoparticles on A549 lung cancer cells
- Erratum
- Erratum to “Investigating the association between dietary patterns and glycemic control among children and adolescents with T1DM”
- Erratum to “Activation of hypermethylated P2RY1 mitigates gastric cancer by promoting apoptosis and inhibiting proliferation”
- Retraction
- Retraction to “MiR-223-3p regulates cell viability, migration, invasion, and apoptosis of non-small cell lung cancer cells by targeting RHOB”
- Retraction to “A data mining technique for detecting malignant mesothelioma cancer using multiple regression analysis”
- Special Issue on Advances in Neurodegenerative Disease Research and Treatment
- Transplantation of human neural stem cell prevents symptomatic motor behavior disability in a rat model of Parkinson’s disease
- Special Issue on Multi-omics
- Inflammasome complex genes with clinical relevance suggest potential as therapeutic targets for anti-tumor drugs in clear cell renal cell carcinoma
- Gastroesophageal varices in primary biliary cholangitis with anti-centromere antibody positivity: Early onset?