Home Crystal structure of catena-poly[triaqua-(μ 2-1,3-di(1H-imidazol-1-yl)propane-κ 2 N:N′)-(4,4′-(1H-1,2,4-triazole-3,5-diyl)dibenzoato-κ 1 O)nickel(II)]N,N′-dimethylformamide (1/1), C28H35N8O8Ni
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Crystal structure of catena-poly[triaqua-(μ 2-1,3-di(1H-imidazol-1-yl)propane-κ 2 N:N′)-(4,4′-(1H-1,2,4-triazole-3,5-diyl)dibenzoato-κ 1 O)nickel(II)]N,N′-dimethylformamide (1/1), C28H35N8O8Ni

  • Fei Xi , Yan-Hong Gao , Bo Tang , Hong-Guang Ge , Qin Wang and Jiu-Fu Lu ORCID logo EMAIL logo
Published/Copyright: August 16, 2021

Abstract

C28H35N8O8Ni, monoclinic, P21/c (no. 14), a = 14.7476(15) Å, b = 19.6335(19) Å, c = 10.8116(11) Å, β = 104.334(2)°, V = 3033.0(5) Å3, Z = 4, R gt (F) = 0.0548, wR ref (F 2) = 0.0961, T = 293(2) K.

CCDC no.: 2090894

A part of the title polymeric structure is shown in the figure. Table 1 contains crystallographic data and Table 2 contains the list of the atoms including atomic coordinates and displacement parameters.

Figure 1: 
The asymmetric units of title coordination polymer.
Figure 1:

The asymmetric units of title coordination polymer.

Table 1:

Data collection and handling.

Crystal: Colourless block
Size: 0.26 × 0.22 × 0.17 mm
Wavelength: Mo Kα radiation (0.71073 Å)
μ: 0.70 mm−1
Diffractometer, scan mode: Bruker APEX-II, φ and ω
θ max, completeness: 25.3°, >99%
N(hkl)measured, N(hkl)unique, R int: 15,769, 5522, 0.073
Criterion for I obs, N(hkl)gt: I obs > 2 σ(I obs), 3303
N(param)refined: 432
Programs: Bruker [1], SHELX [2, 3]
Table 2:

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2).

Atom x y z U iso*/U eq
C1 0.5129 (3) 0.1820 (2) 0.1597 (4) 0.0310 (10)
C2 0.4269 (2) 0.18077 (19) 0.2125 (3) 0.0257 (9)
C3 0.4347 (2) 0.1660 (2) 0.3407 (3) 0.0336 (10)
H3 0.493012 0.156058 0.394213 0.040*
C4 0.3560 (2) 0.1660 (2) 0.3887 (3) 0.0306 (9)
H4 0.361948 0.156183 0.474524 0.037*
C5 0.2683 (2) 0.18036 (18) 0.3106 (3) 0.0227 (9)
C6 0.2611 (2) 0.19732 (19) 0.1834 (3) 0.0279 (10)
H6 0.203052 0.208242 0.130288 0.034*
C7 0.3399 (3) 0.19795 (19) 0.1361 (3) 0.0288 (10)
H7 0.334493 0.210121 0.051411 0.035*
C8 0.1855 (2) 0.17554 (19) 0.3628 (3) 0.0227 (9)
C9 0.0948 (2) 0.16717 (19) 0.4848 (3) 0.0228 (8)
C10 0.0614 (2) 0.1638 (2) 0.6024 (3) 0.0251 (9)
C11 0.1252 (3) 0.1534 (2) 0.7181 (3) 0.0364 (11)
H11 0.188119 0.147297 0.720390 0.044*
C12 0.0966 (3) 0.1520 (2) 0.8300 (3) 0.0369 (11)
H12 0.140149 0.144604 0.907225 0.044*
C13 0.0030 (2) 0.16146 (19) 0.8281 (3) 0.0238 (9)
C14 −0.0608 (2) 0.17096 (19) 0.7125 (3) 0.0273 (9)
H14 −0.123706 0.176930 0.710248 0.033*
C15 −0.0323 (2) 0.1717 (2) 0.5996 (3) 0.0271 (9)
H15 −0.076123 0.177625 0.522106 0.032*
C16 −0.0253 (3) 0.1627 (2) 0.9535 (3) 0.0276 (9)
C17 0.7684 (4) 0.0651 (2) 0.0239 (4) 0.0527 (14)
H17 0.828604 0.082993 0.040842 0.063*
C18 0.6285 (3) 0.0495 (3) 0.0249 (5) 0.0573 (14)
H18 0.570206 0.054084 0.042424 0.069*
C19 0.6497 (4) 0.0028 (3) −0.0561 (5) 0.0667 (15)
H19 0.609773 −0.029986 −0.102362 0.080*
C20 0.7984 (4) −0.0256 (2) −0.1226 (4) 0.0713 (18)
H20A 0.766382 −0.067714 −0.153503 0.086*
H20B 0.856383 −0.037408 −0.061700 0.086*
C21 0.8221 (4) 0.0115 (3) −0.2357 (4) 0.0756 (18)
H21A 0.846710 0.056213 −0.207486 0.091*
H21B 0.871143 −0.013590 −0.261312 0.091*
C22 0.7445 (4) 0.0195 (3) −0.3448 (4) 0.0703 (16)
H22A 0.700299 0.051208 −0.323584 0.084*
H22B 0.713110 −0.024069 −0.364077 0.084*
C23 0.7340 (3) 0.0971 (2) −0.5340 (4) 0.0407 (11)
H23 0.690783 0.126965 −0.514044 0.049*
C24 0.8312 (4) 0.0134 (2) −0.5200 (4) 0.0611 (15)
H24 0.868338 −0.024577 −0.492097 0.073*
C25 0.8253 (4) 0.0493 (2) −0.6280 (4) 0.0573 (14)
H25 0.858564 0.038966 −0.688352 0.069*
C26 0.4676 (4) 0.0434 (3) 0.6484 (6) 0.091 (2)
H26A 0.406804 0.036451 0.592247 0.136*
H26B 0.484162 0.004597 0.703381 0.136*
H26C 0.512848 0.049131 0.598844 0.136*
C27 0.3834 (4) 0.1175 (3) 0.7700 (5) 0.093 (2)
H27A 0.393532 0.157636 0.822223 0.139*
H27B 0.371103 0.079520 0.819444 0.139*
H27C 0.330833 0.124452 0.698446 0.139*
C28 0.5371 (4) 0.1458 (3) 0.7515 (5) 0.0632 (15)
H28 0.531669 0.183433 0.801543 0.076*
N1 0.18690 (19) 0.17251 (16) 0.4864 (3) 0.0263 (7)
N2 0.0978 (2) 0.17132 (16) 0.2922 (3) 0.0296 (8)
H2 0.081690 0.171886 0.210103 0.036*
N3 0.0372 (2) 0.16598 (18) 0.3688 (3) 0.0306 (8)
N4 0.7035 (2) 0.08836 (17) 0.0762 (3) 0.0352 (9)
N5 0.7399 (3) 0.01331 (18) −0.0561 (3) 0.0461 (10)
N6 0.7712 (3) 0.04439 (19) −0.4605 (3) 0.0476 (10)
N7 0.7652 (2) 0.10212 (17) −0.6378 (3) 0.0337 (9)
N8 0.4661 (3) 0.1035 (2) 0.7245 (4) 0.0546 (11)
Ni2 0.72081 (3) 0.16722 (3) 0.20828 (4) 0.02630 (15)
O1 0.58827 (17) 0.16243 (14) 0.2340 (2) 0.0356 (7)
O2 0.50257 (18) 0.20317 (17) 0.0484 (3) 0.0559 (9)
O3 −0.10554 (17) 0.18374 (14) 0.9536 (2) 0.0384 (8)
O4 0.0334 (2) 0.14215 (17) 1.0490 (2) 0.0548 (9)
O5 0.6092 (3) 0.14041 (18) 0.7172 (4) 0.0832 (13)
O1W 0.85681 (17) 0.17914 (16) 0.1935 (3) 0.0356 (7)
O2W 0.67705 (19) 0.23989 (15) 0.0612 (2) 0.0355 (7)
O3W 0.7364 (2) 0.25457 (15) 0.3299 (3) 0.0347 (7)
H1WB 0.9052 (10) 0.177 (2) 0.2554 (15) 0.061 (16)*
H1WA 0.8774 (16) 0.188 (2) 0.1283 (14) 0.11 (2)*
H2WA 0.6960 (13) 0.2360 (18) −0.0066 (12) 0.037 (12)*
H2WB 0.6193 (6) 0.2295 (18) 0.040 (2) 0.046 (14)*
H3WB 0.7023 (16) 0.2863 (11) 0.290 (3) 0.10 (2)*
H3WA 0.7894 (10) 0.2729 (13) 0.361 (4) 0.09 (2)*

Source of material

The mixture of 3,5-bis(4′-carboxy-phenyl)-1,2,4-triazole 30.9 mg (0.1 mmol), nickel nitrate hexahydrate 29.1 mg (0.1 mmol), 1,3-di(1H-imidazol-1-yl)propane 20.1 mg (0.10 mmol), NaOH 6 mg (0.15 mmol) and N,N-dimethylformamide (6 mL) were placed in the autoclave lined with PTFE and heated at 120 °C for 24 h, then cooled to room temperature over 24 h. The green crystals after cooling were collected.

Experimental details

The structure was solved by direct methods and refined with the SHELX crystallographic software package [2]. The hydrogen atoms were placed at calculated positions and refined as riding atoms with isotropic displacement parameters [3].

Comment

The combination of dicarboxylate anions with N-donor auxiliary ligands is a good choice for the construction of novel topologies and networks. Compared to well-known N-donor ligands, the 1,3-di(1H-imidazol-1-yl)propane (diim) ligand [4], [5], [6], bearing alkyl spacers, is a simple bidentate organic building block, which has specific advantages of being flexible and at the same time not being overly lengthy. On the other hand, multicarboxyllic acids like the 3,5-bis(4′-carboxy-phenyl)-1,2,4-triazole have been widely utilized to construct such networks [7], [8], [9], [10]. Meanwhile, many complexes with similar structure had been reported [11, 12].

The title structure is a one-dimensional framework, which via hydrogen bonds forms three-dimensional supramolecules. As shown in Figure 1, the asymmetric unit of the title structure contains one Ni(II) cation, one free N,N-dimethylformamide, one 1,3-di(1H-imidazol-1-yl)propane, one dianionic 4,4′-(1H-1,2,4-triazole-3,5-diyl)dibenzoate (bct) and three coordinated water molecules. Each Ni(II) is six-coordinated by three oxygen atoms from three coordinating water molecules, one oxygen atom from one bct ligand and two nitrogen atoms from two 1,3-di(1H-imidazol-1-yl)propane ligands to generate a distorted octahedral coordination geometry. The Ni–O bond lengths are 2.041(3)–2.137(3) Å and Ni–N bond length are 2.075(4), and 2.081(4) Å, respectively. The bridging diim ligands also link Ni cations to form a 1D chain [13].


Corresponding author: Jiu-Fu Lu, Shaanxi Key Laboratory of Catalysis, College of Chemical & Environment Science, Shaanxi University of Technology, Hanzhong, 723001, P. R. China, E-mail:

Funding source: Undergraduate Innovation and Entrepreneurship Training Program Provincial Project

Award Identifier / Grant number: SLGHX2021001

Funding source: Key R & D Plan of Shaanxi Province

Award Identifier / Grant number: 2020ZDLGY11-02

Funding source: Shaanxi Provincial Science and Technology Department doi.org/10.13039/501100011710

Award Identifier / Grant number: 2021JQ-752

Funding source: Shaanxi University of Technology

Award Identifier / Grant number: SLGRC08

Funding source: Scientific Research Foundation of the Education Department of Shaanxi Province

Award Identifier / Grant number: 20JY008

Funding source: Science and Innovation Capability Support Program of Shaanxi

Award Identifier / Grant number: 2020KJXX-030

Funding source: Start-up Project of Shaanxi University of Technology

Award Identifier / Grant number: SLGRCQD2007

  1. Author contributions: All the authors have accepted responsibility for the entire content of this submitted manuscript and approved submission.

  2. Research funding: This study was financially supported by Undergraduate Innovation and Entrepreneurship Training Program Provincial Project (SLGHX2021001), the Key R & D Plan of Shaanxi Province-Key Industrial Innovation chain (group)-project in industrial field (2020ZDLGY11-02), Shaanxi Provincial Science and Technology Department project (2021JQ-752), the Project funded by Shaanxi University of Technology (SLGRC08), the Scientific Research Foundation of the Education Department of Shaanxi Province (20JY008), the Science and Innovation Capability Support Program of Shaanxi (2020KJXX-030) and the Start-up Project of Shaanxi University of Technology (SLGRCQD2007).

  3. Conflict of interest statement: The authors declare no conflicts of interest regarding this article.

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Received: 2021-06-25
Accepted: 2021-07-20
Published Online: 2021-08-16
Published in Print: 2021-12-20

© 2021 Fei Xi et al., published by De Gruyter, Berlin/Boston

This work is licensed under the Creative Commons Attribution 4.0 International License.

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  43. Crystal structure of (4-methylbenzyl)(triphenyl)phosphonium chloride dihydrate, C26H28ClO2P
  44. The crystal structure of poly[μ2-chlorido-(μ2-1,2-bis(4-pyridyl)ethane-κ2N:N′silver(I)], C12H12AgClN2
  45. Crystal structure of poly[(μ4-benzene-1,2,4,5-tetracarboxylato)-bis(μ2-adipohydrazide)dicadmium], C11H15N4O6Cd
  46. The crystal structure of (E)-N′-(butan-2-ylidene)isonicotinohydrazide 0.5 hydrate C10H13N3O·0.5H2O
  47. The crystal structure of bis(6-phenylpyridine-2-carboxylate-κ2 N,O)-(2,2′-bipyridine-κ2 N,N′)zinc(II) monohydrate, C34H26N4O5Zn
  48. The crystal structure of (1R *,2S *)-1,2-bis(2-fluorophenyl)-3,8-dimethoxyacenaphthene-1,2-diol, C26H20F2O4
  49. Crystal structure of catena-poly[(μ2-1-((2-ethyl-4-methyl-1H-imidazol-1-yl)methyl)-1H-benzotriazole-κ2N:N′)-(nitrato-κ2O,O′)silver (I)], C13H15Ag1N6O3
  50. The crystal structure of [(phenantroline-κ2 N,N′)-bis(6-phenylpyridine-2-carboxylate-κ2 N,O)cobalt(II)]monohydrate, C36H26N4O5Co
  51. Crystal structure of (1E)-N-[(1E)-1-(4-chlorophenyl)ethylidene]-2-[1-(4-chlorophenyl)ethylidene]hydrazine-1-carbohydrazonamide, C 17 H 17 Cl 2 N 5
  52. The crystal structure of (E)-2-((tert-butylimino)methyl)-4-chlorophenol, C11H14ClNO
  53. Crystal structure of all-cis-2,4,6-trihydroxycyclohexane- 1,3,5-triaminium chloride sulfate, C6H18ClN3O7S
  54. Crystal structure of dichlorido-bis(dimethyl sulfoxide-κO)bis(4-methylphenyl-κC 1)tin(IV), C18H26Cl2O2S2Sn
  55. Crystal structure of dichlorido-bis(4-chlorophenyl-κC 1)(2,2′-bipyridyl-κ 2 N,N′)tin(IV), C22H16Cl4N2Sn
  56. Redetermination of the crystal structure of (E)-5-bromo-2-hydroxybenzaldehyde oxime, C 7 H 6 BrNO 2
  57. The crystal structure of (E)-amino(2-(4-methylbenzylidene)hydrazineyl)methaniminium 4-methylbenzoate, C9H13N4 + C8H7O2
  58. Crystal structure of 2-chloro-3-(isopentylamino)naphthalene-1,4-dione, C 15 H 16 ClNO 2
  59. The crystal structure of bis(2-acetyl-5-methoxyphenyl)carbonate 1.5 hydrate, C19H18O7
  60. The crystal structure of poly[(μ 4-4,4′-(azanediylbis(methylene))dibenzoato-κ 4 O:N:O′:Oʺ)zinc(II)], C16H13NO4Zn
  61. The crystal structure of catena-poly[(1,10-phenanthroline-k2N,N′)-(μ3-tetraoxidomoybdato(VI)-k3O:O′:O″)manganese(II)] C12H8N2O4MoMn
  62. Crystal structure of catena-poly[(4-hydroxyl-5-(methoylcarbonyl)thiophene-2-carboxylato-κ1 O)-(μ2-piperazine-1,4-diylbis(pyridin-4-ylmethanone)-κ2 N:N′)silver(I)] monohydrate, C23H23AgN4O8S
  63. Crystal structure of bis(4-bromo-2-(((3-bromopropyl)imino)methyl)phenolato-κ2N,O)-oxido-vanadium(IV), C20H20Br4N2O3V
  64. The crystal structure of (2a′S,2a1′S,3R,5a′S,7′R)-5-(furan-3-yl)-2a′,2a1′-dihydroxy-7′-methyldecahydro-2H-spiro[furan-3,6′-naphtho[1,8-bc]furan]-2,2′(2a′H)-dione, C19H22O7
  65. The crystal structure of 3-bromopicolinic acid, C6H4BrNO2
  66. Crystal structure of 1,1′-(1,4-phenylenebis(methylene))bis(pyridin-1-ium) bis(1,2-dicyanoethene-1,2-dithiolato-κ2 S,S) platinum(II), C26H18N6PtS4
  67. Synthesis and crystal structure of 5-(8-((3-carboxyazetidin-1-ium-1-yl)methyl)-7-hydroxy-4-oxo-4H-chromen-3-yl)-2-hydroxybenzenesulfonate monohydrate, C20H19NO10S
  68. The crystal structure of 3-amino-5-carboxypyridin-1-ium bromide, C6H7BrN2O2
  69. The crystal structure of (2-hydroxy-5-methyl-phenyl)-(1H-pyrazol-4-yl)-methanone hemihydrate, C11H10.5N2O2.5
  70. Crystal structure of tetraaqua-(2-(4-formylphenoxy)acetato-k1O)cadmium(II), C18H22O12Cd
  71. Crystal structure of diethyl 6,12-dimethyl-3,9-di-p-tolyl-3,9-diazapentacyclo[6.4.0.02,7.04,11.05,10]dodecane-1,5-dicarboxylate, C32H38N2O4
  72. Crystal structure of (E)-N′-(1-(3-chloro-4-fluorophenyl)ethylidene)-4-hydroxy – tetrahydrofuran (2/1), C17H16ClFN2O2.5
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