Home Crystal structure of poly[bis(μ3-3-fluoro-4-(1H-1,2,4-triazol-1-yl)benzoato-κ3 O:O′:N)cadmium(II)] – dimethylformamide (1/1), C21H17CdF2N7O5
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Crystal structure of poly[bis(μ3-3-fluoro-4-(1H-1,2,4-triazol-1-yl)benzoato-κ3 O:O′:N)cadmium(II)] – dimethylformamide (1/1), C21H17CdF2N7O5

  • Yanqing Wang ORCID logo EMAIL logo , Yifan Hao , Zhangjing Wang , Xiaoxu Lv , Fangjing Gu , Jiaxiang Chen and Lintao Dong EMAIL logo
Published/Copyright: August 23, 2024

Abstract

C21H17CdF2N7O5, monoclinic, C2/c (no. 15), a = 15.2452(2) Å, b = 16.1445(2) Å, c = 9.58901(14) Å, β = 101.0960(15)°, V = 2315.99(6) Å3, Z = 4, Rgt (F) = 0.0281, wRref (F 2) = 0.0777, T = 273 K.

CCDC no.: 2347213

The molecular structure is shown in the figure. Table 1 contains crystallographic data and Table 2 contains the list of the atoms including atomic coordinates and displacement parameters.

Table 1:

Data collection and handling.

Crystal: Colourless block
Size: 0.26 × 0.24 × 0.21 mm
Wavelength: Cu Kα radiation (1.54184 Å)
μ: 8.14 mm−1
Diffractometer, scan mode: Bruker SMART CCD 6000, φ and ω
θ max, completeness: 68.2°, >99 %
N(hkl)measured, N(hkl)unique, R int: 6,143, 2,126, 0.017
Criterion for I obs, N(hkl)gt: I obs > 2σ(I obs), 2,030
N(param)refined: 189
Programs: Bruker 1 , Olex2 2 , SHELX 3 , 4
Table 2:

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2).

Atom x y z U iso*/U eq
Cd1 0.500000 0.500000 1.000000 0.02357 (12)
F1 0.81868 (16) 0.79756 (13) 0.8428 (2) 0.0670 (7)
O1 0.59986 (15) 0.49396 (10) 0.7121 (2) 0.0285 (5)
O2 0.61116 (13) 0.56744 (12) 0.9115 (2) 0.0327 (4)
N1 0.89289 (15) 0.75661 (14) 0.6071 (2) 0.0283 (5)
N2 0.94260 (19) 0.72634 (15) 0.5141 (3) 0.0448 (7)
N3 0.96251 (15) 0.86373 (13) 0.5436 (2) 0.0272 (5)
C1 0.63254 (17) 0.55117 (16) 0.7942 (3) 0.0249 (5)
C2 0.70477 (17) 0.60350 (16) 0.7508 (3) 0.0262 (5)
C3 0.74231 (19) 0.58027 (17) 0.6354 (3) 0.0306 (6)
H3 0.725068 0.530704 0.588659 0.037*
C4 0.80508 (19) 0.63008 (17) 0.5892 (3) 0.0311 (6)
H4 0.829619 0.613981 0.511817 0.037*
C5 0.83113 (18) 0.70382 (16) 0.6585 (3) 0.0275 (6)
C6 0.7945 (2) 0.72507 (19) 0.7752 (3) 0.0378 (7)
C7 0.7323 (2) 0.67615 (18) 0.8221 (3) 0.0365 (7)
H7 0.709006 0.691777 0.900978 0.044*
C8 0.90614 (18) 0.83827 (16) 0.6226 (3) 0.0276 (5)
H8 0.879391 0.872158 0.680792 0.033*
C9 0.9826 (2) 0.7928 (2) 0.4800 (3) 0.0382 (7)
H9 1.021921 0.791746 0.416885 0.046*
C10a 0.8939 (7) 0.6021 (5) 0.2209 (9) 0.066 (2)
H10a 0.836784 0.583237 0.225054 0.079*
O3a 0.8994 (5) 0.6638 (4) 0.1502 (8) 0.087 (2)
N4a 0.9633 (5) 0.5590 (5) 0.2934 (9) 0.073 (2)
C11a 0.9494 (9) 0.4881 (7) 0.3808 (14) 0.093 (4)
H11Aa 0.886628 0.481673 0.379664 0.140*
H11Ba 0.980387 0.497005 0.476650 0.140*
H11Ca 0.971907 0.438975 0.343644 0.140*
C12a 1.0554 (7) 0.5900 (8) 0.3066 (18) 0.107 (4)
H12Aa 1.056439 0.634138 0.239961 0.160*
H12Ba 1.093412 0.545802 0.287060 0.160*
H12Ca 1.076256 0.610092 0.401372 0.160*
  1. aOccupancy: 0.5.

1 Source of materials

The 3-fluoro-4-(1H-1,2,4-triazol-1-yl)benzoic acid (TBA–F) was purchased from Shanghai Titan Scientific Co., Ltd. Other reagents were purchased from Anhui Zesheng Technology Co., Ltd. 5 mL N,N-dimethylformamide (DMF) was added to a 10 mL vial with cadmium(II) nitrate tetrahydrate (Cd(NO3)2·4H2O, 0.0463 g, 0.15 mmol) and TBA-F (0.0311 g, 0.15 mmol). The clarified solution was obtained after the ultrasonic treatment. The vial was then transferred to a oven, heated to 92 °C for 48 h and cooled to room temperature at a rate of 15 °C/h. Clear light colourless needle-like crystals of the title complex were obtained, yielding 29 % (based on ligand TBA-F).

2 Experimental details

The initial structure of the title complex was determined using the SHELXT program. The refinement process was carried out using the SHELXL program. The anisotropic refinement was applied to the Cd, C, N, and O atoms, whereas the H atoms were positioned ideally with isotropic thermal parameters. As the solvent DMF molecule is disordered, command ‘DFIX’, ‘DANG’, ‘SADI’, ‘FLAT’, and ‘SIMU’ were performed.

3 Comment

The 4-(1H-1,2,4-triazol-1-yl)benzoic acid (TBA), as an organic ligand with potential coordination sites of oxygen and nitrogen atoms, has been widely used in the construction of metal complexes. 5 , 6 , 7 , 8 However, there are few reports on the crystal structures formed by TBA derivatives with functional groups modification. Since the modification of functional groups may have important effects on the structure and properties of crystals, therefore, to enrich the family of TBA-based ligands, the −F functional group modified TBA ligand (TBA-F) was prepared and the title 3D Cd(II)-complex based on TBA-F ligand was synthesized under hydrothermal condition.

The asymmetric unit contains half a cadmium(II) ion, one deprotonated TBA-F ligand, half a free DMF molecule (disordered). The cadmium(II) ion is hexa-coordinated, bonded with four O-atoms (O11−x,y,3/2−z , O2, O1 x,1−y,1/2+z , O21−x,1−y,2−z ) and two N-atoms (N3−1/2+x,3/2−y,2+z , N33/2−x,−1/2+y,3/2−z ). The Cd–O and Cd–N distances are of 2.296(2) – 2.3089(18) Å and 2.331(2) Å, respectively. These bond lengths, as well as the C–C, C–N, C–O and N–N are analogous to the reported azole-based crystal structures. 9 , 10 , 11 , 12 , 13 The angle formed between the triazole heterocyclic ring and the central benzene ring measures 22.89°. Each TBA-F ligand is coordinated with three cadmium(II) ions. Four TBA-F ligands and four cadmium(II) ions formed a Cd4(TBA-F)4 square. Two adjoining squares were then bridged by carboxyl O-atoms to form a double-walled Cd8(TBA-F)8 unit. In the end, these units were further connected with each other and finally resulted in the 3D framework of the title Cd(II)-complex. It should be emphasized that there are no classical hydrogen bonds present in the structure but the π stacking interactions (between the triazole and benzene rings, centroid-centroid distance: 3.6983(1) Å) play a positive role in the formation of crystals.


Corresponding authors: Yanqing Wang and Lintao Dong, College of Chemistry and Chemical Engineering, Weifang University, Weifang, Shandong 261061, P.R. China, E-mail: (Y. Wang), (L. Dong)

  1. Author contribution: All the authors have accepted responsibility for the entire content of this submitted manuscript and approved submission.

  2. Conflict of interest statement: The authors declare no conflicts of interest regarding this article.

  3. Research funding: Shandong Province Natural Science Foundation (No. ZR2021QB053), and research startup funds of Weifang University (No. 196100040020).

References

1. Bruker. SAINT and SADABS; Bruker AXS Inc.: Madison, Wisconsin, USA, 2000.Search in Google Scholar

2. Dolomanov, O. V.; Bourhis, L. J.; Gildea, R. J.; Howard, J. A. K.; Puschmann, H. OLEX2: A Complete Structure Solution, Refinement and Analysis Program. J. Appl. Crystallogr. 2009, 42, 339–341. https://doi.org/10.1107/s0021889808042726.Search in Google Scholar

3. Sheldrick, G. M. Crystal Structure Refinement with SHELXL. Acta Crystallogr. 2015, C71, 3–8. https://doi.org/10.1107/s2053229614024218.Search in Google Scholar

4. Sheldrick, G. M. SHELXT – Integrated Space-Group and Crystal-Structure Determination. Acta Crystallogr. 2015, A71, 3–8. https://doi.org/10.1107/s2053273314026370.Search in Google Scholar PubMed PubMed Central

5. Singh, M.; Senthilkumar, S.; Rajput, S.; Neogi, S. Pore-Functionalized and Hydrolytically Robust Cd(II)-Metal-Organic Framework for Highly Selective, Multicyclic CO2 Adsorption and Fast-Responsive Luminescent Monitoring of Fe(III) and Cr(VI) Ions with Notable Sensitivity and Reusability. Inorg. Chem. 2020, 59, 3012–3025. https://doi.org/10.1021/acs.inorgchem.9b03368.Search in Google Scholar PubMed

6. Fang, X.-D.; Yao, J.; Fan, R.; Bai, X.-F.; Liu, Y.-E.; Hou, C.-F.; Xu, Q.-Q.; Zhu, A.-X.; Huang, B. A Luminescent Zinc-Organic Framework as Bifunctional Chemosensors for Detection of Nitrobenzene and Fe3+. J. Solid State Chem. 2021, 294, 121854. https://doi.org/10.1016/j.jssc.2020.121854.Search in Google Scholar

7. Nandi, S.; Haldar, S.; Chakraborty, D.; Vaidhyanathan, R. Strategically Designed Azolyl-Carboxylate MOFs for Potential Humid CO2 Capture. J. Mater. Chem. A 2017, 5, 535–543. https://doi.org/10.1039/c6ta07145g.Search in Google Scholar

8. Feng, Y.-M.; Xia, Y.-P. Crystal Structure of Tetraaqua-Bis[4-(1h- 1,2,4-Triazol-1-Yl)Benzoato-Κ1n] Cadmium(II), C18H20CdN6O8. Z. Kristallogr. N. Cryst. Struct. 2022, 237, 865–866. https://doi.org/10.1515/ncrs-2022-0205.Search in Google Scholar

9. Xia, Y.-P.; Huang, Y.-X. Crystal Structure of Bis(Dimethylammonium) poly[{μ4-1,1′-(1,4-Phenylenebis(Methylene))bis(1H-Pyrazole-3,5-Dicarboxylato)-κ6N4O2}Zinc(II)], C22H26N6O8Zn. Z. Kristallogr. N. Cryst. Struct. 2023, 238, 359–360. https://doi.org/10.1515/ncrs-2023-0028.Search in Google Scholar

10. Li, T.; Liu, X.; Huang, Z.-P.; Lin, Q.; Lin, C.-L.; Zhan, Q.-G.; Xu, X.-D.; Cai, Y.-P. Metal Cation-Dependent Construction of Two 3-D Interpenetrating Networks Based on the Ligand 1-(4-Carboxyphenyl)-1,2,4-Triazole. Inorg. Chem. Commun. 2014, 39, 70–74. https://doi.org/10.1016/j.inoche.2013.10.036.Search in Google Scholar

11. Zhu, A.-X.; Qiu, Z.-Z.; Yang, L.-B.; Fang, X.-D.; Chen, S.-J.; Xu, Q.-Q.; Li, Q.-X. A Luminescent Cadmium(II) Metal-Organic Framework Based on a Triazolate-Carboxylate Ligand Exhibiting Selective Gas Adsorption and Guest-dependent Photoluminescence Properties. CrystEngComm 2015, 17, 4787–4792. https://doi.org/10.1039/c5ce00405e.Search in Google Scholar

12. Xia, Y.-P.; Han, L.-L. Crystal Structure of Dimethylammonium Poly [μ4-1,1′-(1,4-Phenylenebis(Methylene))bis(1H-Pyrazole-3,5-Dicarboxylato-κ6N,O:O′:N′,O″:O‴) Manganese(II)], C22H26MnN6O8. Z. Kristallogr. N. Cryst. Struct. 2022, 237, 975–976. https://doi.org/10.1515/ncrs-2022-0340.Search in Google Scholar

13. Singh, M.; Palakkal, A. S.; Pillai, R. S.; Neogi, S. N-Functionality Actuated Improved CO2 Adsorption and Turn-On Detection of Organo-Toxins with Guest-Induced Fluorescence Modulation in Isostructural Diamondoid MOFs. J. Mater. Chem. C 2021, 9, 7142–7153. https://doi.org/10.1039/d1tc01123e.Search in Google Scholar

Received: 2024-04-13
Accepted: 2024-07-30
Published Online: 2024-08-23
Published in Print: 2024-12-17

© 2024 the author(s), published by De Gruyter, Berlin/Boston

This work is licensed under the Creative Commons Attribution 4.0 International License.

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