Home The crystal structure of (2-hydroxy-5-methyl-phenyl)-(1H-pyrazol-4-yl)-methanone hemihydrate, C11H10.5N2O2.5
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The crystal structure of (2-hydroxy-5-methyl-phenyl)-(1H-pyrazol-4-yl)-methanone hemihydrate, C11H10.5N2O2.5

  • Li-Hua Wang and Xi-Shi Tai ORCID logo EMAIL logo
Published/Copyright: October 18, 2021

Abstract

C11H10.5N2O2.5, monoclinic, P21/c (no. 14), a = 4.9681(4) Å, b = 32.634(4) Å, c = 6.2373(10) Å, β = 96.244(10)°, V = 1005.3(2) Å3, Z = 4, R gt (F) = 0.0595, wR ref (F 2) = 0.1112, T = 293(2) K.

CCDC no.: 2113911

The molecular structure is shown in the figure. Table 1 contains crystallographic data and Table 2 contains the list of the atoms including atomic coordinates and displacement parameters.

Figure 1: 
The molecular structure of (2-hydroxy-5-methyl-phenyl)-(1H-pyrazol-4-yl)-methanone hemihydrate.
Figure 1:

The molecular structure of (2-hydroxy-5-methyl-phenyl)-(1H-pyrazol-4-yl)-methanone hemihydrate.

Table 1:

Data collection and handling.

Crystal: Colourless prism
Size: 0.14 × 0.11 × 0.09 mm
Wavelength: Mo Kα radiation (0.71073 Å)
μ: 0.10 mm−1
Diffractometer, scan mode: SuperNova, ω
θ max, completeness: 26.5°, 99%
N(hkl)measured, N(hkl)unique, R int: 6368, 2068, 0.057
Criterion for I obs, N(hkl)gt: I obs > 2 σ(I obs), 1262
N(param)refined: 164
Programs: Bruker [1], Olex2 [2], SHELX [3], Diamond [4]
Table 2:

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2).

Atom x y z U iso*/U eq
O1 1.2216 (3) 0.36061 (6) 0.9199 (3) 0.0360 (5)
H1 1.127239 0.379146 0.959739 0.054*
O2 0.8191 (3) 0.41007 (6) 0.8936 (3) 0.0357 (5)
H2 0.580 (5) 0.4209 (8) 0.225 (5) 0.044 (9)*
N1 0.2968 (4) 0.45836 (7) 0.3128 (4) 0.0358 (6)
N2 0.2171 (4) 0.46985 (7) 0.5065 (4) 0.0324 (6)
C1 0.8802 (4) 0.36404 (7) 0.6128 (5) 0.0252 (7)
C2 1.1108 (5) 0.34634 (8) 0.7264 (5) 0.0262 (6)
C3 1.2334 (5) 0.31289 (8) 0.6394 (5) 0.0325 (7)
H3 1.390893 0.301855 0.710989 0.039*
C4 1.1240 (5) 0.29620 (8) 0.4497 (5) 0.0321 (7)
H4 1.209410 0.273843 0.394069 0.038*
C5 0.8882 (5) 0.31146 (8) 0.3361 (5) 0.0285 (7)
H5 0.341 (5) 0.4545 (7) 0.804 (5) 0.026 (8)*
C6 0.7726 (5) 0.34535 (8) 0.4200 (5) 0.0289 (7)
H6 0.616612 0.356315 0.345783 0.035*
C7 0.7620 (6) 0.29137 (9) 0.1324 (5) 0.0415 (8)
H7A 0.590366 0.303959 0.087880 0.062*
H7B 0.735855 0.262724 0.158396 0.062*
H7C 0.879257 0.294605 0.020967 0.062*
H2Na 0.095 (9) 0.4889 (15) 0.518 (9) 0.031 (16)*
C8 0.7530 (5) 0.39999 (8) 0.7025 (5) 0.0268 (7)
C9 0.5496 (5) 0.42466 (8) 0.5741 (5) 0.0263 (7)
C10 0.4969 (5) 0.43106 (8) 0.3529 (6) 0.0328 (7)
C11 0.3684 (5) 0.45067 (8) 0.6621 (6) 0.0308 (7)
O3a −0.0781 (7) 0.49057 (13) 0.0006 (8) 0.0429 (12)
H3A 0.053 (17) 0.480 (3) 0.106 (14) 0.40 (6)*
  1. aOccupancy: 0.5.

Source of material

The title compound was synthesized as following: 0.0941 g 3-formyl-6-methylchromone (0.5 mmol) and 0.0750 g phenylacetic acid hydrazide (0.5 mmol) were dissolved in 15 mL of a ethanol (95%)-water solution (v:v = 2:1) with stirring. Then 0.0549 g zinc acetate dihydrate (0.25 mmol) was added to the above solution. The mixture was stirred and refluxed for 1 h, and continually stirred for 8 h at 80 °C, cooled to room temperature and filtered. The colourless crystals of (2-hydroxy-5-methyl-phenyl)-(1H-pyrazol-4-yl)-methanone hemihydrate were obtained from the filtrate after five weeks.

Experimental details

Most hydrogen atoms were positioned geometrically (C–H = 0.93–0.96 Å, N–H = 0.88 Å; see Table 2). Their U iso values were set to 1.2U eq or 1.5U eq of the parent atoms. The water molecule is disordered over an inversion center.

Comment

Nitrogen heterocyclic compounds show excellent properties in many ways such as antiviral agent [5], exceptional impact and friction sensitivities [6], precursor for the preparation of divalent energetic materials [7]. In this paper, a new nitrogen heterocyclic compound is described. The title compound is made up of the organic target molecule and a disordered lattice water molecule (Figure 1). The bond distances of C8–O2 and C2–O1 are 1.246(3) and 1.353(3) Å, respectively, showing that the C8–O2 bond is double bond. The bond distances of C10–N1 and C11–N2 are 1.338(3) and 1.319(4) Å, respectively. The bond distances of C–O and C–N are consistent with literature [8], [9], [10]. The dihedral angle between the ring 1 (C1–C2–C3–C4–C5–C6) and ring 2 (C9–C10–N1–N2–C11) is 33.25°, indicating that the whole molecule is not coplanar. The title compound forms dimers by bridging hydrogen bonds between water molecule and (2-hydroxy-5-methyl-phenyl)-(1H-pyrazol-4-yl)-methanone. Meanwhile, the title compound form a 3D network by weak π–π interactions, a O–H⃛O hydrogen bond (intramolecular) and O–H⃛N hydrogen bonds (intermolecular).


Corresponding author: Xi-Shi Tai, College of Chemistry and Chemical Engineering, Weifang University, Weifang, Shandong 261061, P. R. China, E-mail:

Funding source: National Natural Science Foundation of China

Award Identifier / Grant number: 21171132

Funding source: Natural Science Foundation of Shandong Province

Award Identifier / Grant number: ZR2014BL003

Funding source: Project of Shandong Province Higher Educational Science and Technology Program

Award Identifier / Grant number: J14LC01

Funding source: Weifang University of Science and Technology

Acknowledgements

We thank Prof. Guido J. Reiss for his help on the refinement of crystal data.

  1. Author contributions: All the authors have accepted responsibility for the entire content of this submitted manuscript and approved submission.

  2. Research funding: This project was supported by the National Natural Science Foundation of China (No. 21171132, https://doi.org/10.13039/501100001809), the Natural Science Foundation of Shandong (ZR2014BL003, https://doi.org/10.13039/501100007129), the Project of Shandong Province Higher Educational Science and Technology Program (J14LC01, https://doi.org/10.13039/501100015642) and Weifang University of Science and Technology (https://doi.org/10.13039/501100010887).

  3. Conflict of interest statement: The authors declare no conflicts of interest regarding this article.

References

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Received: 2021-09-06
Accepted: 2021-10-05
Published Online: 2021-10-18
Published in Print: 2021-12-20

© 2021 Li-Hua Wang and Xi-Shi Tai, published by De Gruyter, Berlin/Boston

This work is licensed under the Creative Commons Attribution 4.0 International License.

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