Startseite (E)-2-((E)-4-(2,6,6-trimethylcyclohex-1-en-1-yl)but-3-en-2-ylidene)hydrazine-1-carbothioamide C14H23N3S1
Artikel Open Access

(E)-2-((E)-4-(2,6,6-trimethylcyclohex-1-en-1-yl)but-3-en-2-ylidene)hydrazine-1-carbothioamide C14H23N3S1

  • Zeng Rong , Huang Cong , Wu Yu-Fang , Peng Da-Yong ORCID logo EMAIL logo und Chen Shang-Xing EMAIL logo
Veröffentlicht/Copyright: 17. Juli 2023

Abstract

[C14H23N3S1], monoclinic, P21/c (no. 14), a = 15.1642(8) Å, b = 6.9215(3) Å, c = 15.2182(7) Å, β = 112.675(2)°, V = 1473.83(12) Å3, Z = 4, R gt (F) = 0.0453, wR ref (F 2) = 0.1240, T = 296(2) K.

CCDC no.: 2279145

Table 1 contains crystallographic data and Table 2 contains the list of the atoms including atomic coordinates and displacement parameters.

Table 1:

Data collection and handling.

Crystal: Colorless block
Size: 0.20 × 0.15 × 0.10 mm
Wavelength: Mo Kα radiation (0.71073 Å)
μ: 0.5 mm−1
Diffractometer, scan mode: Bruker APEX-II, φ and ω-scans
θ max, completeness: 25.5°, >99 %
N(hkl)measured, N(hkl)unique, R int: 20,046, 2727, 0.048
Criterion for I obs, N(hkl)gt: I obs > 2σ(I obs), 2291
N(param)refined: 167
Programs: Bruker programs [1], SHELX [2, 3], DIAMOND [4]
Table 2:

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2).

x y z U iso*/U eq
S1 0.58360 (3) 1.02285 (7) 0.42188 (3) 0.03531 (18)
N1 0.50633 (11) 0.8022 (2) 0.26928 (11) 0.0342 (4)
H1A 0.4696 0.7069 0.2372 0.041*
H1B 0.5397 0.8694 0.2437 0.041*
N2 0.45936 (11) 0.7384 (2) 0.39255 (11) 0.0322 (4)
H2 0.4584 0.7677 0.4484 0.039*
N3 0.40750 (11) 0.5831 (2) 0.34135 (11) 0.0316 (4)
C5 0.24128 (13) 0.2112 (3) 0.33660 (13) 0.0312 (4)
H5 0.2358 0.2378 0.3955 0.037*
C3 0.35447 (13) 0.4865 (3) 0.37571 (13) 0.0305 (4)
C4 0.30079 (13) 0.3293 (3) 0.31560 (13) 0.0316 (4)
H4 0.3083 0.3083 0.2572 0.038*
C1 0.51149 (13) 0.8445 (3) 0.35580 (13) 0.0299 (4)
C6 0.18361 (13) 0.0484 (3) 0.28366 (13) 0.0308 (4)
C12 0.17125 (14) 0.0089 (3) 0.17978 (14) 0.0341 (4)
C7 0.14312 (13) −0.0674 (3) 0.32955 (14) 0.0346 (4)
C2 0.34619 (16) 0.5341 (3) 0.46823 (14) 0.0399 (5)
H2A 0.4093 0.5688 0.5156 0.060*
H2B 0.3216 0.4215 0.4907 0.060*
H2C 0.3023 0.6430 0.4590 0.060*
C14 0.26476 (16) −0.0666 (3) 0.17541 (16) 0.0433 (5)
H14A 0.2549 −0.0941 0.1091 0.065*
H14B 0.2842 −0.1852 0.2132 0.065*
H14C 0.3149 0.0313 0.2012 0.065*
C13 0.13847 (16) 0.1900 (3) 0.11738 (14) 0.0436 (5)
H13A 0.1910 0.2835 0.1351 0.065*
H13B 0.0838 0.2480 0.1269 0.065*
H13C 0.1196 0.1543 0.0503 0.065*
C8 0.14789 (16) −0.0286 (3) 0.42942 (15) 0.0437 (5)
H8A 0.2129 −0.0535 0.4756 0.065*
H8B 0.1029 −0.1138 0.4428 0.065*
H8C 0.1309 0.1064 0.4344 0.065*
C11 0.09132 (15) −0.1407 (3) 0.13491 (15) 0.0439 (5)
H11A 0.0287 −0.0784 0.1218 0.053*
H11B 0.0924 −0.1841 0.0734 0.053*
C9 0.08943 (16) −0.2500 (3) 0.28763 (17) 0.0456 (5)
H9A 0.0207 −0.2294 0.2735 0.055*
H9B 0.1122 −0.3545 0.3355 0.055*
C10 0.10086 (16) −0.3140 (3) 0.19764 (18) 0.0499 (6)
H10A 0.1643 −0.3745 0.2137 0.060*
H10B 0.0512 −0.4106 0.1638 0.060*

1 Source of materials

β–Ionone (20 mmol, 3.85 g) and thiosemicarbazide (24 mmol, 2.19 g) were introduced in a flask and dissolved in ethanol, then diluted hydrochloric acid (2.87 mol, 3 mL) was added and refluxed at 80 °C for 1 h. The reaction was monitored by TLC analysis until the starting material disappears completely. It was recrystallized from 70 % ethanol. After filtration and drying, compound (E)-2-((E)-4-(2,6,6-trimethylcyclohex-1-en-1-yl)but-3-en-2-ylidene)hydrazine-1-carbothioamide was obtained.

2 Experimental details

All H atoms were included in calculated positions and refined as riding atoms, with C–H = 0.90–0.97 Å with Uiso(H) = 1.5 Ueq(C) for methyl H atoms and 1.2 Ueq(C) for all other H atoms.

3 Comment

Thiosemicarbazone compounds have good fungicide, insecticidal, antiviral and other biological activities, and occupy an important position in the pesticide market [5], [6], [7]. For instance, Tabatabaee M. et al. have reported the structure of 4–Amino-6-methyl-3-thio-3,4-dihydro-1,2,4-triazin-5(2H)-one [8]. Jouad E. M. et al. have reported the structure and antifungal activity of nickel(II) complexes with 5-methyl-2-furfural thiosemicarbazone [9]. However, most of the compounds in these studies are heteroatom containing five membered ring thiosemicarbazones structures [10, 11], while there are relatively few studies on six membered ring thiosemicarbazones structures. Hashimoto H. et al. have reported the structure of β-ionylidene-2,4-dinitrophenylhydrazone [12].

In the molecules of the title structure bond lengths and angles are very similar to those given in the literature for thiosemicarbazones derivative [13]. In the title structure, the cyclohexene portion is in a half-chair configuration. The dihedral angle formed by the C8–C7–C6–C12 plane and the C10–C11–C12 plane is 45.33(17)°. Due to ππ conjugation, the non hydrogen atoms of thiosemicarbazone moiety are approximately planar. The dihedral angle formed by the carbon–carbon double bond group C4–H4–C5 plane, the carbon-nitrogen double bond group C2–C3–N3 plane and the carbon-sulfur double bond group N2–C1–S1 plane are 1.3(2)°, 6.1(2)° and 7.4(2)°, respectively. The torsion angles of C7–C6–C5–C4, C6–C5–C4–C3, C5–C4–C3–C2, C5–C4–C3–N3, C4–C3–N3–N2, C3–N3–N2–C1, N3–N2–C1–N1 and N3–N2–C1–S1 are 168.3(2)°, −179.7(2)°, −1.3(3)°, −179.7(2)°, 178.4(2)°, −177.3(2)°, 3.9(3)° and −174.4(1)°, respectively. In the title structure, there are abundant intramolecular hydrogen bonds (N2–H2⋯S1, N1–H1B⋯N3 and C2–H2A⋯S1) and intermolecular hydrogen bond (N1–H1A⋯S1). The intermolecular hydrogen bond (N1–H1A⋯S1) link adjacent molecules into one-dimensional hydrogen bond chain structure.


Corresponding authors: Peng Da-Yong, Key Laboratory of Chemical Utilization of Plant Resources of Nanchang, Nanchang, People’s Republic of China; College of Chemistry and Material Science, Jiangxi Agricultural University, Nanchang 330045, People’s Republic of China; and East China Woody Fragrance and Flavor Engineering Research, Center of National Forestry and Grassland Administration, Camphor Engineering Research Center of NFGA, Nanchang, Jiangxi Province, People’s Republic of China, E-mail: ; and Chen Shang-Xing, College of Forestry, Jiangxi Agricultural University, Nanchang 330045, People’s Republic of China; and East China Woody Fragrance and Flavor Engineering Research, Center of National Forestry and Grassland Administration, Camphor Engineering Research Center of NFGA, Nanchang, Jiangxi Province, People’s Republic of China, E-mail:

Acknowledgment

X-ray data were collected at Instrumental Analysis Center Nanchang Hangkong University, Nanchang, 330063, People’s Republic of China

  1. Author contributions: All the authors have accepted responsibility for the entire content of this submitted manuscript and approved submission.

  2. Research funding: This work was supported by the National Natural Science Foundation of China (No. 31760295), Major science and technology R & D special project (20203ABC28W016), Jiangxi Province Training Program Leading Talents Project (20204BCJ22022) and Central Finance Forestry Science and Technology Promotion Demonstration Fund Project(JXTG(2021)01).

  3. Conflict of interest statement: The authors declare no conflicts of interest regarding this article.

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Received: 2023-05-16
Accepted: 2023-07-04
Published Online: 2023-07-17
Published in Print: 2023-10-26

© 2023 the author(s), published by De Gruyter, Berlin/Boston

This work is licensed under the Creative Commons Attribution 4.0 International License.

Artikel in diesem Heft

  1. Frontmatter
  2. New Crystal Structures
  3. The crystal structure of (N-([1,1′:4′,1″-terphenyl]-4,4′-diethyl)-2-(bis(pyridin-2-ylmethyl)amino)acetamide-κ4N,N,N″, O)tri(nitrato-kO, O′) samarium(III) - methanol - acetonitrile (1/1/1), C40H39SmN8O14
  4. The crystal structure of 6,6′-(((2-(dimethylamino)ethyl)azanediyl)bis(methylene))bis(2-chloro-4-methyl phenolate-κ4N,N,O,O′)-(pyridine-2,6-dicarboxylato-N,O,O′)-titanium(IV), C27H27Cl2N3O6Ti
  5. N′-[(1E)-(4–Fluorophenyl)methylidene]adamantane-1-carbohydrazide, C18H21FN2O
  6. Crystal structure of 4-bromo-3-nitro-1H-pyrazole-5-carboxylic acid monohydrate, C4H2N3BrO4·H2O
  7. Crystal structure of dipyridine-k1N-tris(2,2,6,6-tetramethyl-5-oxohept-3-en-3-olato-k2O,O′)dysprosium(III), DyC43H67O6N2
  8. Crystal structure of cyclo[tetraiodido-bis{μ2-1-[(benzotriazol-1-yl)methyl]-1-H-1,3-(2-isopropyl-imidazol)-k2N:N}dicadmiun(II)], C26H30N10Cd2I4
  9. The crystal structure of tert-butyl (E)-3-(2-(benzylideneamino)phenyl)-1H-indole-1-carboxylate, C26H24N2O2
  10. The crystal structure of 4-(3-carboxy-1-cyclopropyl-6-fluoro-8-methoxy-4-oxo-1,4- dihydroquinolin-7-yl)-2-methylpiperazin-1-ium 2,5-dihydroxybenzoate methanol solvate, C27H32FN3O9
  11. Crystal structure of (μ2-1-(4,4′-bipyridine-κ2N:N′)-bis[diaqua-(4-iodopyridine-2,6-dicarboxylato-κ3O,N,O′)–cobalt(II)], C24H20Co2I2N4O12
  12. The crystal structure of dimethyl 4,4′-(10,20-diphenylporphyrin-5,15-diyl)dibenzoate dichloromethane solvate, C49H36N4O4Cl2
  13. (E)-2-((E)-4-(2,6,6-trimethylcyclohex-1-en-1-yl)but-3-en-2-ylidene)hydrazine-1-carbothioamide C14H23N3S1
  14. The crystal structure of [1-(4-(trifluoromethyl)phenyl)-3,4-dihydroquinolin-2(1H)-one], C16H12F3NO
  15. Crystal structure of (E)-2-amino-N′-((3-hydroxy-5-(hydroxymethyl)-2-methylpyridin-4-yl)methylene)benzohydrazide – dimethylformamide – water (1/1/2), C15H16N4O3·C3H7NO·2H2O
  16. Crystal structure of 3-(4-bromophenyl)-5-methyl-1H-pyrazole, C10H9BrN2
  17. Crystal structure of 1,10-phenanthrolinium bromide dihydrate, C12H9N2Br
  18. Crystal structure of N-(4′-chloro-[1,1′-biphenyl]-2-yl)formamide, C13H10ClNO
  19. The crystal structure of nitroterephthalic acid, C8H5NO6
  20. Crystal structure of (2-((4-bromo-2,6-dichlorophenyl)amino)phenyl) (morpholino)methanone, C17H15BrCl2N2O2
  21. Crystal structure of tetraaqua-bis(ethanol-κO)-tetrakis(μ2-trifluoroacetate-κ2O:O′)-bis(trifluoroacetate-κ2O)digadolinium(III) Gd2C16H20O18F18
  22. The crystal structure of dimethyl 4,4′-[10,20-bis(2,6-difluorophenyl)porphyrin-5,15-diyl]dibenzoate chloroform solvate, C50H32Cl6F4N4O4
  23. The crystal structure of N,N′-((nitroazanediyl)bis(methylene))diacetamide, C6H12O4N4
  24. The crystal structure of [bis(2,2′-bipyridine-6-carboxylato-κ3N,N,O)magnesium(II)]dihydrate, C22H18N4O6Mg
  25. Crystal structure of poly[diaqua-(bis(μ2-1,4-bis(imidazol-1-ylmethyl)benzene)-κ2N,N′] cobalt(II)-tetraqua-bis(1,4-bis(imidazol-1-ylmethyl)benzene)-κ1N)-cobalt(II) di(2,5-thiophenedicarboxylate) dihydrate, C68H76Co2N16O16S2
  26. Crystal structure of poly[chlorido-μ2-chlorido-(μ2-1-[(2-ethyl-4-methyl-1H-imidazol-1-yl)methyl]-1H-benzotriazole-κN:N’)cadmium(II)], C13H15CdN5Cl2
  27. The crystal structure of (4-hydroxybenzenesulfonate)-k1O-6,6′-((1E,1′E)- (ethane-1,2-diylbis(azaneylylidene))bis(methaneylylidene)) bis(2-methoxyphenol)-κ2N,N,μ2O,O2O, O)-(methanol)-cobalt(II) sodium(I), C25H27CoN2NaO9S
  28. Crystal structure of (1-methyl-3-(trifluoromethyl)-1H-pyrazol-4-yl)(4-((2-methyl-6-(trifluoromethyl)pyrimidin-4-yl)amino)piperidin-1-yl)methanone, C17H18F6N6O
  29. Crystal structure of bis{[(cyclohexylimino)(phenylimino)-l5-(methyl)diethylazane-κ2N:N′]-(ethyl)-zinc(II)]}, C38H62N6Zn2
  30. Crystal structure of 2-[(4-bromobenzyl)thio]-5-(5-bromothiophen-2-yl)-1,3,4-oxadiazole, C13H8Br2N2OS2
  31. Crystal structure of 10-methoxy-7,11b,12,13-tetrahydro-6H-pyrazino [2′,3′:5,6]pyrazino[2,1-a]isoquinoline, C15H16N4O
  32. The crystal structure of 1-propyl-2-nitro-imidazole oxide, C6H9N3O3
  33. The crystal structure of 3-nitrobenzene-1,2-dicarboxylic acid–2-ethoxybenzamide (1/1), C17H16N2O8
  34. The structure of RUB-1, (C8H16N)6[B6Si48O108], a boron containing levyne-type zeolite, occluding N-methyl-quinuclidinium in the cage-like pores
  35. The crystal structure of diaqua-(naphthalene-4,5-dicarboxylate-1,8-dicarboxylic anhydride1O)-(4′-(4-(1H-benzimidazolyl-1-yl)phenyl)-2,2′:6′,2″-terpyridine-κ3N,N′,N″)–manganese(II) dihydrate, C42H27MnN5O9·2H2O
  36. Crystal structure of 6,6′-((1E,1′E)-hydrazine-1,2-diylidenebis(methanylylidene))bis (3-(3-bromopropoxy)phenol), C20H22Br2N2O4
  37. The crystal structure of 3-(2-hydroxyphenyl)-4-phenyl-6-(p-tolyl)-2H-pyran-2-one, C24H18O3
  38. Crystal structure of bis(μ2-2-(1,5-dimethyl–3-oxo-2-phenyl-2,3-dihydro-1H-pyrazol-4-yl)imino)methyl)phenolato-κ4O:O,N,O′)-(nitrato-κ2O,O′)dicobalt(II), C36H32Co2N8O4
  39. Synthesis and crystal structure of (3E,5S,10S,13S,14S,17Z)-17-ethylidene-10,13-dimethylhexadecahydro-3H-cyclopenta[α] phenanthren-3-one O-(4-fluorobenzoyl) oxime, C28H36FNO2
  40. The crystal structure of 4-aminiumbiphenyl benzenesulfonate, C18H17NO3S
  41. Synthesis and crystal structure of 1-(7-hydroxy-3-(4-hydroxy-3-nitrophenyl)-4-oxo-4H-chromen-8-yl)-N,N-dimethylmethanaminiumnitrate, C18H17N3O9
  42. Crystal structure of N-(Ar)-N′-(Ar′)-formamidine, C14H12Br2N2O
  43. The crystal structure of 4-(2,4-dichlorophenyl)-2-(4-fluorophenyl)-5-methyl-1H-imidazole, C16H11Cl2FN2
  44. Crystal structure of 1-(4–chlorophenyl)-4-benzoyl-3-methyl-1H-pyrazol-5-ol, C17H13ClN2O2
  45. The crystal structure of 5-amino-1-methyl-4-nitroimidazole, C4H6O2N4
  46. Crystal structure of 1,3-diisopropyl-4,5-dimethylimidazol-2-ylidene-N,N′-bis(1,3-bis(2,6-diisopropylphenyl)-1,3-dihydro-2H-1,3,2-diazaborol-2-yl)-l2-germenediamine, C63H94B2GeN8
  47. The crystal structure of (bromido, chlorido)-tricarbonyl-(5,5′-dimethyl-2,2′-bipyridine)-rhenium(I), C15H12Br0.2Cl0.8N2O3Re1
  48. Crystal structure of [N(E),N′(E)]-N,N′-(1,4-phenylenedimethylidyne)bis-3,5-bis(propan-2-yl)-1H-pyrazol-4-amine, C26H36N6
  49. The crystal structure of poly[2-(4-carboxypyridin-3-yl)terephthalpoly[diaqua-(μ4-2-(6-carboxylatopyridin-3-yl)terephthalato-κ5O,N:O′:O″,O‴)]) cadmium(II)] dihydrate, C28H20Cd3N2O16
  50. Crystal structure of [tetraaqua-bis((3-carboxy-5-(pyridin-4-yl)benzoate-κ1N)cobalt(II)] tetrahydrate, C26H32CoN2O16
  51. Crystal structure of bis(μ2-azido-κ2N:N)-tetrakis(azido-κ1N)-tetrakis(1,10-phenanthroline-κ2N,N′)dibismuth(III), C48H32N26Bi2
  52. Crystal structure of (Z)-N-(4-(4-(4-((4,5,6-trimethoxy-3-oxobenzofuran-2(3H)-ylidene)methyl)phenoxy)butoxy)phenyl)acetamide, C30H31NO8
  53. Crystal structure of poly[diaqua-(μ2-1,3-di(1H-imidazol-1-yl)propane-κ2N:N′)-bis(μ2-5-carboxybenzene-1,3-dicarboxylato-O,O′:O″)-aqua-di-zinc dihydrate solvate], C27H28N4O16Zn2
  54. Crystal structure of 2-(3,5,5-trimethylcyclohex-2-en-1-ylidene)malononitrile, C12H14N2
  55. Crystal structure of chlorido-(5-nitro-2-phenylpyridine-κ2N,C)-[(methylsulfinyl)methane-κ1S]platinum(II), C13H13ClN2O3PtS
  56. The crystal structure of the co-crystal 1,4-dioxane–4,6-bis(nitroimino)-1,3,5-triazinan-2-one(2/1), C11H19N7O9
  57. Crystal structure of [N(E),N′(E)]-N,N′-(1,4-phenylenedimethylidyne)bis-3,5-dimethyl-1H-pyrazol-4-amine di-methanol solvate, C18H20N6·2(CH3OH)
  58. Crystal structure of catena-poly[bis(μ2-azido-k2N:N′)-(nitrato-K2N:N′)-bis(1,10-phenanthroline-K2N:N′)samarium(III)], C24H16N11O3Sm
  59. Crystal structure of (Z)-2-(4-((5-bromopentyl)oxy)benzylidene)-4,5,6-trimethoxybenzofuran-3(2H)-one, C23H25BrO6
  60. Crystal structure of bis(3,5-dimethyl-1H-pyrazol-4-ammonium) tetrafluoroterephthate, 2[C5H10N3][C8F4O4]
  61. Crystal structure of 2-amino-4-(2-fluoro-4-(trifluoromethyl)phenyl)-9-methoxy-1,4,5,6-tetrahydrobenzo[h]quinazolin-3-ium chloride, C20H18ClF4N3O
  62. Crystal structure of 6-(pyridin-3-yl)-1,3,5-triazine-2,4-diamine-sebacic acid (2/1), C13H17N6O2
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