Home The crystal structure of 2,2-difluoro-4-(trifluoromethyl)-2,5-dihydro-[1,3,2]dioxaborinino[5,4-c]chromen-3-ium-2-uide, C11H6BF5O3
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The crystal structure of 2,2-difluoro-4-(trifluoromethyl)-2,5-dihydro-[1,3,2]dioxaborinino[5,4-c]chromen-3-ium-2-uide, C11H6BF5O3

  • Guang Yu , JinYuan bai and YanJun Hou EMAIL logo
Published/Copyright: May 18, 2017

Abstract

C11H6BF5O3, orthorhombic, P21212 (no. 18), a = 13.236(4) Å, b = 18.566(5) Å, c = 4.7869(13) Å, V = 1176.3(6) Å3, Z = 4, Rgt(F) = 0.0442, wRref(F2) = 0.1307, T = 296 K.

CCDC no.:: 1443760

The asymmetric unit of the title crystal structure is shown in the figure. Tables 1 and 2 contain details of the measurement method and a list of the atoms including atomic coordinates and displacement parameters.

Table 1

Data collection and handling.

Crystal:Colourless block
Size:0.32 × 0.28 × 0.26 mm
Wavelength:Mo Kα radiation (0.71073 Å)
μ:1.7 cm−1
Diffractometer, scan mode:Bruker APEX-II, φ and ω
2θmax, completeness:55°, >99%
N(hkl)measured, N(hkl)unique, Rint:9043, 2695, 0.047
Criterion for Iobs, N(hkl)gt:Iobs > 2 σ(Iobs), 2354
N(param)refined:191
Programs:SHELX [1], Bruker programs [2]
Table 2

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2).

AtomxyzUiso*/Ueq
B10.25429(19)0.20745(13)0.9912(6)0.0412(5)
C10.2285(2)0.43401(14)0.8213(7)0.0633(7)
H10.18510.41440.95380.076*
C20.2154(3)0.50363(15)0.7309(8)0.0768(9)
H20.16370.53170.80550.092*
C30.2781(3)0.53197(15)0.5308(8)0.0757(9)
H30.26790.57910.47090.091*
C40.3555(3)0.49259(16)0.4168(7)0.0697(8)
H40.39630.51250.27870.084*
C50.37250(19)0.42252(14)0.5100(6)0.0526(6)
C60.30814(17)0.39286(12)0.7115(5)0.0463(5)
C70.32102(15)0.31769(11)0.7822(5)0.0396(4)
C80.41015(15)0.28217(12)0.6940(5)0.0417(5)
C90.49084(19)0.32933(16)0.5702(8)0.0643(8)
H9A0.52880.35210.71940.077*
H9B0.53720.29990.46250.077*
C100.41183(15)0.20923(12)0.7270(5)0.0408(5)
C110.4967(2)0.16256(15)0.6128(7)0.0562(6)
F10.26734(13)0.20434(8)1.2711(3)0.0630(4)
F20.16811(11)0.17459(8)0.9081(4)0.0592(4)
F3a0.58543(12)0.18456(13)0.6933(6)0.0859(8)
F4a0.4973(2)0.1624(2)0.3406(5)0.1241(14)
F5a0.4891(2)0.09550(11)0.6998(10)0.1192(13)
F3Ab0.551(3)0.136(2)0.788(8)0.100*
F4Ab0.465(3)0.113(2)0.492(10)0.100*
F5Ab0.555(3)0.191(2)0.423(9)0.100*
O10.44828(15)0.38382(11)0.3931(5)0.0680(6)
O20.24879(12)0.28501(8)0.9056(4)0.0509(4)
O30.34155(12)0.17239(8)0.8487(4)0.0469(4)
  1. aOccupancy: 0.929(4); bOccupancy: 0.071(4).

Source of materials

2,2-difluoro-4-(trifluoromethyl)-2,5-dihydro-[1,3,2]dioxaborinino[5,4-c]chromen-3-ium-2-uide is easily synthesized by means of the literature known synthetic protocol [2]. Boron trifluoride diethyl etherate (9.1 mL, 45 mmol) was added to the solution of 3-(2,2,2-trifluoroacetyl)chroman-4-one (7.3 g, 30 mmol) in 80 mL CH2Cl2 under N2. After 12 hours of stirring at room temperature, the mixture was refluxed for 12 h and then the solvent was removed. The crude product was recrystallized from CH2Cl2 to give the title compound in a yield of 52.8%. Crystals suitable for single-crystal X-ray diffraction were obtained by evaporation from CH2Cl2 at room temperature.

Experimental details

All H atoms were placed in idealized positions [C—H = 0.96 (methyl), 0.97 (methylene) and 0.93 Å (aromatic)] and included in the refinement in the riding-model approximation, with Uiso(H) = 1.5Ueq(methyl C) and 1.2Ueq(methylene and aromatic C). The title structure was solved by direct methods and refined using the SHELXTL program package [1]. The atoms are disorder over two split positions (Table 2) and have occupancies of 0.929 and 0.071.

Comment

Difluoroboron compounds have wide range applications in sensors, optoelectronic devices, probes, and catalysis in the past few years [3], [4], [5], [6]. Herein, we report the crystal structure of difluoroboron 3-(2,2,2-trifluoroacetyl)chroman-4-one.

In the title crystal structure, the six-membered ring containing the boron atom is close to planarity. Furthermore, the F—B—F plane is almost perpendicular to the 2H-1λ3,3,2-dioxaborininyl moiety. The bond distances and bond angles are all in normal ranges. There are no classic hydrogen bonds found in the structure, but there are weak C—H⋅⋅⋅F hydrogen bonds.

Acknowledgement

We are grateful for financial support by the Education Department of Hei Longjiang Province of China (No. 12521413).

References

1 Sheldrick, G. M.: A short history of SHELX. Acta Crystallogr. A64 (2008) 112–122.10.1107/S0108767307043930Search in Google Scholar PubMed

2 Bruker. APEX2 and SAINT. Bruker AXS Inc., Madison, WI, USA (2012).Search in Google Scholar

3 Bai, G. F.; Yu, C. J.; Cheng, C.; Hao, E. H.; Wei, Y.; Mu, X. L.; Jiao, L. J.: Syntheses and photophysical properties of BF2 complexes of curcumin analogues. Org. Biomol. Chem. 12 (2014) 1618–1626.10.1039/C3OB42201ASearch in Google Scholar PubMed

4 Nagata, Y.; Chujo, Y.: Synthesis of methyl-substituted main-chain-type organoboron quinolate polymers and their emission color tuning. Macromolecules 8 (2008) 2809–2813.10.1021/ma7025918Search in Google Scholar

5 Jakle, F.: Advances in the synthesis of organoborane polymers for optical, electronic, and sensory applications. Chem. Rev. 7 (2010) 3985–4022.10.1021/cr100026fSearch in Google Scholar PubMed

6 Padilha, L. A.; Webster, S.; Przhonska, O. V.; Hu, H. H.; Peceli, D.; Ensley, T. R.; Bondar, M. V.; Gerasov, A. O.; Kovtun, Y. P.; Shandura, M. P.; Kachkovski, A. D.; Hagan, D. J.; Stryland, E. W. V.: Efficient two-photon absorbing acceptor-π-acceptor polymethine dyes. J. Phys. Chem. A23 (2010) 6493–6501.10.1021/jp100963eSearch in Google Scholar PubMed

Received: 2017-1-4
Accepted: 2017-5-5
Published Online: 2017-5-18
Published in Print: 2017-7-26

©2017 Guang Yu et al., published by De Gruyter.

This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 3.0 License.

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