Screening of different growth conditions of Bacillus subtilis isolated from membrane-less microbial fuel cell toward antimicrobial activity profiling
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Dharni Kuhan Sreedharan
, Tan Joo Shun
Abstract
Bacteriocins produced by Bacillus subtilis have gained recognition for their safe use in humans. In this study, we aimed to assess the inhibitory activity of an antimicrobial peptide synthesized by the wild-type strain of B. subtilis against the notorious pathogen Pseudomonas aeruginosa. Our investigation employed the broth microdilution method to evaluate the inhibitory potential of this peptide. Among the four different pathogen strains tested, P. aeruginosa exhibited the highest susceptibility, with an inhibition rate of 29.62%. In parallel, we explored the cultivation conditions of B. subtilis, recognizing the potential of this versatile bacterium for applications beyond antimicrobial production. The highest inhibitory activity was achieved at pH 8, with an inhibition rate of 20.18%, indicating the potential for optimizing pH conditions for enhanced antimicrobial peptide production. For the kinetics of peptide production, the study explored different incubation periods and agitation levels. Remarkably, the highest activity of B. subtilis was observed at 24 h of incubation, with an inhibition rate of 44.93%. Finally, the study focused on the isolation of the antimicrobial peptide from the cell-free supernatant of B. subtilis using ammonium sulfate precipitation at various concentrations. The highest recorded activity was an impressive 89.72% achieved at an 80% concentration.
Graphical abstract

1 Introduction
In this current age, demand for antibiotics is accelerating at an alarming rate, especially for the treatment of human-related disorders and growth facilitators, as well as in livestock husbandry. Antibiotics have been conventionally used for the treatment of human and animal infections. However, due to their adverse impact on the environment, these compounds are regarded as emerging contaminants [1,2]. Antibiotics consumed by both humans and animals do not experience any degradation during excretion [3,4]. Moreover, conventional wastewater treatment methods fail to effectively remove these compounds, which stay adhered to sludge. The activated sludge technique is currently used mostly by wastewater treatment facilities to meet the goals of denitrification and dephosphorization, although the antibiotics elimination rate is relatively poor [5].
This research shows that sludge is the main source of fluoroquinolones, and the application of biosolids to agricultural regions has the potential to discharge these compounds into the environment [6]. The presence of antibiotics, even in trace amounts, can promote the development of multidrug resistance genes in bacteria, acting as a selective pressure for microbial acclimation. As a result, the chances of a microorganism gaining such exposure and surviving are likely to promote the horizontal transfer of genes between the microbes. Pseudomonas aeruginosa is one such pathogen that can be found in wastewater effluent, and due to its innate resistance to various antibiotics, P. aeruginosa is able to withstand and survive in wastewater for an extended period of time [7,8].
Microbial fuel cell (MFC), a green technology, degrades organic compounds in wastewater using microorganisms as biocatalysts, converting chemical energy to bioelectrical electrical energy during this process [9,10]. For the MFC, various inoculum sources (food waste, lignocellulose material, anaerobic digester, or brewery sludge) were used, with the goal of adapting electroactive community of microbes and subsequent treatment of wastewater. Electroactive bacteria, also known as “electrogens,” are bacteria that can generate electricity. Geobacter, Shewanella, and Arcobacter genera are recognized as electrogens, but MFCs also contain other genera such as probiotics [11].
The rapid increase in antibiotic-resistant strains has prompted the development of alternative bacterial infection therapies. Bacteriocins are a heterogeneous class of bactericidal peptides or proteins produced by bacteria. Probiotics like lactic acid bacteria (LAB) are capable of producing an antimicrobial compound known as bacteriocin to inhibit closely related strains [12,13]. Bacteriocins are small cationic molecules with hydrophobic or amphiphilic properties that exhibit inhibitory activity against closely related species. Bacteriocins consist of a miscellaneous cluster of ribosomally synthesized peptides with <60 amino acid residues. However, unlike the bacteriocins from LAB, the classification of bacteriocins generated by Bacillus is scanty. Bacillus species have been recognized to be safe for food and industry, and many bacteriocin-producing bacteria have been used as probiotics. Bacteriocins synthesized by Bacillus subtilis garnered the highest popularity in various applications due to their safe application in humans [14,15]. Industrially significant bacteriocin is produced by several Bacillus species and has attained generally recognized as safe status due to the history of their safe application [16]. Therefore, bacteriocins are gaining demand to replace the use of antibiotics. The natural bioactive peptides or bacteriocins produced from Bacillus species prevent food spoilage by inhibiting the activity of pathogens and are beneficial for consumer health and industrial applications.
Therefore, the present investigation was carried out to screen the suppressing action of an antimicrobial compound synthesized by a wild-type B. subtilis strain in a membrane-less MFC (ML-MFC) system against the locally isolated pathogen, P. aeruginosa ATCC 10145, and partially purify the antimicrobial compound for potential usage in bioremediation. ML-MFC commonly regarded as a green technology for renewable energy generation and bioremediation only, but without realized the biocatalyst that was used (in this study was B. subtilis) had another potential which having an antimicrobial properties. This contributes to a new finding that caters to energy recovery, bioremediation, and health perspectives.
2 Methodology
2.1 Cultivation and culture conditions of B. subtilis
The wild type of B. subtilis used in this study was isolated from the ML-MFC supplemented with chicken manure explored by our research team as per the procedure of Mohd Azmi et al. [17]. The isolated strain was activated again in nutrient broth (NB) for 24 h at 37°C. The overnight culture was subcultured twice before the stock culture was prepared. The stock culture was kept in 25% glycerol at −80°C (St. Louis, Missouri, USA) as per the procedure of Sharma et al. [18].
2.2 Antimicrobial activity screening of B. subtilis
The culture of B. subtilis was grown overnight in two different NB and tryptic soy broth (TSB) media in the ML-MFC system. Nutrient supplementation leads to power generation (as B. subtilis is an electrogenic bacteria that has the ability to pass electrons and current and into the system), but the study aimed for antimicrobial activity as a priority. Then, B. subtilis culture was centrifuged at 8,000 g at 4°C for 20 min. The pellet was removed, and the supernatant was filtered by applying a filter membrane (0.22 µm; Minisart®, Sartorius) to ensure no traces of B. subtilis culture in the supernatant. A few different pathogens like Escherichia coli 078:K80 (gram negative), Staphylococcus aureus (gram positive), and P. aeruginosa (gram negative) were applied as indicator organisms to determine the antimicrobial activity of B. subtilis. Pathogens were developed overnight at 37°C in NB medium and diluted to 106 colony forming units. The activity was tested using broth microdilution assay in a 96-well plate. The broth microdilution method was executed as given by Sreedharan et al. [19]. The pathogen suspension (100 µL) was inoculated together with 100 µL of cell-free supernatants (CFS) in the well. De man, rogosa, sharpe (MRS) broth replaces the CFS for the negative control, while streptomycin (10 mg mL−1) functions as a positive control. The culture turbidity was analyzed at 596 nm after 24 h of incubation at 37°C. The following equation was used for analyses of the inhibitory action of CFS:
The absorbance of control shows changes in control (pathogens mixed with MRS broth), and the optimal density of the sample reflects alterations in sample absorbance (pathogens mixed with CFS).
2.3 Influence of various growth media and pH
The impact of growth media on the inhibition activity of CFS was investigated by culturing B. subtilis in eight different specialized growth media in the ML-MFC system. The growth media were Brain–heart infusion (BHI) broth, Luria Bertani (LB) broth, and TSB added with 1% yeast extract (TSB + YE), tryptone-yeast extract (TY) broth, NB broth, yeast malt extract (YME) broth, Mueller Hinton (MH) broth, and complex medium (Landy media [20] and nutrient medium [N 3] [21]). Both complex media were prepared accordingly, as suggested by Fuchs et al. [20] and Todorova and Kozhuharova [21]. Overnight cultivated B. subtilis culture was introduced into the prepared media and incubated at 37°C for 1 day. The next day, cultures were spun at 8,000 g for 20 min at 4°C to retrieve the CFS before being tested with a broth microdilution assay against P. aeruginosa to determine the antimicrobial activity [22,23]. The influence of pH on the supernatant of B. subtilis was studied by maintaining the pH of NB from pH 4 to pH 8 in the ML-MFC system. pH was maintained by using 1 N hydrochloric acid or sodium hydroxide. Cultured B. subtilis was inoculated into pH-adjusted NB and incubated at 37°C for 24 h. Then, the culture was centrifuged to harvest the CFS 8,000 g at 4°C for 20 min, subsequently tested its antimicrobial activity using broth microdilution assay [24].
2.4 Influence of incubating temperature
The impact of temperature on the inhibitory activity of B. subtilis was assessed by incubating at different temperatures in the ML-MFC system. Cultured B. subtilis was inoculated into NB and incubated at three different temperatures, i.e., 25, 30, and 45°C, for 1 day. CFS was obtained after centrifugation of culture for 20 min at 8,000 g and 4°C The antimicrobial activity exhibited by the CFS of B. subtilis was tested using broth microdilution method. The results were observed and tabulated after 24 h of incubation [25].
2.5 Effect of different incubation time
The influence of the incubation period was investigated by incubating B. subtilis for a span of 3 days in the ML-MFC system. B. subtilis 1% (v/v) was transferred to NB medium and incubated for 3 days at 37°C. B. subtilis culture was sampled at every 24 h during the 3-day period. The cultures were filtered after centrifugation for CFS, and the inhibition activity was calculated using broth microdilution assay with P. aeruginosa as the indicator strain [26].
2.6 Influence of agitation
The importance of agitation toward the inhibition activity of CFS was investigated by comparing the CFS activity from B. subtilis culture in the presence and absence of agitation in the ML-MFC system. B. subtilis (1%) culture was mixed into two separate NBs, with one culture shaken at 150 rpm while the other media was not shaken. Both cultures were placed for 24 h at 37°C. The next day, CFS of the cultures were obtained by centrifugation for 20 min at 8,000 g, and the inhibition activity was determined through broth microdilution assay. The inhibition activity results were observed and tabulated after 24 h of incubation [27].
2.7 Ammonium sulfate precipitation
The antimicrobial compound in the CFS of B. subtilis was extracted using the ammonium sulfate precipitation technique to determine whether the compound produced by B. subtilis is of proteinaceous nature. This method involves using ammonium sulfate salts to concentrate the protein present in the CFS. Different concentrations of ammonium sulfate were used from 20 to 80% w/v. B. subtilis culture was cultivated in 500 mL of NB with the pH adjusted to pH 5 for 1 day at 37°C. CFS was obtained by centrifuging culture at 8,000 g for 20 min. Upon harvesting the CFS, ammonium sulfate (20, 40, 60, and 80% w/v) was supplemented into CFS and stirred homogenously. The CFS was kept at 4°C for at least 2 h to allow the salts to congregate the protein before centrifuging it at 8,000 g for 15 min. Filtrate was removed, and the pellet was resuspended with 1 mL of phosphate buffered saline. The antimicrobial activity of the extracted protein was tested by broth microdilution method against P. aeruginosa [28].
2.8 Statistical analysis
Data were assessed using SPSS version 22.0 (IBM, New York, USA). The significant difference between the means was assessed by one-way ANOVA. The significance level was set at α = 0.05, and Tukey’s test was used for data analyses.
3 Results
Based on Figure 1, CFS antimicrobial activity produced by B. subtilis generated in NB media recorded higher activity for all the pathogens tested in comparison to the CFS from a similar strain but grown in TSB media. Among the three pathogens tested, the maximum recorded antimicrobial activity of CFS from NB was against P. aeruginosa at 29.62%, followed by E. coli 078:K80 at 7.62%, and the lowest activity at 2.61% from S. aureus. Meanwhile, the highest activity recorded for the CFS grown in TSB broth was also against P. aeruginosa at 13.93%, while only 0.34% of activity was obtained against S. aureus, and no activity was registered when tested against E. coli 078:K80. The antimicrobial activity of CFS from NB against P. aeruginosa was significantly (p < 0.05) high in comparison to the activity of CFS from TSB by 16.32%. The activity of CFS from NB was also higher compared to TSB against the pathogens E. coli 078:K80 and S. aureus by 7.62 and 1.97%, respectively, but with no significant difference. Hence, the antimicrobial compound released by B. subtilis in NB certainly has exhibited better antimicrobial properties compared to the ones produced from TSB.

The antimicrobial activity of CFS from B. subtilis produced in two different media (NB and TSB). The activity was tested against three different pathogens (E. coli 078:K80, S. aureus, and P. aeruginosa). Streptomycin sulfate acts as a positive control. A,B,CDifferent superscript shows that the quantity is significantly different (p < 0.05).
Nine different specialized media were prepared with the purpose of producing CFS with higher antimicrobial activity against indicator strain P. aeruginosa. Based on the results tabulated in Figure 2, five of the nine media investigated exhibited activity. The highest antimicrobial activity recorded was from CFS produced in NB media at 29.62%, followed by CFS from TY media at 17.26% and YME media at 6.12%. The other two activities recorded were from LB and TSB + YE media, with low activity at 0.28 and 0.87%, respectively. However, no activity was recorded for CFS from BHI, MH, Landy media, and N 3 media. The antimicrobial activity from NB media was high (p < 0.05) in comparison to other eight media investigated. Therefore, NB was retained as the growth medium of choice.
![Figure 2
Antimicrobial activity of CFS from B. subtilis generated in eight different media (BHI broth, LB broth, [TSB + YE] broth, TY broth, NB broth, YME broth, MH broth, Landy media, and N 3 media). The activity of CFS was tested against P. aeruginosa. A,B,CDifferent superscript shows that the quantity is significantly varied (p < 0.05).](/document/doi/10.1515/biol-2022-0809/asset/graphic/j_biol-2022-0809_fig_002.jpg)
Antimicrobial activity of CFS from B. subtilis generated in eight different media (BHI broth, LB broth, [TSB + YE] broth, TY broth, NB broth, YME broth, MH broth, Landy media, and N 3 media). The activity of CFS was tested against P. aeruginosa. A,B,CDifferent superscript shows that the quantity is significantly varied (p < 0.05).
In the present investigation, the pH of media was investigated from pH 4 to pH 8. Based on Figure 3, an increasing trend can be observed. The highest activity was observed at pH 8 at 18.03% and is significantly highest (p < 0.05), while the lowest recorded was from pH 4 at 2.73% with a difference margin of 15.3%. The other activities obtained from pH 5, 6, and 7 were 7.01, 13.78, and 12.06%. This investigation highlighted the importance of pH influence on antimicrobial activity.

The antimicrobial activity of CFS from B. subtilis was tested against P. aeruginosa under different pH ranges. A,BDifferent superscript shows that the quantity is significantly different (p < 0.05).
The influence of incubation temperature on antimicrobial activity was also studied by incubating growing B. subtilis at three different temperatures, i.e., 25, 30, and 45°C. As per the results shown in Figure 4, the inhibitory activity for the three different temperatures was 8.93, 4.31, and 4.95% with no significant difference. Moreover, the incubation period of B. subtilis was also monitored. The CFS was extracted from B. subtilis every 24 h for a period of 24–72 h. Based on the results tabulated in Figure 5, the antimicrobial activity of CFS toward P. aeruginosa scored the highest at 24 h, followed by 48 h with 26.46%, and finally the lowest activity at 72 h with activity of 29.5%. The highest antimicrobial activity was produced after a 24 h incubation period, indicating a clear downward trend in activity. This study concluded that incubating B. subtilis longer than 24 h did not influence the antimicrobial activity.

Antimicrobial activity of CFS of B. subtilis tested at different temperatures against P. aeruginosa. ASuperscript shows quantities that are not significantly different (p > 0.05).

The antimicrobial activity of CFS of B. subtilis tested at different incubation periods against P. aeruginosa.
The impact of agitation toward the antimicrobial activity of CFS was also observed during the cultivation of B. subtilis. Based on the result obtained in Figure 6, CFS antimicrobial activity generated by B. subtilis was not influenced by agitation. Culture without agitation scored 10.74% of activity; meanwhile, culture with the presence of agitation scored 1.73% lower antimicrobial activity. Hence, this study proved that agitation is not one of the primary factors governing the antimicrobial activity of the CFS produced. The final investigation carried out was to test the proteinaceous nature of the antimicrobial peptides.

“Without” indicates B. subtilis grown without agitation, whereas “With” shows B. subtilis culture agitated overnight at 150 rpm. The activity of CFS was tested against P. aeruginosa.
Based on the results in Figure 7, four different ammonium sulfate concentrations were used to carry out this study. The presence of activity was observed at 60 and 80% concentration with the highest recorded at 80%. Meanwhile, no antimicrobial activity was recorded for 20 and 40% ammonium sulfate concentration. The recorded activity for 60 and 80% concentration was 33.96 and 89.72%, respectively. The activity recorded at 89.72% is significantly higher (p < 0.05) than the rest of the ammonium sulfate concentrations. The presence of antimicrobial activity of ammonium sulfate proves the proteinaceous nature of CFS.

The extracted protein from the CFS at different ammonium sulfate concentrations was tested for its antimicrobial activity against P. aeruginosa. A,B,CDifferent superscript reflects that the quantity is significantly different (p < 0.05).
4 Discussion
Antimicrobial resistance is imposing a serious threat to global health. Antimicrobial peptides are rapidly gaining attention for their clinical potential as they have advantages over traditional antibiotics. The antimicrobial peptides synthesized by B. subtilis showed a pivotal role in the innate immune system. The antimicrobial activity of CFS from B. subtilis had been well documented in various studies. Zhang et al. [29] described the use of CFS produced by B. subtilis to effectively reduce biofilm formation of S. aureus while reducing its resistance toward antibiotics such as penicillin and gentamicin. The CFS had particularly adjusted the structure of S. aureus membrane, making it easily penetrable. Islam et al. [30] also reported the antimicrobial effectiveness of CFS from B. subtilis against biofilm production of P. aeruginosa. The CFS successfully blocked the biofilm-formation protein (PDB ID: 7M1M) of P. aeruginosa, which reduced its biofilm production by 50%.
In this study, among the pathogenic strains tested, the CFS of B. subtilis produced the highest antimicrobial activity against P. aeruginosa, which is a gram-negative bacteria. Antimicrobial compounds generated by gram-positive bacteria are efficient at targeting the same type of bacteria [31], but the activity of CFS of B. subtilis has a broad inhibitory spectrum since it is effective in inhibiting both gram-positive and gram-negative bacteria. Several studies have stated a broad spectrum of B. subtilis antibacterial activity, for instance, B. subtilis RLID 12.1. Antimicrobial compound generated by particular strain was capable of inhibiting 28 different indicator strains tested, consisting of both gram-positive and gram-negative bacteria and pathogenic yeast [32]. Another similar study by Xie et al. [33] also highlighted the wide spectrum of inhibition of B. subtilis LFB112. Bacteriocin produced was able to check 21 different strains, including yeast and gram-positive and gram-negative bacteria. The antimicrobial peptides kill pathogens by either disrupting their membrane or by entering inside bacterial cells to interact with intracellular components.
NB is a better media for antimicrobial compound production among the nine media tested, which is attributed to the composition of the NB media. The higher nitrogen source content, YE, and beef extract facilitated the biosynthesis of antimicrobial compound. Motta and Brandelli [34] also described the importance of source of nitrogen for bacteriocin generation. Bacteriocin synthesis from Bacillus sp. P34 strain achieved its maximal activity at 3,200 AU mL–1 when cultivated in cheese whey. Khalili Samani et al. [35] described the importance of nitrogen source in the production of bacteriocin. The addition of YE in that particular study elevated the bacteriocin synthesis of B. subtilis SB1.
Contrary to most Bacillus bacteriocin, this strain operates better at an alkaline pH. The activity recorded was higher in the range from pH 6 to pH 8, with the significantly highest activity achieved at pH 8. Similar findings were reported by Anthony et al. [36]; the bacteriocin production from Bacillus licheniformis AnBa9 favored the alkaline pH, and the maximal production was achieved at pH 8. Shayesteh et al. [37] reported that Bacillus sp. Sh10 also recorded the highest maximal bacteriocin production at pH 8 when tested between pH 4 and pH 11.
Temperature was the least significant factor in the production of antimicrobial compound. No significant changes were recorded in the activity. However, the highest activity recorded was at 25°C, which was lower than its optimal growth temperature of 37°C. Many studies have observed this similar occurrence, whereby higher bacteriocin activity was recorded at suboptimal temperature [38,39]. The optimal temperature range for bacteriocin production was stated to be in the range between 26 and 37°C [40].
The incubation period profile indicated that the antimicrobial activity was maximal at 24 h and gradually decreased thereafter. Bac-SM01 achieved the highest production at 24 h and stated that incubation time is an important factor in bacteriocin production [41]. Similarly, bacteriocin from Bacillus sp. P45 isolated from Piaractus mesopotamicus also reported maximal bacteriocin production till 30 h [42]. A longer incubation period leads to the antimicrobial compound adhering to the producer cell surface, thus reducing its efficiency [43].
In this study, agitation did not influence the production of antimicrobial activity. However, contrary to other studies, agitation was impactful in bacteriocin production. Higher subtilosin A activity was recorded when the agitation speed was increased [27]. Hyun et al. [44] also highlighted the importance of agitation in the BLIS BSC35 activity synthesized by B. subtilis BSC35. An increasing trend of antimicrobial activity was recorded after an increase in agitation speed.
In this study, 80% ammonium sulfate concentration recorded the highest antimicrobial activity. A few studies also reported similar findings. The BLIS-produced B. subtilis BS15 was extracted by 80% saturation of ammonium sulfate [45]. Another study conducted by Cherif et al. [46] also successfully precipitated entomocin 110 generated by Bacillus thuringiensis subsp. Entomocidus HD110 at 80% saturation. The precipitation of bacteriocin from B. subtilis LFB112 was recorded with 80% saturation of ammonium sulfate [33]. Thus, isolated B. subtilis showed maximum production of antimicrobial compound, which can be further used for industrial applications [47].
5 Conclusions
B. subtilis strain can not only act as a biocatalyst in ML-MFC for bioremediation and recovery of energy but is also capable of producing antimicrobial peptide compound. Due to the inhibitory activity of the antimicrobial peptide produced from B. subtilis against P. aeruginosa, further applications of B. subtilis can be explored in the biocontrol of drug-resistant pathogens. The isolated B. subtilis was grown best on nutrient media at pH 5 when incubated at 37°C for 1 day and ensured maximal production of antimicrobial compound from B. subtilis. An antimicrobial compound is of proteinaceous nature as its nature was confirmed through the precipitation of protein using ammonium sulfate. Hence, findings in this study showcased new values for ML-MFC not just solely for bioremediation and recovery of energy but also due to the presence of high-value antimicrobial compound, which can be further purified for future research.
Acknowledgements
The authors would like to thank the Ministry of Higher Education Malaysia under the Fundamental Research Grant Scheme (FRGS/1/2019/STG05/USM/02/18). The authors are grateful to the Researchers Supporting Project Number (RSP2023R326), King Saud University, Riyadh, Saudi Arabia.
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Funding information: Ministry of Higher Education Malaysia under the Fundamental Research Grant Scheme (FRGS/1/2019/STG05/USM/02/18). The authors are grateful to the Researchers Supporting Project Number (RSP2023R326), King Saud University, Riyadh, Saudi Arabia.
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Author contributions: D.K.S.: conceptualization and writing – original draft preparation. H.A.: methodology and supervision. M.M.Z.M.: conceptualization, supervision, and funding acquisition. T.J.S.: conceptualization, methodology, and supervision. A.M.A.M.: conceptualization, methodology, and supervision. H.S.: data analysis. M.R.S.: writing – review & editing. M.A.: writing – review & editing. R.T.K.: writing – review & editing. M.R.: writing – review & editing and funding acquisition.
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Conflict of interest: Authors state no conflict of interest.
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Data availability statement: The datasets generated during and/or analyzed during the current study are available from the corresponding author on reasonable request.
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This work is licensed under the Creative Commons Attribution 4.0 International License.
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Articles in the same Issue
- Biomedical Sciences
- Constitutive and evoked release of ATP in adult mouse olfactory epithelium
- LARP1 knockdown inhibits cultured gastric carcinoma cell cycle progression and metastatic behavior
- PEGylated porcine–human recombinant uricase: A novel fusion protein with improved efficacy and safety for the treatment of hyperuricemia and renal complications
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- Effectiveness and safety of a mumps containing vaccine in preventing laboratory-confirmed mumps cases from 2002 to 2017: A meta-analysis
- Low levels of sex hormone-binding globulin predict an increased breast cancer risk and its underlying molecular mechanisms
- A case of Trousseau syndrome: Screening, detection and complication
- Application of the integrated airway humidification device enhances the humidification effect of the rabbit tracheotomy model
- Preparation of Cu2+/TA/HAP composite coating with anti-bacterial and osteogenic potential on 3D-printed porous Ti alloy scaffolds for orthopedic applications
- Aquaporin-8 promotes human dermal fibroblasts to counteract hydrogen peroxide-induced oxidative damage: A novel target for management of skin aging
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- Single-nucleotide polymorphism rs2910829 in PDE4D is related to stroke susceptibility in Chinese populations: The results of a meta-analysis
- Pheochromocytoma-induced myocardial infarction: A case report
- Kaempferol regulates apoptosis and migration of neural stem cells to attenuate cerebral infarction by O‐GlcNAcylation of β-catenin
- Sirtuin 5 regulates acute myeloid leukemia cell viability and apoptosis by succinylation modification of glycine decarboxylase
- Apigenin 7-glucoside impedes hypoxia-induced malignant phenotypes of cervical cancer cells in a p16-dependent manner
- KAT2A changes the function of endometrial stromal cells via regulating the succinylation of ENO1
- Current state of research on copper complexes in the treatment of breast cancer
- Exploring antioxidant strategies in the pathogenesis of ALS
- Helicobacter pylori causes gastric dysbacteriosis in chronic gastritis patients
- IL-33/soluble ST2 axis is associated with radiation-induced cardiac injury
- The predictive value of serum NLR, SII, and OPNI for lymph node metastasis in breast cancer patients with internal mammary lymph nodes after thoracoscopic surgery
- Carrying SNP rs17506395 (T > G) in TP63 gene and CCR5Δ32 mutation associated with the occurrence of breast cancer in Burkina Faso
- P2X7 receptor: A receptor closely linked with sepsis-associated encephalopathy
- Probiotics for inflammatory bowel disease: Is there sufficient evidence?
- Identification of KDM4C as a gene conferring drug resistance in multiple myeloma
- Microbial perspective on the skin–gut axis and atopic dermatitis
- Thymosin α1 combined with XELOX improves immune function and reduces serum tumor markers in colorectal cancer patients after radical surgery
- Highly specific vaginal microbiome signature for gynecological cancers
- Sample size estimation for AQP4-IgG seropositive optic neuritis: Retinal damage detection by optical coherence tomography
- The effects of SDF-1 combined application with VEGF on femoral distraction osteogenesis in rats
- Fabrication and characterization of gold nanoparticles using alginate: In vitro and in vivo assessment of its administration effects with swimming exercise on diabetic rats
- Mitigating digestive disorders: Action mechanisms of Mediterranean herbal active compounds
- Distribution of CYP2D6 and CYP2C19 gene polymorphisms in Han and Uygur populations with breast cancer in Xinjiang, China
- VSP-2 attenuates secretion of inflammatory cytokines induced by LPS in BV2 cells by mediating the PPARγ/NF-κB signaling pathway
- Factors influencing spontaneous hypothermia after emergency trauma and the construction of a predictive model
- Long-term administration of morphine specifically alters the level of protein expression in different brain regions and affects the redox state
- Application of metagenomic next-generation sequencing technology in the etiological diagnosis of peritoneal dialysis-associated peritonitis
- Clinical diagnosis, prevention, and treatment of neurodyspepsia syndrome using intelligent medicine
- Case report: Successful bronchoscopic interventional treatment of endobronchial leiomyomas
- Preliminary investigation into the genetic etiology of short stature in children through whole exon sequencing of the core family
- Cystic adenomyoma of the uterus: Case report and literature review
- Mesoporous silica nanoparticles as a drug delivery mechanism
- Dynamic changes in autophagy activity in different degrees of pulmonary fibrosis in mice
- Vitamin D deficiency and inflammatory markers in type 2 diabetes: Big data insights
- Lactate-induced IGF1R protein lactylation promotes proliferation and metabolic reprogramming of lung cancer cells
- Meta-analysis on the efficacy of allogeneic hematopoietic stem cell transplantation to treat malignant lymphoma
- Mitochondrial DNA drives neuroinflammation through the cGAS-IFN signaling pathway in the spinal cord of neuropathic pain mice
- Application value of artificial intelligence algorithm-based magnetic resonance multi-sequence imaging in staging diagnosis of cervical cancer
- Embedded monitoring system and teaching of artificial intelligence online drug component recognition
- Investigation into the association of FNDC1 and ADAMTS12 gene expression with plumage coloration in Muscovy ducks
- Yak meat content in feed and its impact on the growth of rats
- A rare case of Richter transformation with breast involvement: A case report and literature review
- First report of Nocardia wallacei infection in an immunocompetent patient in Zhejiang province
- Rhodococcus equi and Brucella pulmonary mass in immunocompetent: A case report and literature review
- Downregulation of RIP3 ameliorates the left ventricular mechanics and function after myocardial infarction via modulating NF-κB/NLRP3 pathway
- Evaluation of the role of some non-enzymatic antioxidants among Iraqi patients with non-alcoholic fatty liver disease
- The role of Phafin proteins in cell signaling pathways and diseases
- Ten-year anemia as initial manifestation of Castleman disease in the abdominal cavity: A case report
- Coexistence of hereditary spherocytosis with SPTB P.Trp1150 gene variant and Gilbert syndrome: A case report and literature review
- Utilization of convolutional neural networks to analyze microscopic images for high-throughput screening of mesenchymal stem cells
- Exploratory evaluation supported by experimental and modeling approaches of Inula viscosa root extract as a potent corrosion inhibitor for mild steel in a 1 M HCl solution
- Imaging manifestations of ductal adenoma of the breast: A case report
- Gut microbiota and sleep: Interaction mechanisms and therapeutic prospects
- Isomangiferin promotes the migration and osteogenic differentiation of rat bone marrow mesenchymal stem cells
- Prognostic value and microenvironmental crosstalk of exosome-related signatures in human epidermal growth factor receptor 2 positive breast cancer
- Circular RNAs as potential biomarkers for male severe sepsis
- Knockdown of Stanniocalcin-1 inhibits growth and glycolysis in oral squamous cell carcinoma cells
- The expression and biological role of complement C1s in esophageal squamous cell carcinoma
- A novel GNAS mutation in pseudohypoparathyroidism type 1a with articular flexion deformity: A case report
- Predictive value of serum magnesium levels for prognosis in patients with non-small cell lung cancer undergoing EGFR-TKI therapy
- HSPB1 alleviates acute-on-chronic liver failure via the P53/Bax pathway
- IgG4-related disease complicated by PLA2R-associated membranous nephropathy: A case report
- Baculovirus-mediated endostatin and angiostatin activation of autophagy through the AMPK/AKT/mTOR pathway inhibits angiogenesis in hepatocellular carcinoma
- Metformin mitigates osteoarthritis progression by modulating the PI3K/AKT/mTOR signaling pathway and enhancing chondrocyte autophagy
- Evaluation of the activity of antimicrobial peptides against bacterial vaginosis
- Atypical presentation of γ/δ mycosis fungoides with an unusual phenotype and SOCS1 mutation
- Analysis of the microecological mechanism of diabetic kidney disease based on the theory of “gut–kidney axis”: A systematic review
- Omega-3 fatty acids prevent gestational diabetes mellitus via modulation of lipid metabolism
- Refractory hypertension complicated with Turner syndrome: A case report
- Interaction of ncRNAs and the PI3K/AKT/mTOR pathway: Implications for osteosarcoma
- Association of low attenuation area scores with pulmonary function and clinical prognosis in patients with chronic obstructive pulmonary disease
- Long non-coding RNAs in bone formation: Key regulators and therapeutic prospects
- The deubiquitinating enzyme USP35 regulates the stability of NRF2 protein
- Neutrophil-to-lymphocyte ratio and platelet-to-lymphocyte ratio as potential diagnostic markers for rebleeding in patients with esophagogastric variceal bleeding
- G protein-coupled receptor 1 participating in the mechanism of mediating gestational diabetes mellitus by phosphorylating the AKT pathway
- LL37-mtDNA regulates viability, apoptosis, inflammation, and autophagy in lipopolysaccharide-treated RLE-6TN cells by targeting Hsp90aa1
- The analgesic effect of paeoniflorin: A focused review
- Chemical composition’s effect on Solanum nigrum Linn.’s antioxidant capacity and erythrocyte protection: Bioactive components and molecular docking analysis
- Knockdown of HCK promotes HREC cell viability and inner blood–retinal barrier integrity by regulating the AMPK signaling pathway
- The role of rapamycin in the PINK1/Parkin signaling pathway in mitophagy in podocytes
- Laryngeal non-Hodgkin lymphoma: Report of four cases and review of the literature
- Clinical value of macrogenome next-generation sequencing on infections
- Overview of dendritic cells and related pathways in autoimmune uveitis
- TAK-242 alleviates diabetic cardiomyopathy via inhibiting pyroptosis and TLR4/CaMKII/NLRP3 pathway
- Hypomethylation in promoters of PGC-1α involved in exercise-driven skeletal muscular alterations in old age
- Profile and antimicrobial susceptibility patterns of bacteria isolated from effluents of Kolladiba and Debark hospitals
- The expression and clinical significance of syncytin-1 in serum exosomes of hepatocellular carcinoma patients
- A histomorphometric study to evaluate the therapeutic effects of biosynthesized silver nanoparticles on the kidneys infected with Plasmodium chabaudi
- PGRMC1 and PAQR4 are promising molecular targets for a rare subtype of ovarian cancer
- Analysis of MDA, SOD, TAOC, MNCV, SNCV, and TSS scores in patients with diabetes peripheral neuropathy
- SLIT3 deficiency promotes non-small cell lung cancer progression by modulating UBE2C/WNT signaling
- The relationship between TMCO1 and CALR in the pathological characteristics of prostate cancer and its effect on the metastasis of prostate cancer cells
- Heterogeneous nuclear ribonucleoprotein K is a potential target for enhancing the chemosensitivity of nasopharyngeal carcinoma
- PHB2 alleviates retinal pigment epithelium cell fibrosis by suppressing the AGE–RAGE pathway
- Anti-γ-aminobutyric acid-B receptor autoimmune encephalitis with syncope as the initial symptom: Case report and literature review
- Comparative analysis of chloroplast genome of Lonicera japonica cv. Damaohua
- Human umbilical cord mesenchymal stem cells regulate glutathione metabolism depending on the ERK–Nrf2–HO-1 signal pathway to repair phosphoramide mustard-induced ovarian cancer cells
- Electroacupuncture on GB acupoints improves osteoporosis via the estradiol–PI3K–Akt signaling pathway
- Renalase protects against podocyte injury by inhibiting oxidative stress and apoptosis in diabetic nephropathy
- Review: Dicranostigma leptopodum: A peculiar plant of Papaveraceae
- Combination effect of flavonoids attenuates lung cancer cell proliferation by inhibiting the STAT3 and FAK signaling pathway
- Renal microangiopathy and immune complex glomerulonephritis induced by anti-tumour agents: A case report
- Correlation analysis of AVPR1a and AVPR2 with abnormal water and sodium and potassium metabolism in rats
- Gastrointestinal health anti-diarrheal mixture relieves spleen deficiency-induced diarrhea through regulating gut microbiota
- Myriad factors and pathways influencing tumor radiotherapy resistance
- Exploring the effects of culture conditions on Yapsin (YPS) gene expression in Nakaseomyces glabratus
- Screening of prognostic core genes based on cell–cell interaction in the peripheral blood of patients with sepsis
- Coagulation factor II thrombin receptor as a promising biomarker in breast cancer management
- Ileocecal mucinous carcinoma misdiagnosed as incarcerated hernia: A case report
- Methyltransferase like 13 promotes malignant behaviors of bladder cancer cells through targeting PI3K/ATK signaling pathway
- The debate between electricity and heat, efficacy and safety of irreversible electroporation and radiofrequency ablation in the treatment of liver cancer: A meta-analysis
- ZAG promotes colorectal cancer cell proliferation and epithelial–mesenchymal transition by promoting lipid synthesis
- Baicalein inhibits NLRP3 inflammasome activation and mitigates placental inflammation and oxidative stress in gestational diabetes mellitus
- Impact of SWCNT-conjugated senna leaf extract on breast cancer cells: A potential apoptotic therapeutic strategy
- MFAP5 inhibits the malignant progression of endometrial cancer cells in vitro
- Major ozonated autohemotherapy promoted functional recovery following spinal cord injury in adult rats via the inhibition of oxidative stress and inflammation
- Axodendritic targeting of TAU and MAP2 and microtubule polarization in iPSC-derived versus SH-SY5Y-derived human neurons
- Differential expression of phosphoinositide 3-kinase/protein kinase B and Toll-like receptor/nuclear factor kappa B signaling pathways in experimental obesity Wistar rat model
- The therapeutic potential of targeting Oncostatin M and the interleukin-6 family in retinal diseases: A comprehensive review
- BA inhibits LPS-stimulated inflammatory response and apoptosis in human middle ear epithelial cells by regulating the Nf-Kb/Iκbα axis
- Role of circRMRP and circRPL27 in chronic obstructive pulmonary disease
- Investigating the role of hyperexpressed HCN1 in inducing myocardial infarction through activation of the NF-κB signaling pathway
- Characterization of phenolic compounds and evaluation of anti-diabetic potential in Cannabis sativa L. seeds: In vivo, in vitro, and in silico studies
- Quantitative immunohistochemistry analysis of breast Ki67 based on artificial intelligence
- Ecology and Environmental Science
- Screening of different growth conditions of Bacillus subtilis isolated from membrane-less microbial fuel cell toward antimicrobial activity profiling
- Degradation of a mixture of 13 polycyclic aromatic hydrocarbons by commercial effective microorganisms
- Evaluation of the impact of two citrus plants on the variation of Panonychus citri (Acari: Tetranychidae) and beneficial phytoseiid mites
- Prediction of present and future distribution areas of Juniperus drupacea Labill and determination of ethnobotany properties in Antalya Province, Türkiye
- Population genetics of Todarodes pacificus (Cephalopoda: Ommastrephidae) in the northwest Pacific Ocean via GBS sequencing
- A comparative analysis of dendrometric, macromorphological, and micromorphological characteristics of Pistacia atlantica subsp. atlantica and Pistacia terebinthus in the middle Atlas region of Morocco
- Macrofungal sporocarp community in the lichen Scots pine forests
- Assessing the proximate compositions of indigenous forage species in Yemen’s pastoral rangelands
- Food Science
- Gut microbiota changes associated with low-carbohydrate diet intervention for obesity
- Reexamination of Aspergillus cristatus phylogeny in dark tea: Characteristics of the mitochondrial genome
- Differences in the flavonoid composition of the leaves, fruits, and branches of mulberry are distinguished based on a plant metabolomics approach
- Investigating the impact of wet rendering (solventless method) on PUFA-rich oil from catfish (Clarias magur) viscera
- Non-linear associations between cardiovascular metabolic indices and metabolic-associated fatty liver disease: A cross-sectional study in the US population (2017–2020)
- Knockdown of USP7 alleviates atherosclerosis in ApoE-deficient mice by regulating EZH2 expression
- Utility of dairy microbiome as a tool for authentication and traceability
- Agriculture
- Enhancing faba bean (Vicia faba L.) productivity through establishing the area-specific fertilizer rate recommendation in southwest Ethiopia
- Impact of novel herbicide based on synthetic auxins and ALS inhibitor on weed control
- Perspectives of pteridophytes microbiome for bioremediation in agricultural applications
- Fertilizer application parameters for drip-irrigated peanut based on the fertilizer effect function established from a “3414” field trial
- Improving the productivity and profitability of maize (Zea mays L.) using optimum blended inorganic fertilization
- Application of leaf multispectral analyzer in comparison to hyperspectral device to assess the diversity of spectral reflectance indices in wheat genotypes
- Animal Sciences
- Knockdown of ANP32E inhibits colorectal cancer cell growth and glycolysis by regulating the AKT/mTOR pathway
- Development of a detection chip for major pathogenic drug-resistant genes and drug targets in bovine respiratory system diseases
- Exploration of the genetic influence of MYOT and MB genes on the plumage coloration of Muscovy ducks
- Transcriptome analysis of adipose tissue in grazing cattle: Identifying key regulators of fat metabolism
- Comparison of nutritional value of the wild and cultivated spiny loaches at three growth stages
- Transcriptomic analysis of liver immune response in Chinese spiny frog (Quasipaa spinosa) infected with Proteus mirabilis
- Disruption of BCAA degradation is a critical characteristic of diabetic cardiomyopathy revealed by integrated transcriptome and metabolome analysis
- Plant Sciences
- Effect of long-term in-row branch covering on soil microorganisms in pear orchards
- Photosynthetic physiological characteristics, growth performance, and element concentrations reveal the calcicole–calcifuge behaviors of three Camellia species
- Transcriptome analysis reveals the mechanism of NaHCO3 promoting tobacco leaf maturation
- Bioinformatics, expression analysis, and functional verification of allene oxide synthase gene HvnAOS1 and HvnAOS2 in qingke
- Water, nitrogen, and phosphorus coupling improves gray jujube fruit quality and yield
- Improving grape fruit quality through soil conditioner: Insights from RNA-seq analysis of Cabernet Sauvignon roots
- Role of Embinin in the reabsorption of nucleus pulposus in lumbar disc herniation: Promotion of nucleus pulposus neovascularization and apoptosis of nucleus pulposus cells
- Revealing the effects of amino acid, organic acid, and phytohormones on the germination of tomato seeds under salinity stress
- Combined effects of nitrogen fertilizer and biochar on the growth, yield, and quality of pepper
- Comprehensive phytochemical and toxicological analysis of Chenopodium ambrosioides (L.) fractions
- Impact of “3414” fertilization on the yield and quality of greenhouse tomatoes
- Exploring the coupling mode of water and fertilizer for improving growth, fruit quality, and yield of the pear in the arid region
- Metagenomic analysis of endophytic bacteria in seed potato (Solanum tuberosum)
- Antibacterial, antifungal, and phytochemical properties of Salsola kali ethanolic extract
- Exploring the hepatoprotective properties of citronellol: In vitro and in silico studies on ethanol-induced damage in HepG2 cells
- Enhanced osmotic dehydration of watermelon rind using honey–sucrose solutions: A study on pre-treatment efficacy and mass transfer kinetics
- Effects of exogenous 2,4-epibrassinolide on photosynthetic traits of 53 cowpea varieties under NaCl stress
- Comparative transcriptome analysis of maize (Zea mays L.) seedlings in response to copper stress
- An optimization method for measuring the stomata in cassava (Manihot esculenta Crantz) under multiple abiotic stresses
- Fosinopril inhibits Ang II-induced VSMC proliferation, phenotype transformation, migration, and oxidative stress through the TGF-β1/Smad signaling pathway
- Antioxidant and antimicrobial activities of Salsola imbricata methanolic extract and its phytochemical characterization
- Bioengineering and Biotechnology
- Absorbable calcium and phosphorus bioactive membranes promote bone marrow mesenchymal stem cells osteogenic differentiation for bone regeneration
- New advances in protein engineering for industrial applications: Key takeaways
- An overview of the production and use of Bacillus thuringiensis toxin
- Research progress of nanoparticles in diagnosis and treatment of hepatocellular carcinoma
- Bioelectrochemical biosensors for water quality assessment and wastewater monitoring
- PEI/MMNs@LNA-542 nanoparticles alleviate ICU-acquired weakness through targeted autophagy inhibition and mitochondrial protection
- Unleashing of cytotoxic effects of thymoquinone-bovine serum albumin nanoparticles on A549 lung cancer cells
- Erratum
- Erratum to “Investigating the association between dietary patterns and glycemic control among children and adolescents with T1DM”
- Erratum to “Activation of hypermethylated P2RY1 mitigates gastric cancer by promoting apoptosis and inhibiting proliferation”
- Retraction
- Retraction to “MiR-223-3p regulates cell viability, migration, invasion, and apoptosis of non-small cell lung cancer cells by targeting RHOB”
- Retraction to “A data mining technique for detecting malignant mesothelioma cancer using multiple regression analysis”
- Special Issue on Advances in Neurodegenerative Disease Research and Treatment
- Transplantation of human neural stem cell prevents symptomatic motor behavior disability in a rat model of Parkinson’s disease
- Special Issue on Multi-omics
- Inflammasome complex genes with clinical relevance suggest potential as therapeutic targets for anti-tumor drugs in clear cell renal cell carcinoma
- Gastroesophageal varices in primary biliary cholangitis with anti-centromere antibody positivity: Early onset?