Home Crystal structure of 4-(4-pyridinyl)-1-naphthoic acid, C16H11NO2
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Crystal structure of 4-(4-pyridinyl)-1-naphthoic acid, C16H11NO2

  • Da-Bin Shi EMAIL logo , Chao Meng and Yong-Zheng Chen
Published/Copyright: February 16, 2016

Abstract

C16H11NO2, triclinic, P1̅, a = 7.3496(15) Å, b = 9.3709(17) Å, c = 9.4112(16) Å, α = 104.712(6)°, β = 96.261(7)°, γ = 103.400(7)°, V = 600.1(2) Å3, Z = 2, Rgt(F) = 0.0466, wRref(F2) = 0.1203, T = 299 K.

CCDC no.:: 1419423

The crystal structure is shown in the figure. Tables 13 contain details of the measurement method and a list of the atoms including atomic coordinates and displacement parameters.

Table 1

Data collection and handling.

Crystal:Yellow, block, size 0.22×0.26×0.30 mm
Wavelength:Mo Kα radiation (0.71073 Å)
μ:0.92 cm−1
Diffractometer, scan mode:PHOTON100 CMOS detector, ω scan
2θmax:50.72°
N(hkl)measured, N(hkl)unique:4751, 2147
Criterion for Iobs, N(hkl)gt:Iobs > 2 σ(Iobs), 1381
N(param)refined:173
Programs:SHELX [8, 9]
Table 2

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2).

AtomSitexyzUiso
H(1)2i1.51181.30130.68610.080
H(3)2i1.35500.99040.43600.053
H(8)2i1.00141.34810.46490.056
H(16)2i0.84520.57440.19400.048
H(4)2i1.17100.77750.25090.056
H(14)2i0.67670.6038−0.27590.059
H(15)2i0.69220.36160.00120.053
H(11)2i0.63520.91570.09940.055
H(13)2i0.82850.8249−0.09150.056
H(9)2i0.70981.34340.35260.068
H(10)2i0.52361.12570.17000.068
Table 3

Atomic displacement parameters (Å2).

AtomSitexyzU11U22U33U12U13U23
O(1)2i1.4421(2)1.2237(2)0.6250(2)0.053(1)0.0359(8)0.051(1)0.0036(8)−0.0205(8)−0.0047(7)
C(2)2i1.1853(3)1.1265(2)0.4248(2)0.037(1)0.030(1)0.029(1)0.0028(9)0.0005(9)0.0012(9)
C(6)2i0.8922(3)0.9993(2)0.2384(2)0.035(1)0.032(1)0.031(1)0.0056(9)0.0021(9)0.0078(9)
N(1)2i0.6675(3)0.4614(2)−0.1559(2)0.042(1)0.037(1)0.037(1)0.0024(8)−0.0024(8)−0.0028(8)
O(2)2i1.3156(3)1.3925(2)0.5555(2)0.075(1)0.0307(9)0.059(1)0.0052(8)−0.0185(9)0.0008(7)
C(7)2i1.0060(3)1.1321(2)0.3521(2)0.039(1)0.029(1)0.030(1)0.0043(9)0.0045(9)0.0070(8)
C(5)2i0.9608(3)0.8662(2)0.1979(2)0.035(1)0.034(1)0.029(1)0.005(1)−0.0010(9)0.0009(9)
C(3)2i1.2407(3)0.9946(2)0.3864(2)0.036(1)0.039(1)0.043(1)0.010(1)−0.009(1)−0.006(1)
C(12)2i0.8545(3)0.7264(2)0.0754(2)0.031(1)0.031(1)0.032(1)0.0040(9)0.0013(9)0.0006(9)
C(1)2i1.3175(3)1.2616(2)0.5402(2)0.042(1)0.032(1)0.030(1)0.004(1)−0.000(1)0.0019(9)
C(8)2i0.9297(3)1.2601(2)0.3914(2)0.051(2)0.035(1)0.049(1)0.011(1)0.001(1)0.004(1)
C(16)2i0.8118(3)0.5841(2)0.0994(2)0.045(1)0.037(1)0.030(1)0.008(1)−0.001(1)0.0016(9)
C(4)2i1.1293(3)0.8657(2)0.2742(2)0.046(2)0.036(1)0.045(1)0.015(1)−0.005(1)−0.009(1)
C(14)2i0.7104(3)0.5981(3)−0.1797(2)0.054(2)0.048(1)0.031(1)0.001(1)−0.004(1)0.003(1)
C(15)2i0.7196(3)0.4565(2)−0.0175(2)0.046(2)0.033(1)0.043(1)0.005(1)0.002(1)0.003(1)
C(11)2i0.7107(3)1.0019(3)0.1730(2)0.041(1)0.043(1)0.046(1)0.006(1)−0.006(1)0.009(1)
C(13)2i0.8019(3)0.7318(2)−0.0695(2)0.054(2)0.037(1)0.036(1)−0.001(1)0.000(1)0.005(1)
C(9)2i0.7553(4)1.2575(3)0.3248(3)0.058(2)0.042(1)0.067(2)0.023(1)0.002(1)0.009(1)
C(10)2i0.6435(4)1.1271(3)0.2147(3)0.046(2)0.053(2)0.068(2)0.019(1)−0.005(1)0.015(1)

Source of material

A mixture of methyl-4-bromo-1-naphthoate (2.65 g, 10.0mmol), 4-pyridineboronic acid (1.47 g, 12 mmol), K2CO3 (6.9 g, 50.0 mmol) and palladium tetrakis(triphenylphosphine) (0.23 g, 0.2 mmol, 2 mol %), in 120 mL of dioxane /H2O (5/1) was stirred under nitrogen for 12 h at 95 °C. After the mixture was cooled to room temperature, it was extracted with CH2Cl2 and washed with H2O several times. The organic layer was dried with MgSO4, and the solvent was removed with a rotary evaporator. The resulting crude product was purified by column chromatography using silica gel and methylene chloride as the eluent. Methyl-4-(4-pyridinyl)-1-naphthoate was obtained after removal of the solvents (2.47 g, 94% yield). 4-(4-pyridinyl)-1-naphthoic acid was synthesized by a base-catalyzed hydrolysis reaction. The yield is 98% [7]. The 4-(4-pyridinyl)-1-naphthoic acid (25 mg, 0.1 mmol) and H2O (10.0 mL) were dissolved in a 25 mL Teflon-lined autoclave and heated at 180 °C for one day, and then cooled to room temperature. Yellow crystals of a single phase were obtained. Yield: 24.55 mg (98.2 %).

Experimental details

All hydrogen atoms were identified in difference Fourier syntheses. The structure was solved by direct methods [8] and refined on F2 by full-matrix least-squares technique using the SHELX-97 program package [9].

Discussion

Nowadays, there has been increasing research on the crystal engineering of coordination polymer (CPs), also known as metal-organic frameworks (MOFs), for their unusual topology frameworks as well as their potential applications, such as: catalysis [13], sensing [4], gas storage [5], and magnetic applications [6]. The rigid ligands with multicoordination sites have been used to build these stable frameworks. At present, pyridine carboxylic acid (Hpydc) seems to be a potential rigid ligand in some complexes reported. O- and N-donors of Hpydc allow different kinds of interesting 3D structures of transition metal and lanthanide complexes. However, the ligand, 4-(4-pyridinyl)-1-naphthoic acid, has been not used to construct MOFs so far.

The title compound consists of one pyridyl moiety ring and one substituted naphthyl moiety, which generates a conjugated system. The dihedral angle between the planes of two aromatic rings is 56.56(6)°. Bond lengths and bond angles within the molecule are in the expected ranges. The bond lengths of C1–O1 and C1–O2 are 1.318(2) Å and 1.201(2) Å, respectively. As a result of the conjugation of these aromatic rings, the bond length of C5–C12 is 1.489(3) Å, which is shorter than that of typical C–C (1.53 Å). The bond angle (C1–O1–H1) and (O1–C1–O2) are 109.5° and 122.2°, respectively. There is an intermolecular hydrogen bond (O1⋯N1 = 2.677(2) Å symmetry code: x+1, y+1, z+1), which produce one-dimensional chain to stabilize the crystal structure.


Corresponding author: Da-Bin Shi, School of Pharmaceutical Sciences, Zunyi Medical College, Zunyi 563000, People's Republic of China, e-mail:

Acknowledgements:

We are grateful for financial support from National Natural Science Foundation of China (grant no. 21362047) and Science and Technology Foundation of Guizhou Province (grant no. QKHSYZ-2013–3061, QKHJZ-2014–2175 and QKHRCTD-2014–4002).

References

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Received: 2015-8-21
Accepted: 2016-1-20
Published Online: 2016-2-16
Published in Print: 2016-6-1

©2016 Da-Bin Shi et al., published by De Gruyter.

This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 3.0 License.

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  77. Crystal structure of 1,1′-(butane-1,4-diyl)bis(5-methyl-1H-pyrazole-3-carbaldehyde), C14H18N4O2
  78. Crystal structure of methyl 8-hydroxy-3-isopropyl-5a,8-dimethyl-2,3,4,5,5a,6,7,8,10a,10b-decahydrocyclohepta[e]indene-3a(1H)-carboxylate, C21H34O3
  79. Crystal structure of 6-oxo-4-propyl-2-(propylthio)-1,6-dihydropyrimidine-5-carbonitrile, C11H15N3OS
  80. Crystal structure of poly[diacetato(μ2-1,4-bis(1H-imidazol-1-yl)benzene-κ2N:N′)nickel(II)], C26H22N8NiO4
  81. Crystal structure of bis(2,4-dibromo-6-{(E)[(4-fluorobenzyl)imino]methyl}phenolato-κ2N,O) copper(II), C28H18Br4F2N2O2Cu
  82. Crystal structure of 1-(adamantan-1-yl)-3-phenylthiourea, C17H22N2S
  83. Crystal structure of 3-(6-(5-amino-1-phenyl-1H-pyrazol-3-yl)pyridin-2-yl)-1-phenyl-1H-pyrazol-5-amine – dioxan (2/1), C25H23N7O
  84. Crystal structure of 5-ethyl-6-[(3-methylphenyl)sulfanyl]pyrimidine-2,4(1H,3H)-dione, C13H14N2O2S
  85. Crystal structure of (((1E,1′E)-(cyclohexane-1,2-diylbis(azanylylidene-κ2N,N′))bis(methanylylidene))bis(2,1-phenylene))bis((2,6-diisopropylphenyl)amide-κ2N′′,N′′′)manganese(II), C44H54N4Mn
  86. Crystal structure of prop-2-en-1-yl 2-oxo-2H-1-benzopyran-3-carboxylate, C13H10O4
  87. Crystal structure of bis(μ2-2-((3-methylphenyl)imino)methylphenolato-κ2N,O:O)hexacarbonyldimanganese(I), C34H24Mn2N2O8
  88. Crystal structure of (Z)-1-(1,5-dimethyl-1H-pyrazol-3-yl)-3-hydroxybut-2-en-1-one C9H12N2O2
  89. Crystal structure of 2,2′-[pentane-1,5-diylbis(oxy)]dibenzaldehyde, C19H20O4
  90. Crystal structure of 2-phenyl-5,6,7,8-tetrahydro-4H-benzo[4,5]thieno[2,3-d][1,3]oxazin-4-one, C16H13NO2S
  91. Crystal structure of (E)-1-(2-chlorophenyl)-N-(4-chlorophenyl)methanimine, C13H9Cl2N
  92. Crystal structure of ethyl 2-amino-5-bromothiazole-4-carboxylate, C6H7BrN2O2S
  93. Crystal structure of 2-benzylisothiouronium tetraphenylborate, C32H31BN2S
  94. Crystal structure of poly[(μ2-biphenyl-2,2′-dicarboxylato-κ4O,O′:O′′,O′′′)(μ2-4,4′-bipyridine-κ2N:N′)copper(II)], C24H16CuN2O4
  95. Crystal structure of (η5-pentamethylcyclopentadienyl)titanium(III)dichloride (THF), C14H23Cl2OTi
  96. Crystal structure of 3-ferrocenylsulfonyl-2-(4-methoxyphenyl)-3H-imidazo[4,5-b]pyridine, C23H19FeN3O3S
  97. Crystal structure of 2-benzoyl-3-(4-fluorophenyl)cyclopropane-1,1-dicarbonitrile, C18H11FN2O
  98. Crystal structure of 1,6-ditosyl-1,6-diazecane, C22H30N2O4S2
  99. Crystal structure of N-phenyl-2-(pyridin-4-ylcarbonyl)hydrazinecarboxamide with Z′ = 4, C13H12N4O2
  100. Crystal structure of N,N-bis(diphenylphosphanyl)cyclohexylamine, C30H31NP2
  101. Crystal structure of 3-(4-hydroxy-3-methoxyphenyl)-N-phenylpropanamide, C16H17NO3
  102. Crystal structure of 6-(2-fluorophenyl)-3-phenyl-[1,2,4]-triazolo[3,4-b][1,3,4]thiadiazole, C15H9FN4S
  103. Crystal structure of catena-poly[aqua(dicyanoazanido-2κN-μ2-dicyanoazanido-1κN:2κN′)(μ2-2-methoxy-6-(((2-((3-methoxy-2-oxidobenzylidene)amino)ethyl)imino)methyl)phenolato-1κ2N,N′,2κ2O,O′,1κ2O′′,O′′′:2κ2O′′,O′′′)cadmium(II)copper(II)], C22H20CdCuN8O5
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