Startseite Crystal structure of (3,6-dioxocyclohexa-1,4-diene-1,4-bis(olato)-κ4O,O′:O′′,O′′′)-bis(tris(2-pyridylmethyl)amine-κ4N,N′,N′′,N′′′))-dizinc(II) bis(hexafluorophosphate(V)), C42H38F12N8O4P2Zn2
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Crystal structure of (3,6-dioxocyclohexa-1,4-diene-1,4-bis(olato)-κ4O,O′:O′′,O′′′)-bis(tris(2-pyridylmethyl)amine-κ4N,N′,N′′,N′′′))-dizinc(II) bis(hexafluorophosphate(V)), C42H38F12N8O4P2Zn2

  • Li Nan , Zhang Li-Fang und Zhao Yun EMAIL logo
Veröffentlicht/Copyright: 26. Mai 2017

Abstract

C42H38F12N8O4P2Zn2, monoclinic, P21/c (no. 14), a = 11.470(2) Å, b = 16.221(3) Å, c = 11.548(2) Å, β = 91.03(3)°, V = 2148.3(7) Å3, Z = 2, Rgt(F) = 0.0365, wRref(F2) = 0.0905, T = 123(2) K.

CCDC no.:: 1546444

The cationic title complex together with the counter anion is shown in the figure (symmetry code: A = 2−x, −y, 2−z). Tables 1 and 2 contain details of the measurement method and a list of the atoms including atomic coordinates and displacement parameters.

Table 1

Data collection and handling.

Crystal:Brown block
Size:0.10 × 0.08 × 0.06 mm
Wavelength:Mo Kα radiation (0.71073 Å)
μ:13.0 cm−1
Diffractometer, scan mode:Bruker APEX-II, φ and ω
2θmax, completeness:55.2°, >99%
N(hkl)measured, N(hkl)unique, Rint:20116, 4916, 0.039
Criterion for Iobs, N(hkl)gt:Iobs > 2 σ(Iobs), 4638
N(param)refined:317
Programs:SHELX [1], PLATON [2], Bruker programs [3],

Source of material

The title complex was prepared as following procedures: a methanolic solution (10.0 mL) of the ligand tri(2-pyridylmethyl)amine (TPA) (0.2 mmol) was added into a MeOH solution (10 mL) of ZnCl2 (0.2 mmol). Then, 2,5-dihydroxy-1,4-benzoquinone (DHBQ, 0.1 mmol) and triethylamine (0.4 mmol) as well as NaPF6 (0.2 mmmol) were added into the above mentioned mixture. The mixture was refluxed for 1 h, it was filtered and the resulting solution was kept at room temperature for about several days, producing brown block shaped crystals of the title compound with a yield of 82.0%. Elemental analysis calculated for C42H38F12N8O4P2Zn2: C, 44.27%; H, 3.36%; N, 9.83%; found: C, 44.32%; H, 3.31%; N, 9.88%.

Table 2

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2).

AtomxyzUiso*/Ueq
Zn10.840189(19)0.076767(13)0.711571(18)0.01657(9)
P10.38403(5)0.08552(3)0.78740(5)0.02214(13)
F10.32313(17)0.15444(10)0.86378(14)0.0519(5)
F20.44543(13)0.01763(9)0.70837(12)0.0364(3)
F30.37593(15)0.14588(8)0.67702(12)0.0403(4)
F40.50830(14)0.12388(11)0.82069(14)0.0486(4)
F50.39376(14)0.02541(9)0.89594(11)0.0392(4)
F60.26042(13)0.04717(11)0.75133(14)0.0436(4)
N10.72189(14)−0.02089(10)0.73550(14)0.0182(3)
N20.97244(14)0.13182(10)0.60921(14)0.0185(3)
N30.73628(14)0.18529(10)0.67050(14)0.0179(3)
N40.77588(14)0.04880(10)0.53041(13)0.0165(3)
C10.75156(18)−0.04034(12)0.52928(17)0.0201(4)
H1A0.8233−0.07030.51640.024*
H1B0.6977−0.05300.46600.024*
C20.69974(17)−0.06798(12)0.64217(17)0.0185(4)
C30.63657(18)−0.14046(12)0.64886(18)0.0225(4)
H30.6211−0.17160.58270.027*
C40.59659(18)−0.16590(13)0.75589(19)0.0253(4)
H40.5544−0.21460.76260.030*
C50.62045(18)−0.11788(13)0.85231(18)0.0243(4)
H50.5952−0.13390.92500.029*
C60.68276(17)−0.04541(13)0.83860(18)0.0220(4)
H60.6979−0.01260.90320.026*
C70.86314(18)0.07390(12)0.44532(17)0.0201(4)
H7A0.82350.09880.37920.024*
H7B0.90370.02530.41820.024*
C80.95180(16)0.13461(12)0.49463(17)0.0183(4)
C91.01453(18)0.18676(13)0.42339(18)0.0240(4)
H90.99930.18800.34400.029*
C101.10015(19)0.23688(13)0.4723(2)0.0278(5)
H101.14190.27310.42640.033*
C111.12267(18)0.23240(13)0.5900(2)0.0266(4)
H111.18060.26480.62440.032*
C121.05761(17)0.17906(13)0.65541(18)0.0226(4)
H121.07320.17560.73460.027*
C140.67972(16)0.18154(12)0.56769(16)0.0172(4)
C130.66592(17)0.09603(12)0.51756(17)0.0193(4)
H13A0.60400.06730.55700.023*
H13B0.64430.10000.43620.023*
C150.63544(17)0.25110(12)0.51242(17)0.0205(4)
H150.59720.24670.44100.025*
C160.64919(17)0.32732(13)0.56570(18)0.0228(4)
H160.62140.37500.53000.027*
C170.70498(18)0.33115(13)0.67285(18)0.0239(4)
H170.71380.38130.71110.029*
C180.74750(17)0.25896(12)0.72232(17)0.0204(4)
H180.78520.26180.79420.024*
C191.04370(18)−0.07384(12)0.94386(17)0.0194(4)
H191.0702−0.12130.90760.023*
C200.98441(16)−0.01355(12)0.87799(16)0.0180(4)
C210.93671(16)0.06383(12)0.93883(17)0.0181(4)
O10.88071(12)0.11481(9)0.87468(12)0.0204(3)
O20.96676(12)−0.01778(9)0.77056(11)0.0203(3)

Experimental details

All H atoms bond to C atoms were introduced using the HFIX command in the SHELXL program [1], with the value of 0.93 Å or 0.96 Å for C—H bond distances. All H atoms were allowed for as riding atoms with Uiso(H) = 1.2Ueq(C) for hydrogen atoms. The structure was checked using PLATON [2].

Comment

It is well known that the design and synthesis of molecule-based functional materials with interesting topological molecular structures and novel properties have been paid much attentions in the past several decades [4], [5], [6], [7]. Up to date, a larger number of new compounds have been prepared and their structures have been investigated in detail, especially their crystal structures have been determined through single crystal X-ray diffraction technique, which provides important basis for the clear elucidation of new phenomenon and full establishment of relationship between structure and property. Futhermore, some new important scientific results involving magnetic, optical, catalytic and electric properties and pure structure science have been reported [8], [9], [10]. For the design of new complexes the selection of suitable coordination ligands and the central metal ions as well as the bridging ligands usually play important roles. Multi-nitrogen organic compounds are common ligands which have been widely investigated. In these tris(2-pyridylmethyl)amine ligand (TPA) four nitrogen atoms have been usually exploited as capping tetradentate ligands for assembling low-dimensional complexes [11], [12], [13]. In addition, 2,5-dihydroxy-1,4-benzoquinone (DHBQ) and its derivatives can be employed as the bridging ligands [14, 15] . Herein, we report the crystal structure of a new 2,5-dioxy-1,4-benzoquinone-bridged binuclear complex C42H38F12N8O4P2Zn2 using TPA terminal capping ligand.

The asymmetric unit consists of half of a cationic complex and one hexafluorophosphate anion. In the dinuclear title Zn(II) complex DHBQ2− acts as bridging and tetradentate TPA as the terminal capping ligand. Its structure consists of the cationic [Zn2(TPA)2(DHBQ)]2+ unit and two PF6 as the counter anions. The Zn(II) ion in the title complex is six-coordinated by four nitrogen atoms from the capping ligand TPA and two oxygen atoms of DHBQ2− ligand at two cis positions, forming a distorted octahedral coordination geometry. The Zn—Npyridine bond lengths are very similar and are within the narrow scope of 2.1073(17) to 2.1735(16) Å, which are slightly shorter than that of the Zn—Namine bond length of 2.2519(16) Å [12]. The Zn—O bond length is 2.0282(14) Å, which is significantly shorter than those of the neighboring Zn—Obenzoquinone bond length (2.2111(14) Å) [13]. The two C—O bond lengths are 1.255(2) Å and 1.276(2) Å, respectively. The three important bond angles around the Zn(II) ion are 169.58(6)° for O2—Zn1—N3, 171.84(6)° for O1—Zn1—N4 and 148.48(6)° for N1—Zn1—N2. The bond angle of O1—Zn1—O2 is 77.68(6)°. The above mentioned bond parameters clearly indicate that the Zn(II) ion adopts significantly distorted octahedral geometry. All the bond parameters in the title complex are comparable with those of complex C25H22Cl2N4O5Zn [16].

Acknowledgement

This work was supported by the Fundamental Research Funds for the Central Universities (2015QNA24).

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Received: 2016-12-13
Accepted: 2017-5-3
Published Online: 2017-5-26
Published in Print: 2017-7-26

©2017 Li Nan et al., published by De Gruyter, Berlin/Boston.

This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 3.0 License.

Artikel in diesem Heft

  1. Cover and Frontmatter
  2. Crystal structure of poly[diaqua-(μ2-4,4′-bipyridine-κ2N:N′)manganese(II)] bis(4-chlorobenzenesulfonate) – 4,4′-bipyridine – water (1/1/2) C42H40Cl2MnN6O10S2
  3. The crystal structure of 1,2-bis[2-methyl-5-(3-cyanophenyl)-3-thienyl]-3,3,4,4,5,5-hexafluoro-cyclopent-1-ene, C29H16F6N2S2
  4. Crystal structure of the first characterized polymeric copper and sodium complex diaqua-(tris-acetato-κO,O′)(μ2-acetato-κO′′)dinatrium copper(II) monohydrate, C8H18CuNa2O11
  5. The crystal structure of the Schiff base (E)-2,6-diisopropyl-N-(pyridin-3-yl-methylene)aniline, C18H22N2
  6. Crystal structure of methyl 2,7,7-trimethyl-4-(4-nitrophenyl)-5-oxo-1,4,5,6,7,8-hexahydro-quinoline-3-carboxylate, C20H22N2O5
  7. Crystal structure of bis(1,3-bis(diphenylphosphino)propane-κ2P,P′)silver(I) trifluorosulfonate–methanol (1:0.5), [Ag(C27H26P2)]SO3CF3⋅0.5CH3OH
  8. Crystal structure of μ-1,4-bis(diphenylphosphine)butane-2,9-dimethyl-1,10-phenanthroline-κ2N:N′-bis(cyano-κC)dicopper(I)]-water, C58H56Cu2N6O2P2
  9. Crystal structure of N2,N6-bis(1-hydrazinyl-2-methyl-1-oxopropan-2-yl) pyridine-2,6-dicarboxamide, C15H23N7O4
  10. Crystal structure of 1,3-dimethyl-2-phenyl-1H-perimidin-3-ium iodide, C19H17IN2
  11. Crystal structure of diaqua-(2,2′-(butane-1,4-diyl)-bis(5-carboxy-1H-imidazole-4-carboxylato)-κ4O,O′,N,N′)cadmium(II) monohydrate, C14H18O11N4Cd
  12. Crystal structure of ethyl (E)-3-(cyclopropylamino)-2-(2,4-dichloro-5-fluorobenzoyl) acrylate, C15H14Cl2FNO3
  13. Crystal structure of bis-(1-(4-chlorophenyl)-3-phenyl-4-thenoyl-1H-pyrazol-5-ol-κ2O,O′)-(N,N-dimethylformamide)zinc(II), C43H31Cl2N5O5S2Zn
  14. Crystal structure of tetrakis(μ3-2-(N-(2-hydroxyethyl)amino)ethoxo)-tetrachloro-tetra-cobalt(II) methanol solvate, C17H44Cl4Co4N4O9
  15. Crystal structure of 3-amino-1-(4-bromophenyl)-9-methoxy-1H-benzo[f]chromene-2-carbonitrile, C21H15BrN2O2
  16. Crystal structure of 2-amino-4-(4-isopropyl-phenyl)-3-cyano-5-oxo-4H,5H-pyrano[3,2-c]chromene, C22H18N2O3
  17. Crystal structure of 3-amino-8-methoxy-1-(4-methoxy phenyl)-1H-benzo[f]chromene-2-carbonitrile, C22H18N2O3
  18. Crystal structure of monoaqua-[6,6′-((1E,1′E)-(1,2-phenylene bis(azanylylidene))bis(methanylylidene))bis(4-bromo-2-nitrophenolato-κ4N,N′,O,O′)]zinc(II), C20H12Br2N4O7Zn
  19. Crystal structure of 11-(4-(dimethylamino)phenyl)-17-hydroxy-13-methyl-17-(prop-1-yn-1-yl)-1,2,6,7,8,11,12,13,14,15,16,17-dodecahydro-3H-cyclopenta[a]phenanthren-3-one – acetonitril (1/2), C33H41N3O2
  20. Crystal structure of tert-butyl (phenylsulfinyl)carbamate, C11H15NO3S
  21. Crystal structure of catena-poly{diaqua-bis(3-(1H-1,2,4-triazol-1-yl)benzoato-κ2O:N)copper(II)} monohydrate, C18H18CuN6O7
  22. Crystal structure of tetraaqua-bis(3-(4H-1,2,4-triazol-4-yl)benzoato-κN)cobalt(II), C18H20CoN6O8
  23. The crystal structure of 4-bromo-N-cyclopropyl-2,5-difluorobenzenesulfonamide, C9H8BrF2NO2S
  24. Crystal structure of ([3,3′-bipyridine]-6,6′-dicarboxylato-κ2O:O′)-bis(1,2-bis(4-pyridyl)ethane-κ2N:N′)disilver(I) dihydrate, C37H35Ag2N5O6
  25. The crystal structure of (4-(1H-1,2,4-triazol-1-yl)benzoato-κN)-[4-(1H-1,2,4-triazol-1-yl)benzoic acid-κN]silver(I), C18H13AgN6O4
  26. Crystal structure of 3-(4-methoxyphenyl)-1-(4-methylphenyl)prop-2-en-1-one, C17H16O2
  27. Crystal structure of bis(2-((E)-((4-((E)-1-(ethoxyimino)ethyl)phenyl)imino)methyl)-5-methoxyphenolato-κ2O,N)copper(II), C36H38CuN4O6
  28. Crystal structure of poly[1,2-bis(1,2,4-triazol-4-yl)ethane-κ2N:N′]silver(I) bromate monohydrate]silver(I), C6H10AgBrN6O4
  29. The crystal structure of 2,3,5-triphenyl-2,3-dihydro-1H-tetrazol-1-ium 2,3-dioxoindoline-5-sulfonate, C27H19N5O5S
  30. Crystal structure of 3-(2-amino-1,3-selenazol-4-yl)-2H-chromen-2-one – dimethylformamide (1/1), C15H15N3O3Se
  31. Crystal structure of diethyl 3,3′-(diazene-1,2-diyl)(E)-dibenzoate, C18H18N2O4
  32. Crystal structure of cis-bis((1H-benzimidazol-2-yl)methanol-κN,O)-bis(isothiocyanato-κN)nickel(II), C18H16N6NiO2S2
  33. Crystal structure of bis(2-(2′-hydroxy-5′-methoxyphenyl)-1H-benzimidazole)boron – tetrahydrofuran (1/1), C36H37N4O6B
  34. Crystal structure of poly[aqua-bis(nitrato-κ2O,O′)-(μ3-1,3-benzimidazol-3-ium-1,3-diacetato-κ4O,O′:O′′:O′′′)dysprosium(III)], C11H11DyN4O11
  35. Crystal structure of n-butyl-tris(dicyclo-hexylamido)hafnium(IV), C40H75HfN3
  36. Crystal structure of (E)-1-[1-(3-chloro-4-fluoro-phenyl)ethylidene]-2-(2,4-dinitrophenyl)hydrazine, C28H20Cl2F2N8O8
  37. The crystal structure of ethyl 4-((2-hydroxybenzyl)amino)benzoate, a Schiff base, C16H17NO3
  38. Crystal structure of 3-(2-(4-isobutylphenyl)propanoyl)-1-methylimidazolidine-2,4-dione, C17H22N2O3
  39. Crystal structure of poly[(μ3-2-(pyrazin-2-ylthio)acetato-κ3N:O:S)silver(I)], C6H5AgN2O2S
  40. Crystal structure of (E)-1-(3-((E)-((2-hydroxynaphthalen-1-yl)methylene)amino)phenyl)ethanone O-benzyl oxime, C26H22N2O2
  41. Crystal structure of (E)-2,3-dihydroxybenzaldehyde O-(2-((((E)-1-(2,5-dihydroxyphenyl)ethylidene)amino)oxy)ethyl) oxime monohydrate, C17H20N2O7
  42. Crystal structure of 4-(chloromethyl)-3-nitrobenzoic acid, C8H6ClNO4
  43. Crystal stucture of 4-((10H-phenothiazin-10-yl)methyl)-2,6-di-tert-butylphenol, C27H31NOS
  44. The crystal structure of ethyl 1-(4-nitrophenyl)-5-(trifluoromethyl)-1H-pyrazole-4-carboxylate, C13H10F3N3O4
  45. Crystal structure of catena-poly[di-(μ3-oxido-κ3O:O:O)-tetraoxido-(μ2-5′-(pyrazin-2-yl)-1H,2′H-3,3′-bi(1,2,4-triazole)-κ2N:N′)dimolybdenum(VI)], C8H6Mo2N8O6
  46. Crystal structure of (3,6-dioxocyclohexa-1,4-diene-1,4-bis(olato)-κ4O,O′:O′′,O′′′)-bis(tris(2-pyridylmethyl)amine-κ4N,N′,N′′,N′′′))-dizinc(II) bis(hexafluorophosphate(V)), C42H38F12N8O4P2Zn2
  47. Crystal structure of catena-poly[hexakis(μ2-2-acetylphenolato-κ3O:O,O′)trimanganese(II)], C48H42Mn3O12
  48. The crystal structure of 2,2-difluoro-4-(trifluoromethyl)-2,5-dihydro-[1,3,2]dioxaborinino[5,4-c]chromen-3-ium-2-uide, C11H6BF5O3
  49. Crystal structure of methyl (E)-2-(4-(diethylamino)-2-hydroxybenzylidene)hydrazine-1-carboxylate, C13H19N3O3
  50. The crystal structure of tert-butyl 2,6-dihydropyrrolo[3,4-c]pyrazole-5(4H)-carboxylate, C10H15N3O2
  51. Crystal structure of 1,1-bis(η5-adamantylcyclopentadienyl)-3-phenyl-2-trimethylsilyl-2,3-dihydroisotitanazole, C42H55NSiTi
  52. Crystal structure of 2-(4-(2-(4-benzylpiperazin-1-yl)ethyl)benzyl)isoindoline-1,3-dione, C28H29N3O2
  53. Important impurity of Flupirtine – a single crystal study on ethyl (6-amino-5-((ethoxycarbonyl)amino)pyridin-2-yl)(4-fluorobenzyl)carbamate, C18H21FN4O4
  54. Crystal structure of ethyl 3-(4-methoxyphenyl)-1-(2-(4-methoxyphenyl)-2-oxoethyl)-1H-pyrazole-5-carboxylate, C22H22N2O5
  55. Crystal structure of 2,3,9,10-tetramethoxy-5,6-dihydroisoquinolino[2,1-b]isoquinolin-7-ium 5-hydroxy-3-(4-hydroxyphenyl)-4-oxo-4H-chromen-7-olate methanol solvate, C37H35N1O10
  56. The crystal structure of the inner salt of 2-[(aminoiminomethyl)amino]ethylcarbamic acid [systematic name: (2-((diaminomethylene)ammonio)ethyl)carbamate], C4H10N4O2
  57. Crystal structure of (8-hydroxy-5-nitroquinolinium) perchlorate – 8-hydroxy-5-nitroquinoline (1/1), C18H13ClN4O10
  58. The crystal structure of (5-methyl-1,2,4-oxadiazol-3-yl)ferrocene, C13H12FeN2O
  59. Crystal structure of methyl 1-(2-(fluorosulfonyl)ethyl)-2-oxocyclopentanecarboxylate, C9H13FO5S
  60. Crystal structure of the triclinic modification of 1-methyl-4-nitroimidzole, C4H5N3O2
  61. Corrigendum
  62. Crystal structure of 4-bromo-2-(1H-pyrazol-3-yl)phenol, C9H7BrN2O
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