Home Crystal structure of (2,2′-bipyridyl)bis(4-bromobenzyl)dibromidotin(IV), C24H20Br4N2Sn
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Crystal structure of (2,2′-bipyridyl)bis(4-bromobenzyl)dibromidotin(IV), C24H20Br4N2Sn

  • See Mun Lee , Kong Mun Lo and Edward R.T. Tiekink ORCID logo EMAIL logo
Published/Copyright: September 9, 2019

Abstract

C24H20Br4N2Sn, monoclinic, P21/n (no. 14), a = 9.3186(1) Å, b = 16.2615(1) Å, c = 16.8482(1) Å, β = 100.748(1)°, V = 2508.29(4) Å3, Z = 4, Rgt(F) = 0.0254, wRref(F2) = 0.0688, T = 100(2) K.

CCDC no.: 1948395

The molecular structure is shown in the figure. Table 1 contains crystallographic data and Table 2 contains the list of the atoms including atomic coordinates and displacement parameters.

Table 1:

Data collection and handling.

Crystal:Colourless prism
Size:0.22 × 0.12 × 0.07 mm
Wavelength:Cu Kα radiation (1.54178 Å)
μ:15.7 mm−1
Diffractometer, scan mode:XtaLAB Synergy, ω
θmax, completeness:67.1°, >99%
N(hkl)measured, N(hkl)unique, Rint:30929, 4485, 0.044
Criterion for Iobs, N(hkl)gt:Iobs > 2 σ(Iobs), 4381
N(param)refined:280
Programs:CrysAlisPRO [1], SHELX [2], [3], WinGX/ORTEP [4]
Table 2:

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2).

AtomxyzUiso*/Ueq
Sn0.90693(2)0.80694(2)0.46094(2)0.01015(8)
Br10.80742(3)0.85195(2)0.59351(2)0.02153(10)
Br21.18629(3)0.86061(2)0.49199(2)0.01685(9)
Br30.61849(3)0.38481(2)0.40064(2)0.02523(10)
Br40.19446(3)0.94430(2)0.24467(2)0.02203(10)
N10.9227(3)0.74801(15)0.33496(13)0.0146(5)
N20.6826(2)0.74562(16)0.40155(14)0.0140(5)
C10.9890(3)0.69134(17)0.51694(17)0.0149(6)
H1A1.08810.68210.50540.018*
H1B0.99880.69730.57620.018*
C20.8997(3)0.61702(18)0.49149(17)0.0150(6)
C30.9281(3)0.56959(19)0.42624(17)0.0159(6)
H31.00610.58460.40010.019*
C40.8437(3)0.50124(19)0.39961(17)0.0180(6)
H40.86280.46980.35520.022*
C50.7319(3)0.47960(19)0.43854(17)0.0168(6)
C60.7023(3)0.5238(2)0.50419(18)0.0183(6)
H60.62660.50700.53140.022*
C70.7855(3)0.59280(19)0.52899(17)0.0165(6)
H70.76410.62450.57270.020*
C80.8480(3)0.92369(18)0.40082(17)0.0150(6)
H8A0.87280.96870.44060.018*
H8B0.90720.93150.35840.018*
C90.6906(3)0.93006(18)0.36335(16)0.0145(6)
C100.6383(3)0.8981(2)0.28615(16)0.0184(6)
H100.70530.87410.25680.022*
C110.4920(3)0.9006(2)0.25182(17)0.0189(6)
H110.45800.87740.20000.023*
C120.3950(3)0.93752(18)0.29436(17)0.0157(6)
C130.4414(3)0.96956(19)0.37062(17)0.0154(6)
H130.37380.99400.39930.019*
C140.5893(3)0.96530(18)0.40475(16)0.0157(6)
H140.62210.98690.45740.019*
C151.0446(3)0.7537(2)0.30375(17)0.0176(6)
H151.12520.78360.33280.021*
C161.0580(4)0.7177(2)0.23069(18)0.0218(7)
H161.14530.72310.20970.026*
C170.9406(4)0.6738(2)0.18967(18)0.0256(7)
H170.94680.64790.13990.031*
C180.8142(4)0.6674(2)0.22070(18)0.0221(7)
H180.73240.63810.19220.026*
C190.8080(3)0.70469(19)0.29462(17)0.0165(6)
C200.6776(3)0.70164(18)0.33275(17)0.0156(6)
C210.5517(3)0.6578(2)0.2992(2)0.0237(7)
H210.54940.62590.25180.028*
C220.4306(4)0.6614(2)0.3357(2)0.0282(8)
H220.34470.63160.31380.034*
C230.4354(3)0.7086(2)0.4040(2)0.0251(7)
H230.35230.71300.42890.030*
C240.5634(3)0.74942(19)0.43552(17)0.0174(6)
H240.56720.78140.48310.021*

Source of material

The melting point of the compound was measured on a Melt-Temp II digital melting point apparatus and was uncorrected. The IR spectrum was measured on a Bruker Vertex 70v FTIR spectrophotometer from 4000 to 400 cm−1. The 1H and 13C{1H} NMR spectra were recorded in CDCl3 solution on a Bruker Ascend 400 MHz NMR spectrometer with chemical shifts relative to tetramethylsilane.

Di(4-bromobenzyl)tin dibromide was synthesized by the direct reaction of 4-bromobenzyl bromide (Merck) and metallic tin powder (Merck) in toluene according to a literature procedure [5]. Di(4-bromobenzyl)tin dibromide (0.62 g, 1.0 mmol) and 2,2′-bipyridine (Aldrich, 0.16 g, 1.0 mmol) were heated in 95% ethanol (30 mL) and stirred for 2 h. After filtration, the filtrate was evaporated slowly until colourless crystals were formed. Yield: 0.42 g (54.2%). M.pt: 465–467 K. IR (cm−1) 1586 (m) ν(CN), 1482, 1097 (s) ν(CN), 467 (m) ν(SnN). 1H NMR (DMSO-d6, ppm): δ 3.10 (s, 2H, Ph—CH2), 7.18–7.32 (m, 2H, Ph—H), 7.49–7.60 (m, 2H, Ph—H), 7.77–7.87 (m, 1H, bipy-H), 8.09–8.13 (m, 1H, bipy-H), 8.45–8.48 (d, 1H, bipy-H), 8.76–8.80 (m, 1H, bipy-H). 13C{1H} NMR (DMSO-d6, ppm): δ 71.1 (CH2), 118.1, 125.5, 130.8, 132.1 (Ph—C), 121.8, 126.0. 139.3, 149.0, 153.7 (bipy-C).

Experimental details

The C-bound H atoms were geometrically placed (C—H = 0.95–0.99 Å) and refined as riding with Uiso(H) = 1.2Ueq(C). The maximum and minimum residual electron density peaks of 0.90 and 1.11 eÅ−3, respectively, were located 1.07 and 0.98 Å from the Sn atom, respectively.

Comment

Very recently, the crystal and molecular structures of the organotin precursor, (4-BrC6H4CH2)2SnBr2, featured in the title compound, (4-BrC6H4)2SnBr2(2,2′-bipyridyl), was described [6]. By contrast to the approximately 50 analogous structures of bipyridyl-type (NN) ligands with R2SnCl2, there are only three species of the general formula R2SnBr2(NN) reported, namely R = Me, NN = 4,4′-bis(but-3-en-1-yl)-2,2′-bipyridine [7], R = CF2CF3, NN = 1,10-phenanthroline [8] and R = 3-BrC6H4CH2, NN = 4,7-diphenyl-1,10-phenanthroline [9]. Given this paucity of data for R2SnBr2(NN), the title compound was synthesised and characterised crystallographically.

The molecule is illustrated in the figure (70% displacement ellipsoids) and features a distorted octahedral geometry for the tin atom based on two carbon atoms of the substituted benzyl groups, two bromide atoms and two nitrogen atoms of the 2,2′-bipyridyl molecule. In the Br2C2N2 donor set, the benzyl-carbon atoms are mutually trans, and each of the bromide atoms is trans to a pyridyl-nitrogen atom. While there is a definite disparity in the Sn—Br bond lengths [Sn—Br1 = 2.6752(3) Å and Sn—Br2 = 2.7027(3) Å], the Sn—N bond lengths [Sn—N1 = 2.358(2) Å and Sn—N2 = 2.363(2) Å] are equal within experimental error. Non-systematic variations in geometric parameters in related organotin compounds of bipyridyl-type ligands were shown by DFT calculations to be the result of molecular packing considerations rather than having any chemical significance [10], [11]. The major distortions from the ideal octahedral geometry in the cis angles is seen in the N1—Sn—N2 chelate angle of 69.27(8)°, and in terms of trans angles, in the N1—Sn—Br1 angle of 162.19(6)°. Globally, the phenyl rings of the benzyl substituents are folded over the molecule to be orientated towards the 2,2′-bipyridyl molecule. This is reflected in close inter-centroid ring separations of 3.5663(17) Å between the chelate and C2-phenyl rings, and 3.6720(17) Å between the N2-pyridyl and C9-phenyl rings. The importance of stabilising interactions between chelate and organic rings is now well documented [12], [13], at least in the context of intermolecular interactions.

As mentioned above, the strucure of (4-BrC6H4CH2)2SnBr2 became available recently [6]. The molecule has crystallographic two-fold symmetry with the tetrahedrally coordinated tin atom lying on the axis. The Sn—Br bond distances are each 2.5143(2) Å, that is, considerably shorter than those in the title compound, reflecting the influence of the increased coordination number at the tin atom in the title structure. Such a trend was not as pronounced in the recently described structure of the sulphoxide adduct, (4-BrC6H4CH2)2SnBr2(O=S(CH2Ph)2 [14], where only one of the Sn—Br bond lengths elongated significantly, i.e. the axially-bound bromide atom in a trigonal-bipyramidal geometry.

The three-dimensional molecular packing is sustained by weak non-covalent interactions. Thus, supramolecular layers parallel to (1 0 −1) are constructed by π⋯π interactions between centrosymmetrically-related C2-phenyl rings [Cg(C2—C7)⋯Cg(C2—C7)i = 3.7569(17)° for symmetry operation (i) 2 − x, 1 − y, 1 − z] and end-on C—Br⋯π(N2-pyridyl) interactions [C5—Br3⋯Cg(N2,C20—C24)ii: Br3⋯Cg(N2,C20—C24)ii = 3.9096(13) Å, C5⋯Cg(N2,C20—C24)ii = 5.563(3) Å with angle at Br3 = 143.56(9)° for (ii) 3/2 − x, −1/2 + y, 1/2 − z]. The connections between layers are of the type C—H⋯Br [C16—H16⋯Br1iii: = H16⋯Br1iii = 2.95 Å, C16⋯Br1iii = 3.746(4) Å with angle at H16 = 142° for (iii) 1/2 + x, 3/2 − y, −1/2 + z] and phenyl-Br⋯Br(phenyl) [Br3⋯Br4iv = 3.5737(4) Å for (iv) 1/2 − x, −1/2 + y, 1/2 − z]. The importance of halogen bonding in crystals has been reviewed recently [15].

To evaluate the molecular packing further and to compare this to the structure of the all-chloro analogue (4-ClC6H4)2SnCl2(2,2′-bipyridyl) [16], Crystal Explorer 17 [17] was employed following established protocols [18] to calculate the Hirshfeld surfaces as well as the two-dimensional fingerprint plots (full and delineated into individual contacts). Nearly equal contributions to the calculated Hirshfeld surface are provided by H⋯H [40.2%] and H⋯Br/Br⋯H [40.8%] contacts. The next most significant contributions are due to H⋯C/C⋯H [11.1%] and then fall away to Br⋯C/C⋯Br [3.1%], Br⋯Br [2.3%] and C⋯C [1.9%]. When compared to the all-chloro derivative [16], the H⋯H [42.3%] and H⋯Cl/Cl⋯H [38.7%] contacts, respectively, increase and decrease by approximately the same extent. The contribution of contacts between halogen(Cl) and C atoms is reduced [2.0%], but the percentage contribution of the other identified contacts remain about the same.

Funding source: Sunway University Sdn Bhd

Award Identifier / Grant number: STR-RCTR-RCCM-001-2019

Funding statement: Sunway University Sdn Bhd is thanked for financial support of this work through Grant no. STR-RCTR-RCCM-001-2019.

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Received: 2019-07-18
Accepted: 2019-08-21
Published Online: 2019-09-09
Published in Print: 2019-11-26

©2019 See Mun Lee et al., published by De Gruyter, Berlin/Boston

This work is licensed under the Creative Commons Attribution 4.0 Public License.

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  43. The crystal structure of 1,12-diazaperylene, C18H10N2
  44. Crystal structure of 1-(5-(4-chlorophenyl)-3-(2-fluorophenyl)-4,5-dihydro-1H-pyrazol-1-yl)ethan-1-one, C17H14N2OFCl
  45. Crystal structure of (4aR,6aR,6bR,10S,12aR)-10-acetoxy-1,2,3,4, 4a,5,6,6a,6b,7,8,8a,9,10,11,12,12a, 12b,13,14b-icosahydro-2,2,4a,6b,9,9,12a-heptamethylpicene-6a-carboxylic acid, C32H50O4
  46. The crystal structure of tetrachlorido-bis{1,3-bis(2,6-diisopropylphenyl)-1H-3λ4-imidazol-2-yl}-(μ2-pyrimidine-κ2N:N′)dipalladium(IV) — dichloromethane (1/2), C60H80Cl8N6Pd2
  47. The crystal structure of (E)-4-(7-methoxy-2-oxo-2H-chromen-8-yl)-2-methylbut-2-en-1-yl 4-nitrobenzoate, C22H19NO7
  48. Crystal structure of 3-methyl-N-(pyrimidin-5-ylmethyl)pyridin-2-amine, C11H12N4
  49. The crystal structure of 2,5-dichloroterephthalic acid dihydrate, C8H8Cl2O6
  50. The crystal structure of 2,4,6-tris[4-(1H-imidazol-1-yl)phenyl]-1,3,5-triazine — dimethylformamide (1/1), C33H28N10O
  51. Crystal structure of N-(adamantan-1-yl)-5-(dimethylamino)naphthalene-1-sulfonamide, C22H28N2O2S
  52. Crystal structure of poly[diaqua-(μ4-4-(3,5-dicarboxy-κ1O-phenoxy)phthalato-κ3O:O′:O′)cadmium(II)], C16H12CdO11
  53. Crystal structure of poly[diaqua-bis(μ2-3-((1H-imidazol-1-yl)methyl)benzoato-κ2N:O)manganese(II)], C22H22MnN4O6
  54. Crystal structure of 9-(3-phenoxyphenyl)-3,4,6,7,9,10-hexahydroacridine-1,8(2H,5H)-dione, C25H23NO3
  55. The crystal structure of poly[(μ3-2,4,6-tris[4-(1H-imidazol-1-yl)phenyl]-1,3,5-triazine-k3N:N′:N′′)-(nitrato-k2O,O)-(nitrato-k1O)zinc(II)] - N,N-dimethylacetamide (1/2), C38H39N13O8Zn
  56. Crystal structure of poly[(μ7-4-(3,5-dicarboxylatophenoxy)phthalato)-(1,10-phenanthroline-κ2N,N′)dizinc(II)], C28H14N2O9Zn2
  57. The crystal structure of methyl 2-(benzylamino)-5-(benzyloxy)benzoate, C22H21NO3
  58. Crystal structure of (1,4,8,11-tetraazacyclotetradecane)palladium(II) tetracyanoplatinate(II), C14H24N8PdPt
  59. Crystal structure of (pyridine-2-carboxylato-κ2N,O)-[2-(2-pyridyl)phenyl-κ2N,C1]palladium(II), C17H12N2O2Pd
  60. Crystal structure of (cyclohexane-1,4-diammonium) 4-[(4-carboxylatophenyl)disulfanyl]benzoate dimethylsulphoxide hydrate (1/1/1/1), [C6H16N2]2+[C14H8O4S2]2−⋅C2H6OS⋅H2O
  61. Crystal structure of the 2:1 co-crystal 2-[(2-carboxyphenyl)disulfanyl]benzoic acid – 3-bromobenzoic acid, 2(C14H10O4S2)⋅C7H5BrO2
  62. Crystal structure of chlorido-dimethyl-(phenylpiperazine-1-carbodithioato-κ2S,S′)tin(IV), C13H19ClN2S2Sn
  63. Crystal structure of (N-n-butyl, N-methyl-dithiocarbamato-κ2 S,S′)-chlorido-dimethyl-tin(IV), C8H18ClNS2Sn
  64. Crystal structure of (2,2′-bipyridyl)bis(4-bromobenzyl)dibromidotin(IV), C24H20Br4N2Sn
  65. Crystal structure of (2,2′-bipyridyl)bis(4-chlorobenzyl)dichloridotin(IV), C24H20Cl4N2Sn
  66. Crystal structure of N-methyl-N-phenyl(methylsulfanyl)carbothioamide, C9H11NS2
  67. Crystal structure of 4-phenylpiperazin-1-ium (4-phenylpiperazin-1-yl)carbothioylsulfanide, [C10H15N2][C11H13N2S2]
  68. Crystal structure of catena-{di-aqua-sodium [n-butyl(methyl)carbamothioyl]sulfanide}n, [C6H16NNaO2S2]n
  69. Crystal structure of (2-([1,1-bis(hydroxymethyl)-2-oxyethyl]iminomethyl)-5-(n-decyl)phenolato)-dimethyl-tin(IV), C23H39NO5Sn
  70. Crystal structure of 4-chloro-N′-[(1E)-(3-ethoxy-2-hydroxyphenyl)methylidene]benzohydrazide – a Z′ = 3 structure, C16H15ClN2O3
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