Home Crystal structure of 1-(adamantan-1-yl)-3-phenylthiourea, C17H22N2S
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Crystal structure of 1-(adamantan-1-yl)-3-phenylthiourea, C17H22N2S

  • Lamya H. Al-Wahaibi , Hazem A. Ghabbour , Gamal A. E. Mostafa , Maha S. Almutairi and Ali A. El-Emam EMAIL logo
Published/Copyright: February 26, 2016

Abstract

C17H22N2S, orthorhombic, Pbca (no. 61), a = 12.0579(7) Å, b = 11.12133(5) Å, c = 21.9741(13) Å, V = 2946.7(3) Å3, Z = 8, Rgt(F) = 0.0470, wRref(F2) = 0.1125, T = 100 K.

CCDC no.:: 1422362

The crystal structure is shown in the figure. Tables 13 contain details of the measurement method and a list of the atoms including atomic coordinates and displacement parameters.

Table 1

Data collection and handling.

Crystal:colourless, block, size 0.256×0.263×0.398 mm
Wavelength:Mo Kα radiation (0.71073 Å)
μ:2.12 cm−1
Diffractometer, scan mode:Bruker APEX-II D8 venture, φ and ω scans
2θmax:66.44°
N(hkl)measured, N(hkl)unique:75607, 5647
N(param)refined:189
Programs:Bruker programs [21], SHELX [22]
Table 2

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2).

AtomSitexyzUiso
H(1A)8c0.17611.00920.30190.015
H(1B)8c0.22750.87730.29320.015
H(2A)8c0.26620.99740.20530.016
H(3A)8c0.40240.84910.23100.017
H(3B)8c0.46200.96330.20070.017
H(4A)8c0.56030.90460.29070.015
H(5A)8c0.46940.91820.38700.017
H(5B)8c0.40680.82190.34500.017
H(7A)8c0.39001.12400.40170.015
H(7B)8c0.27621.16140.36900.015
H(8A)8c0.42861.24490.31410.016
H(9A)8c0.56491.09710.33890.018
H(9B)8c0.56031.11480.26640.018
H(10A)8c0.27091.18870.25450.018
H(10B)8c0.38171.17070.21520.018
H(13A)8c0.36060.89370.51610.020
H(14A)8c0.45620.74130.56730.023
H(15A)8c0.36050.57790.60810.024
H(16A)8c0.16740.56790.59870.024
H(17)8c0.07200.71400.54340.021
H(1N2)8c0.078(1)0.921(2)0.5072(8)0.023(4)
H(1N1)8c0.291(1)0.868(2)0.4235(7)0.023(4)
Table 3

Fractional atomic coordinate and displacement parameters (Å2).

AtomSitexyzU11U22U33U12U13U23
S(1)8c0.08030(2)1.07375(3)0.41559(2)0.0116(1)0.0181(2)0.0144(1)0.0040(1)0.0035(1)0.0036(1)
N(1)8c0.26034(8)0.9295(1)0.41040(5)0.0125(4)0.0155(5)0.0141(4)0.0037(4)0.0042(4)0.0052(4)
N(2)8c0.14348(8)0.9049(1)0.49190(5)0.0110(4)0.0201(5)0.0144(5)0.0034(4)0.0048(4)0.0052(4)
C(1)8c0.24619(9)0.9634(1)0.29833(5)0.0099(4)0.0130(5)0.0134(5)−0.0011(4)0.0006(4)−0.0021(4)
C(2)8c0.31196(9)1.0079(1)0.24289(5)0.0123(5)0.0163(5)0.0109(5)0.0007(4)−0.0005(4)−0.0012(4)
C(3)8c0.4199(1)0.9353(1)0.23670(5)0.0154(5)0.0146(5)0.0135(5)0.0010(4)0.0038(4)−0.0028(4)
C(4)8c0.49018(9)0.9521(1)0.29439(5)0.0102(5)0.0141(5)0.0142(5)0.0022(4)0.0037(4)0.0005(4)
C(5)8c0.42416(9)0.9084(1)0.34975(5)0.0112(5)0.0159(6)0.0148(5)0.0033(4)0.0030(4)0.0036(4)
C(6)8c0.31567(9)0.9803(1)0.35617(5)0.0095(5)0.0133(5)0.0095(5)0.0001(4)0.0027(4)0.0009(4)
C(7)8c0.34492(9)1.1135(1)0.36445(5)0.0111(5)0.0141(5)0.0123(5)−0.0012(4)0.0019(4)−0.0034(4)
C(8)8c0.41048(9)1.1578(1)0.30882(5)0.0120(5)0.0109(5)0.0171(5)−0.0014(4)0.0034(4)−0.0011(4)
C(9)8c0.51822(9)1.0858(1)0.30224(6)0.0099(5)0.0170(6)0.0168(5)−0.0015(4)0.0027(4)−0.0006(4)
C(10)8c0.3401(1)1.1413(1)0.25103(6)0.0147(5)0.0142(5)0.0148(5)0.0026(4)0.0024(4)0.0032(4)
C(11)8c0.16826(9)0.9648(1)0.43974(5)0.0109(5)0.0142(5)0.0124(5)−0.0005(4)0.0014(4)0.0004(4)
C(12)8c0.20689(9)0.8168(1)0.52299(5)0.0127(5)0.0164(6)0.0109(5)0.0019(4)0.0021(4)0.0011(4)
C(13)8c0.3215(1)0.8261(1)0.53153(5)0.0142(5)0.0211(6)0.0136(5)−0.0016(4)0.0004(4)0.0007(4)
C(14)8c0.3780(1)0.7362(1)0.56271(6)0.0143(5)0.0280(7)0.0141(5)0.0026(5)−0.0015(4)−0.0022(5)
C(15)8c0.3214(1)0.6394(1)0.58715(6)0.0215(6)0.0247(7)0.0130(5)0.0074(5)−0.0003(4)0.0026(5)
C(16)8c0.2069(1)0.6327(1)0.58079(6)0.0212(6)0.0204(6)0.0194(6)0.0002(5)0.0024(5)0.0064(5)
C(17)8c0.1500(1)0.7201(1)0.54835(6)0.0129(5)0.0215(6)0.0173(6)−0.0002(4)0.0019(4)0.0043(5)

Discussion

The adamantane nucleus represent an important structural motif in several biologically and pharmaceutically active drugs [1, 2]. Several adamantane-based drugs are currently used as efficient medications against influenza viral infections [35], malaria infections [6], central nervous disorders [7, 8], hyperglycaemia [9] and drug-resistant TB strain infections [10]. In addition, thiourea derivatives are recognized as potent anti-Malaria [11], anti-HIV [12], anticancer [13] and antimicrobial [14] agents. As a part of an ongoing research interest in the chemotherapeutic [1517] and structure [1820] of adamantane derivatives, we report herein, the crystal structural of the title compound. In the title structure the asymmetric unit of the crystal structure contains one molecule. The title molecule is a functionalized thiourea with an adamantyl and phenyl substituents attached to the two nitrogen atoms, N1 and N2. The molecules packing in the crystal structure is stabilized via one intermolecular hydrogen bond, of which S1 acts as the hydrogen bond acceptor and the NH group of N2 acts as hydrogen bond donor. The distance of the interactions between N2—H1N2⋯S1i is 2.554 (17) Å and the angle is 158.6(15) Symmetry code: (i) -x, -y+2, -z+1.

Experimental details

Cell refinement and data reduction were carried out by Bruker SAINT [21]. All hydrogen atoms were idealized and refined usind a riding model (AFIX 13, 23 or 43 option of the SHELX program [22]).

Source of material

A mixture of phenyl isothiocyanate (1.35 g, 0.01 mol) and 1-adamantylamine (1.51 mg, 0.01 mol), in ethanol (10 mL), was heated under reflux for 4 h. After cooling, the precipitated crude product was filtered, dried and crystallized from ethanol to yield 2.18 mg (76%) of the title compound (C17H22N2S) as transparent block crystals. M.P.: 444–446 K. Single crystals suitable for X-ray diffraction were obtained by slow evaporation of a solution in EtOH/CHCl3 (1:1) at room temperature. 1H NMR (DMSO-d6, 500.13 MHz): δ 1.66–1.69 (m, 6H, Adamantane-H), 2.02 (s, 3H, Adamantane-H), 2.14–2.18 (m, 6H, Adamantane-H), 6.95 (d, 2H, Ar—H, J = 7.0 Hz), 7.25–7.27 (m, 1H, Ar—H), 7.41 (s, 1H, NH), 9.34 (s, 1H, NH). 13C NMR (DMSO-d6, 125.76 MHz): δ 28.50, 34.96, 41.82, 51.22 (Adamantane-C), 123.22, 126.84, 130.32, 138.74 (Ar—C), 180.26 (C = S). ESI-MS, m/z: 285.3 (M—H).


Corresponding author: Ali A. El-Emam, Department of Pharmaceutical Chemistry, College of Pharmacy, King Saud University, P.O. Box 2457, Riaydh 11451, Saudi Arabia, e-mail:

Acknowledgements:

The authors would like to extend their appreciation to the Deanship of Scientific Research at King Saud University for funding the work through the research group project no. RG-1436–024.

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Received: 2015-12-19
Accepted: 2016-2-8
Published Online: 2016-2-26
Published in Print: 2016-6-1

©2016 Lamya H. Al-Wahaibi et al., published by De Gruyter.

This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 3.0 License.

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  39. Crystal structure of 2-amino-4-(4-fluorophenyl)-5-oxo-5,6,7,8-tetrahydro-4H-chromene-3-carbonitrile, C16H13FN2O2
  40. The crystal structure of hexaqua(μ2-3-(3-(pyridin-4-yl)-1,2,4-oxadiazol-5-yl)propanoato-1κ2O,O′;2κO′)(3-(3-(pyridin-4-yl)-1,2,4-oxadiazol-5-yl)propanoato-κO)(3-(3-(pyridin-4-yl)-1,2,4-oxadiazol-5-yl)propanoato-κ2O,O′)digadolinium(III) octahydrate, C60H76Gd2N18O32
  41. Crystal structure of hexacarbonyl bis(μ2-2-methoxybenzenethiolato-κ2S)pyridine(triphenylphosphane)dirhenium(I), C43H34NO8PS2Re2
  42. Crystal structure of 14-((1-(benzyloxycarbonyl-amino)-2-methylpropan-2-yl)sulfanyl)acetate Mutilin, C34H49NO6S
  43. Crystal structure of 2-methoxy-6-(((2-(1-methyl-1H-benzo[d] imidazol-2-yl)phenyl)imino)methyl)phenol — ethanol (1/1), C24H25N3O3
  44. Crystal structure of 2-(bis(methylthio)methylene)-1-phenylbutane-1,3-dione, C13H14O2S2
  45. Crystal structure of (E)-2-(bis(methylthio)methylene)-1-phenyl-3-(2-phenylhydrazono)butan-1-one, C19H20N2OS2
  46. Crystal structure of dichlorido(2-(1-methyl-1H-benzo[d]imidazol-2-yl)aniline-κ2N,N′)zinc(II)
  47. Crystal structure of bis(1-methyl-1H-tetrazole-5-thiolato)mercury(II)
  48. Crystal structure of (E)-2-styryl-1-ferrocenylsulfonyl-1H-imidazo[4,5-b]pyridine, C24H19FeN3O2S
  49. Crystal structure of aquabis(1-cyclopropyl-6-fluoro-4-oxo-7-(piperazin-4-ium-1-yl)-1,4-dihydroquinoline-3-carboxylato-κ2O,O′)copper(II) thiophene-2,5-dicarboxylate trihydrate, [Cu(C17H18N3FO3)2(H2O)](C6H2SO4)·3(H2O)
  50. Crystal structure of 2-amino-4-(2,6-dichlorophenyl)-7,7-dimethyl-5-oxo-5,6,7,8-tetrahydro-4H-chromene-3-carbonitrile, C18H16Cl2N2O2
  51. Crystal structure of 2,4,6,8,10,12-hexanitro-2,4,6,8,10,12-hexaazatetracyclo[5·5·0·05·9·03·11]dodecane 1/3 hydrate, C6H8N12O13
  52. Crystal structure of monocarbonyl(N-nitroso-N-oxido-phenylamine-κ2O,O′)(triphenylarsine-κAs)rhodium(I), C25H20AsN2O3Rh
  53. The crystal structure of 1-(4-(4-chlorophenoxy)-2-chlorophenyl)ethanone, C14H10Cl2O2
  54. Crystal structure of N,N-diethyl-2-(2-(6-(4-methoxybenzyl)-7-oxo-7H-thiazolo[3,3-b][1,2,4]triazin-3-yl)phenoxy)acetamide, C25H26N4O4S
  55. Crystal structure of tetraqua((E)-4,4′-(diazene-1,2-diyl)bis(5-oxo-4,5-dihydro-1,2,4-triazol-1-ide)-κ2N:O)barium(II), C4H10N8O6Ba
  56. Crystal structure of 2-amino-4-(3-phenoxyphenyl)-5-oxo-5,6,7,8-tetrahydro-4H-chromene-3-carbonitrile, C22H18N2O3
  57. Crystal structure of diethylammonium 5-((4-fluorophenyl)(6-hydroxy-1,3-dimethyl-2,4-dioxo-1,2,3,4-tetrahydropyrimidin-5-yl)methyl)-1,3-dimethyl-2,6-dioxo-1,2,3,6-tetrahydropyrimidin-4-olate, C23H30FN5O6
  58. Crystal structure of 2-amino-4-(3,5-difluoro-phenyl)-5-oxo-5,6,7,8-tetrahydro-4H-chromene-3-carbonitrile, C16H12F2N2O2
  59. Crystal structure of tris(N-nitroso-N-oxyanilino-κ2O, O′) oxidoniobium(V), C18H15N6O7Nb
  60. Crystal structure of 1-(5-benzoyl-4-methyl-2-(phenylamino)thiophen-3-yl)ethan-1-one, a structure with Z′ = 6, C20H17NO2S
  61. Crystal structure of diethyl-3-methyl-4-phenylthieno[2,3-b]thiophene-2,5-dicarboxylate, C19H18O4S2
  62. Crystal structure of 3,5-dicarboxybenzoate — benzene-1,3,5-tricarboxylic acid (1/1), C24H22N2O12
  63. The crystal structure of 2-chloro-1,3-bis(2,4,6-trimethylphenyl)-4,4-dimethyl-1,3,2λ3,4-diazaphosphasiletidine
  64. Crystal structure of hexaquamanganese(II) bis(hexaborato-κ3O,O′,O′′)manganese(II) dihydrate, B12H28Mn2O34
  65. Crystal structure of 1-propyl-3-methylimidazolium pentaborate, [C7H13N2][B5O6(OH)4]
  66. Crystal structure of 13-(4-fluorophenyl)-11,13-dihydro-1H-benzo[h]indazolo[6,7-b] [1, 6]naphthyridin-12(6H)-one — dimethylformamide — water (1/2/1), C29H31FN6O4
  67. Crystal structure of 1-(2-chlorophenyl)-2-(2-nitrophenyl)ethan-1-ol, C14H12ClNO3
  68. Crystal structure of (Z)-2-((2-bromo-1-phenylvinyl)oxy)benzonitrile, C15H10BrNO
  69. Crystal structure of tetrachlorido(1E,1′E)-N,N′-((1,4-phenylenebis(propane-2,2-diyl))bis(4,1-phenylene))bis(1-(pyridin-2-yl-κN)methanimine-κN)dizinc(II), C36H34N4Zn2Cl4
  70. Crystal structure of 2,6-bis(3-methylpyridinyl)hexahydro-4,8-ethenopyrrolo-[3,4-f]isoindole-1,3,5,7(2H,6H)-tetrone, C24H20N4O4
  71. Crystal structure of trans-bis(2-methylmaleato-κ2O,O′) bis(piperazinium-κN) cobalt(II) trihydrate, C18H36CoN4O11
  72. Crystal structure of (E)-4-chloro-N′-(4-(diethylamino)benzylidene)benzohydrazide, C18H20ClN3O
  73. Crystal structure of 3,6-di(1H-imidazol-1-yl)-9H-carbazole, C18H13N5
  74. Crystal structure of 4-(4-pyridinyl)-1-naphthoic acid, C16H11NO2
  75. Crystal structure of 1,1′-diformyl-4,4′-(6H,12H-5,11-methano-dibenzo[b,f][11,5]diazocine-2,8-diyl)dibenzene, C29H22N2O2
  76. Crystal structure of N′-(adamantan-2-ylidene)pyridine-3-carbohydrazide, C16H19N3O
  77. Crystal structure of 1,1′-(butane-1,4-diyl)bis(5-methyl-1H-pyrazole-3-carbaldehyde), C14H18N4O2
  78. Crystal structure of methyl 8-hydroxy-3-isopropyl-5a,8-dimethyl-2,3,4,5,5a,6,7,8,10a,10b-decahydrocyclohepta[e]indene-3a(1H)-carboxylate, C21H34O3
  79. Crystal structure of 6-oxo-4-propyl-2-(propylthio)-1,6-dihydropyrimidine-5-carbonitrile, C11H15N3OS
  80. Crystal structure of poly[diacetato(μ2-1,4-bis(1H-imidazol-1-yl)benzene-κ2N:N′)nickel(II)], C26H22N8NiO4
  81. Crystal structure of bis(2,4-dibromo-6-{(E)[(4-fluorobenzyl)imino]methyl}phenolato-κ2N,O) copper(II), C28H18Br4F2N2O2Cu
  82. Crystal structure of 1-(adamantan-1-yl)-3-phenylthiourea, C17H22N2S
  83. Crystal structure of 3-(6-(5-amino-1-phenyl-1H-pyrazol-3-yl)pyridin-2-yl)-1-phenyl-1H-pyrazol-5-amine – dioxan (2/1), C25H23N7O
  84. Crystal structure of 5-ethyl-6-[(3-methylphenyl)sulfanyl]pyrimidine-2,4(1H,3H)-dione, C13H14N2O2S
  85. Crystal structure of (((1E,1′E)-(cyclohexane-1,2-diylbis(azanylylidene-κ2N,N′))bis(methanylylidene))bis(2,1-phenylene))bis((2,6-diisopropylphenyl)amide-κ2N′′,N′′′)manganese(II), C44H54N4Mn
  86. Crystal structure of prop-2-en-1-yl 2-oxo-2H-1-benzopyran-3-carboxylate, C13H10O4
  87. Crystal structure of bis(μ2-2-((3-methylphenyl)imino)methylphenolato-κ2N,O:O)hexacarbonyldimanganese(I), C34H24Mn2N2O8
  88. Crystal structure of (Z)-1-(1,5-dimethyl-1H-pyrazol-3-yl)-3-hydroxybut-2-en-1-one C9H12N2O2
  89. Crystal structure of 2,2′-[pentane-1,5-diylbis(oxy)]dibenzaldehyde, C19H20O4
  90. Crystal structure of 2-phenyl-5,6,7,8-tetrahydro-4H-benzo[4,5]thieno[2,3-d][1,3]oxazin-4-one, C16H13NO2S
  91. Crystal structure of (E)-1-(2-chlorophenyl)-N-(4-chlorophenyl)methanimine, C13H9Cl2N
  92. Crystal structure of ethyl 2-amino-5-bromothiazole-4-carboxylate, C6H7BrN2O2S
  93. Crystal structure of 2-benzylisothiouronium tetraphenylborate, C32H31BN2S
  94. Crystal structure of poly[(μ2-biphenyl-2,2′-dicarboxylato-κ4O,O′:O′′,O′′′)(μ2-4,4′-bipyridine-κ2N:N′)copper(II)], C24H16CuN2O4
  95. Crystal structure of (η5-pentamethylcyclopentadienyl)titanium(III)dichloride (THF), C14H23Cl2OTi
  96. Crystal structure of 3-ferrocenylsulfonyl-2-(4-methoxyphenyl)-3H-imidazo[4,5-b]pyridine, C23H19FeN3O3S
  97. Crystal structure of 2-benzoyl-3-(4-fluorophenyl)cyclopropane-1,1-dicarbonitrile, C18H11FN2O
  98. Crystal structure of 1,6-ditosyl-1,6-diazecane, C22H30N2O4S2
  99. Crystal structure of N-phenyl-2-(pyridin-4-ylcarbonyl)hydrazinecarboxamide with Z′ = 4, C13H12N4O2
  100. Crystal structure of N,N-bis(diphenylphosphanyl)cyclohexylamine, C30H31NP2
  101. Crystal structure of 3-(4-hydroxy-3-methoxyphenyl)-N-phenylpropanamide, C16H17NO3
  102. Crystal structure of 6-(2-fluorophenyl)-3-phenyl-[1,2,4]-triazolo[3,4-b][1,3,4]thiadiazole, C15H9FN4S
  103. Crystal structure of catena-poly[aqua(dicyanoazanido-2κN-μ2-dicyanoazanido-1κN:2κN′)(μ2-2-methoxy-6-(((2-((3-methoxy-2-oxidobenzylidene)amino)ethyl)imino)methyl)phenolato-1κ2N,N′,2κ2O,O′,1κ2O′′,O′′′:2κ2O′′,O′′′)cadmium(II)copper(II)], C22H20CdCuN8O5
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