Home Physical Sciences Crystal structure of 2,3,9,10-tetramethoxy-5,6-dihydroisoquinolino[2,1-b]isoquinolin-7-ium 5-hydroxy-3-(4-hydroxyphenyl)-4-oxo-4H-chromen-7-olate methanol solvate, C37H35N1O10
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Crystal structure of 2,3,9,10-tetramethoxy-5,6-dihydroisoquinolino[2,1-b]isoquinolin-7-ium 5-hydroxy-3-(4-hydroxyphenyl)-4-oxo-4H-chromen-7-olate methanol solvate, C37H35N1O10

  • Yanjie Zhang , Benyong Lou EMAIL logo , Yali Huang , Guocai Zheng and Qi Lin
Published/Copyright: May 26, 2017

Abstract

C37H35N1O10, triclinic, P1̅ (no. 2), a = 12.039(8) Å, b = 12.353(9) Å, c = 12.938(9) Å, α = 102.786(3)°, β = 111.865(6)°, γ = 105.173(7)°, V = 1610.6(19) Å3, Z = 2, Rgt(F) = 0.0567, wRref(F2) = 0.1392, T = 293 K.

CCDC no.:: 1547648

The asymmetric unit of the title crystal structure is shown in the figure. Tables 1 and 2 contain details on crystal structure and measurement conditions and a list of the atoms including atomic coordinates and displacement parameters.

Table 1

Data collection and handling.

Crystal:Yellow prism
Size:0.40 × 0.20 × 0.20 mm
Wavelength:Mo Kα radiation (0.71073 Å)
μ:1.0 cm−1
Diffractometer, scan mode:Rigaku CCD, profile fitting-scans
2θmax, completeness:55°, >98%
N(hkl)measured, N(hkl)unique, Rint:17459, 7338, 0.037
Criterion for Iobs, N(hkl)gt:Iobs > 2 σ(Iobs), 4463
N(param)refined:450
Programs:SHELX [1], CrystalClear [2]
Table 2

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2).

AtomxyzUiso*/Ueq
O10.19705(15)0.41866(12)−0.04936(11)0.0497(4)
O20.16415(16)0.11830(13)0.04068(13)0.0571(4)
O30.10360(15)−0.00479(12)−0.17636(13)0.0508(4)
O40.08866(14)0.20298(13)−0.44399(11)0.0520(4)
O50.24153(17)0.39868(16)0.55828(12)0.0626(4)
O60.20665(14)−0.22059(13)−0.08053(13)0.0586(4)
O70.38751(17)−0.25844(16)−0.14829(14)0.0730(5)
O80.56395(14)0.32428(13)0.81085(13)0.0576(4)
O90.75132(13)0.32190(13)0.76184(13)0.0611(4)
O10−0.15321(19)0.2125(2)−0.53819(18)0.0884(6)
N10.31940(16)0.00540(15)0.25674(15)0.0459(4)
C10.2090(2)0.42017(18)0.05954(17)0.0449(5)
H10.22640.49320.11410.054*
C20.19792(18)0.32621(16)0.09530(16)0.0377(4)
C30.16968(18)0.20967(17)0.01147(16)0.0382(4)
C40.11751(17)0.09892(16)−0.19870(16)0.0366(4)
C50.09717(18)0.09813(17)−0.31065(16)0.0398(4)
H50.07490.0265−0.36990.048*
C60.10948(18)0.20442(18)−0.33766(16)0.0399(5)
C70.14537(19)0.31216(18)−0.24516(17)0.0418(5)
H70.15590.3837−0.25960.050*
C80.16454(18)0.31098(16)−0.13445(16)0.0366(4)
C90.15081(17)0.20653(16)−0.10553(15)0.0344(4)
C100.21225(19)0.34236(17)0.21779(16)0.0384(4)
C110.3143(2)0.43618(19)0.31671(17)0.0510(5)
H110.37830.48770.30710.061*
C120.3234(2)0.4552(2)0.42972(18)0.0548(6)
H120.39240.51930.49460.066*
C130.1180(2)0.26720(17)0.23567(17)0.0421(5)
H130.04810.20380.17060.051*
C140.1260(2)0.28476(18)0.34761(17)0.0445(5)
H140.06190.23350.35730.053*
C150.2296(2)0.37864(18)0.44597(17)0.0455(5)
C160.1529(3)−0.3471(2)−0.1092(3)0.0916(10)
H16A0.1697−0.3641−0.03720.137*
H16B0.1916−0.3854−0.15090.137*
H16C0.0611−0.3770−0.15880.137*
C170.4771(3)−0.2955(3)−0.1794(2)0.0863(9)
H17A0.5202−0.3285−0.12340.130*
H17B0.5398−0.2276−0.17760.130*
H17C0.4315−0.3553−0.25800.130*
C180.4303(2)−0.18132(19)−0.03613(19)0.0529(6)
C190.3368(2)−0.16566(18)−0.00399(19)0.0488(5)
C200.3753(2)−0.08678(18)0.11117(18)0.0445(5)
C210.5622(2)−0.1159(2)0.04518(19)0.0541(6)
H210.6245−0.12460.02170.065*
C220.6011(2)−0.04013(19)0.15723(19)0.0516(5)
H220.68890.00120.20910.062*
C230.50826(19)−0.02451(17)0.19458(18)0.0436(5)
C240.54026(19)0.04635(17)0.31044(18)0.0437(5)
H240.62700.08490.36620.052*
C250.2847(2)−0.06515(18)0.14712(19)0.0474(5)
H250.1974−0.10130.09260.057*
C260.44834(18)0.06076(17)0.34425(18)0.0416(5)
C270.47484(18)0.12917(16)0.46515(17)0.0405(5)
C280.37452(19)0.12398(17)0.49562(19)0.0446(5)
C290.2379(2)0.0440(2)0.4047(2)0.0557(6)
H29A0.2194−0.03580.40880.067*
H29B0.17840.07520.42230.067*
C300.2183(2)0.0369(2)0.2818(2)0.0608(6)
H30A0.1336−0.02320.22390.073*
H30B0.22120.11360.27350.073*
C310.4021(2)0.18956(18)0.61024(19)0.0472(5)
H310.33450.18810.62910.057*
C320.60373(19)0.19681(17)0.55377(18)0.0454(5)
H320.67140.20080.53450.054*
C330.62982(19)0.25668(17)0.66815(19)0.0449(5)
C340.5277(2)0.25674(17)0.69648(19)0.0450(5)
C350.4659(2)0.3534(2)0.8348(2)0.0679(7)
H35A0.40310.28200.82770.102*
H35B0.42420.38680.77860.102*
H35C0.50500.41080.91410.102*
C360.8588(2)0.3396(3)0.7370(2)0.0913(10)
H36A0.85120.38160.68220.137*
H36B0.86040.26310.70250.137*
H36C0.93730.38580.80970.137*
C37−0.1391(4)0.3170(4)−0.5668(3)0.1244(14)
H37A−0.20600.3444−0.56420.187*
H37B−0.14560.2997−0.64540.187*
H37C−0.05600.3783−0.51020.187*
H30.124(3)0.025(2)−0.092(2)0.088(9)*
H10−0.069(3)0.205(3)−0.513(3)0.117(11)*
H5A0.179(3)0.324(3)0.555(3)0.111(11)*

Source of material

Palmatine chloride (systematic name: 2,3,9,10-tetramethoxy-5,6-dihydroisoquinolino[2,1-b]isoquinolin-7-ium chloride; 387 mg, 1 mmol) was dissolved in absolute methanol (30 mL) and NaOH (40 mg, 1 mmol) was added under stirring conditions. Genistein (systematic name: 5,7-dihydroxy-3-(4-hydroxyphenyl)-4H-chromen-4-one; 270 mg, 1 mmol) was then added. The mixture was stirred for 8 h and then filtered. The yellow powder was further recrystallized in absolute methanol and yellow block crystals were obtained after several days.

Experimental details

The structure was solved by direct methods and refined on F2 by full-matrix least-squares methods using the SHELXTL program package [1]. Hydrogen atoms bound to carbon atoms were located geometrically with Uiso(H) = 1.2 Ueq(C) or 1.5 Ueq(C). Hydrogen atoms bonded to oxygen were located by difference maps and the displacement factors were freely refined.

Discussion

Drug-drug molecular salts have been exploited as new crystal forms of active pharmaceutical ingredients [3]. Flavonoids are natural occurring polyphenolic compounds with health-prolonging effects such as antioxidant, antitumor and anti-inflammatory properties [4]. Genistein, a soy isoflavone, could enhance anti-cancer effects [5]. There are three hydroxyl groups in molecular structure of genistein in 5, 7 and 4′ positions, respectively. The hydroxyl group in the 7 position may easily lose its proton under basic conditions. Palmatine, a natural alkaloid, has antioxidant and anti-inflammatory properties [6]. Salt formation of palmatine and genistein gave rise to a 1:1 compound.

The title compound crystallizes in the triclinic space group P1̅ and contains one deprotonated genistein anion, one palmatine cation and one methanol in the asymmetric unit. Genistein lost its proton in 7-substituted hydroxyl O4 to become the genistein anion (cf. the figure). The hydroxyl group O3 is involved in intramolecular hydrogen-bonding interactions with O2 of —C = O group [O3…O2 = 2.595(3) Å]. O5 is involved in hydrogen bond with the phenolic anion [O5…O4A = 2.614(3) Å, A = x, y, z + 1], which resulted in an 1D hydrogen-bonded chain of genistein anion along the c axis. There is a dihedral angel of 49.11(7)° between the phenyl moiety (C10—C15) and pyran moiety (O1/C1—C2—C3/C8—C9) of genistein. There also exist hydrogen-bonding interactions between methanol and O4 of genistein anion [O10…O4 = 2.753(3) Å].

Award Identifier / Grant number: 21503105

Award Identifier / Grant number: 2015J01599

Funding statement: The authors are grateful to the grants from the National Natural Science Foundation of China (21503105), the Natural Science Foundation of Fujian Province (2015J01599) and Research Project of Minjiang University (MYK16004).

References

1 Sheldrick, G. M.: A short history of SHELX. Acta Crystallogr. A64 (2008) 112–122.10.1107/S0108767307043930Search in Google Scholar PubMed

2 Rigaku/MSC. CrystalClear. Rigaku/MSC Inc., The Woodlands, Texas, USA, 2000.Search in Google Scholar

3 Thorat, S. H.; Sahu, S. K.; Patwadkar, M. V.; Badiger, M. V.; Gonnade, R. G.: Drug-drug molecular salt hydrate of an anticancer drug gefitinib and a loop diuretic drug furosemide: an alternative for multidrug treatment. J. Pharm. Sci. 104 (2015) 4207–4216.10.1002/jps.24651Search in Google Scholar PubMed

4 Crozier, A.; Jaganath, I. B.; Clifford, M. N.: Dietaryphenolics: chemistry, bioavailability and effects on health. Nat. Prod. Rep. 26 (2009) 1001–1043.10.1039/b802662aSearch in Google Scholar PubMed

5 Zhou, R. J.; Yang, X. Q.; Wang, D.; Zhou, Q.; Xia, L.; Li, M. X.; Zeng, L. L.; Wang, G.; Yang, Z. Z.: Anti-tumor effects of all-trans retinoic acid are enhenced by genistein. Cell. Biochem. Biophys. 62 (2012) 177–184.10.1007/s12013-011-9279-0Search in Google Scholar PubMed

6 Kim, Y. M.; Ha, Y. M.; Jin, Y. C.; Shi, L. Y.; Lee, Y. S.; Kim, H. J.; Seo, H. G.; Choi, J. S.; Kim, Y. S.; Kang, S. S.: Palmatine from coptidis rhizoma reduces ischemia-reperfusion-mediated acute myocardial injury in the rat. Food. Chem. Toxicol. 47 (2009) 2097–2102.10.1016/j.fct.2009.05.031Search in Google Scholar PubMed

Received: 2016-12-31
Accepted: 2017-5-3
Published Online: 2017-5-26
Published in Print: 2017-7-26

©2017 Yanjie Zhang et al., published by De Gruyter, Berlin/Boston.

This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 3.0 License.

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  61. Corrigendum
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