Home The crystal structure of tris(2,3,4,6,7,8,9,10-octahydro-1H-pyrimido[1,2-a]azepin-5-ium) trihydrodecavanadate(V), C27H54N6O28V10
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The crystal structure of tris(2,3,4,6,7,8,9,10-octahydro-1H-pyrimido[1,2-a]azepin-5-ium) trihydrodecavanadate(V), C27H54N6O28V10

  • Yueyang Huo , Qingpeng He ORCID logo EMAIL logo and Yong Wang
Published/Copyright: December 21, 2020

Abstract

C27H54N6O28V10, triclinic, P1 (no. 2), a = 11.3803(3) Å, b = 14.0832(4) Å, c = 16.2352(7) Å, α = 91.784(3) Å, β = 104.264(3) Å, γ = 107.112(2) Å, V = 2395.04(14) Å3, Z = 2, Rgt (F) = 0.0291, wRref (F2) = 0.0810, T = 293(2) K.

CCDC no.: 2048034

The asymmetric unit of the title crystal structure is shown in the figure. Table 1 contains crystallographic data and Table 2 contains the list of the atoms including atomic coordinates and displacement parameters.

Table 1:

Data collection and handling.

Crystal:Orange block
Size:0.30 × 0.26 × 0.23 mm
Wavelength:Mo Kα radiation (0.71073 Å)
μ:1.95 mm−1
Diffractometer, scan mode:D8, φ and ω
θmax, completeness:25.0°, >99%
N(hkl)measured, N(hkl)unique, Rint:19494, 8468, 0.021
Criterion for Iobs, N(hkl)gt:Iobs > 2 σ(Iobs), 6898
N(param)refined:641
Programs:Bruker [1], SHELX [2]
Table 2:

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2).

AtomxyzUiso*/Ueq
V10.19317 (4)0.73835 (3)0.93744 (3)0.01919 (11)
V20.17734 (4)0.95560 (3)0.92230 (3)0.02003 (11)
V30.10097 (4)1.02294 (3)0.74243 (3)0.02194 (11)
V40.38385 (4)1.10791 (3)0.83842 (3)0.02159 (11)
V50.30449 (4)0.95834 (3)0.67754 (3)0.01934 (11)
V60.32366 (4)0.74662 (3)0.69509 (3)0.02024 (11)
V70.41903 (4)0.68271 (3)0.87273 (3)0.02226 (12)
V80.13640 (4)0.59398 (3)0.77324 (3)0.02250 (12)
V90.11018 (3)0.80615 (3)0.75800 (3)0.01663 (11)
V100.41043 (4)0.89898 (3)0.85916 (3)0.01743 (11)
O10.09629 (14)0.81682 (12)0.87495 (11)0.0185 (4)
O20.36767 (17)0.74912 (14)0.60925 (12)0.0287 (4)
O30.42176 (14)0.88946 (12)0.74913 (10)0.0177 (4)
O40.10128 (15)0.62357 (13)0.88124 (11)0.0229 (4)
O50.44413 (15)0.70338 (13)0.76890 (12)0.0238 (4)
O60.26772 (14)0.76291 (12)0.82108 (10)0.0178 (4)
O70.19921 (15)0.62806 (13)0.68026 (11)0.0233 (4)
O80.28003 (16)0.57074 (13)0.83226 (12)0.0251 (4)
O90.19436 (14)0.81856 (12)0.66772 (10)0.0185 (4)
O100.02708 (15)0.68427 (13)0.73186 (11)0.0221 (4)
O110.32235 (14)0.88640 (12)0.95837 (11)0.0185 (4)
H110.37180.90501.00850.022*
O120.49443 (14)1.02164 (13)0.89216 (11)0.0212 (4)
O130.01184 (15)0.87262 (13)0.71859 (11)0.0223 (4)
O140.16822 (15)1.00189 (13)0.65300 (11)0.0226 (4)
O150.34592 (15)0.69718 (13)0.97054 (11)0.0223 (4)
H150.40190.74061.00920.027*
O160.23501 (15)1.13302 (13)0.78882 (11)0.0233 (4)
O170.50843 (14)0.83351 (12)0.90655 (11)0.0204 (4)
O180.25426 (14)0.94585 (12)0.80853 (10)0.0176 (4)
O190.34503 (16)0.96079 (14)0.59023 (12)0.0279 (4)
O200.15663 (17)0.73762 (14)1.02614 (12)0.0299 (4)
O210.48589 (17)1.21555 (14)0.87576 (12)0.0311 (4)
O220.06886 (15)0.99988 (13)0.85355 (11)0.0238 (4)
O230.31609 (15)1.07955 (13)0.94142 (11)0.0232 (4)
H230.37631.07640.98320.028*
O240.53030 (17)0.64074 (15)0.92003 (13)0.0333 (5)
O250.14492 (17)0.95660 (15)1.01285 (12)0.0304 (4)
O26−0.01078 (17)1.06570 (15)0.69683 (13)0.0340 (5)
O270.03670 (17)0.48558 (14)0.74122 (13)0.0359 (5)
O280.41317 (15)1.07918 (13)0.73903 (11)0.0218 (4)
C10.7152 (4)0.5701 (3)0.3744 (2)0.0567 (10)
H1A0.77250.53700.36030.068*
H1B0.65630.57490.32140.068*
C20.6416 (4)0.5082 (3)0.4292 (3)0.0716 (13)
H2A0.57400.45280.39320.086*
H2B0.60200.54870.45550.086*
C30.7238 (5)0.4665 (3)0.5002 (3)0.0815 (14)
H3A0.67040.43260.53530.098*
H3B0.74970.41650.47310.098*
C40.8398 (4)0.5391 (3)0.5574 (3)0.0639 (11)
H4A0.88320.50300.59770.077*
H4B0.81390.58450.58990.077*
C50.9345 (3)0.6008 (3)0.5117 (3)0.0580 (10)
H5A1.01890.62490.55120.070*
H5B0.93840.55900.46450.070*
C60.8952 (3)0.6868 (2)0.4791 (2)0.0386 (7)
C70.9224 (4)0.8642 (3)0.4967 (2)0.0693 (13)
H7A0.95720.89540.45180.083*
H7B0.95310.91260.54710.083*
C80.7808 (4)0.8317 (3)0.4685 (3)0.0621 (11)
H8A0.75180.88830.45170.075*
H8B0.74650.80640.51540.075*
C90.7342 (3)0.7522 (3)0.3951 (2)0.0494 (9)
H9A0.64190.72560.38110.059*
H9B0.75760.78040.34550.059*
C210.3238 (4)0.5084 (3)0.2395 (3)0.0644 (11)
H21A0.40300.54120.28270.077*
H21B0.25470.51800.26030.077*
C200.3067 (3)0.3977 (3)0.2285 (2)0.0465 (8)
H20A0.37740.38810.20970.056*
H20B0.30960.37220.28350.056*
C190.1831 (3)0.3379 (2)0.16505 (19)0.0326 (7)
H19A0.16180.26910.17810.039*
H19B0.11590.36360.17290.039*
C240.1993 (3)0.4213 (2)0.0382 (2)0.0412 (8)
C230.2048 (4)0.5149 (3)0.0857 (3)0.0632 (11)
H23A0.13200.50170.10930.076*
H23B0.19830.56430.04590.076*
C220.3265 (4)0.5581 (3)0.1579 (3)0.0786 (14)
H22A0.39810.55140.13870.094*
H22B0.34030.62900.17070.094*
C250.2077 (4)0.3376 (3)−0.0931 (2)0.0646 (11)
H25A0.29310.3329−0.08460.078*
H25B0.17440.3438−0.15300.078*
C260.1241 (3)0.2468 (3)−0.0681 (2)0.0526 (9)
H26A0.12760.1875−0.09820.063*
H26B0.03650.2477−0.08390.063*
C270.1669 (3)0.2434 (2)0.0268 (2)0.0376 (7)
H27A0.10390.19060.04380.045*
H27B0.24680.22810.04070.045*
C170.2833 (3)1.1163 (2)0.3174 (2)0.0472 (9)
H17A0.31871.18760.33530.057*
H17B0.19841.09400.32600.057*
C160.2735 (3)1.0975 (3)0.2241 (2)0.0494 (9)
H16A0.20261.11640.19030.059*
H16B0.35101.13810.21180.059*
C180.3647 (3)1.0638 (2)0.3721 (2)0.0366 (7)
H18A0.45371.09940.37740.044*
H18B0.35161.06480.42890.044*
C150.2850 (3)0.9310 (2)0.25513 (19)0.0327 (7)
C140.2582 (3)0.8257 (2)0.2209 (2)0.0480 (9)
H14A0.33620.80790.23770.058*
H14B0.23240.82020.15890.058*
C130.1549 (3)0.7515 (3)0.2514 (2)0.0509 (9)
H13A0.08650.77970.25030.061*
H13B0.12010.69100.21160.061*
C120.2004 (4)0.7240 (3)0.3404 (2)0.0615 (11)
H12A0.12950.67520.35390.074*
H12B0.26560.69250.34070.074*
C110.2539 (3)0.8115 (2)0.4098 (2)0.0491 (9)
H11A0.27730.78690.46470.059*
H11B0.18790.84170.41110.059*
C100.3698 (3)0.8911 (2)0.39777 (19)0.0375 (7)
H10A0.41890.92900.45270.045*
H10B0.42330.85880.37740.045*
N10.7899 (2)0.67144 (19)0.41649 (16)0.0373 (6)
N20.9630 (3)0.7766 (2)0.51602 (18)0.0546 (8)
H21.03440.78430.55330.065*
N30.3363 (2)0.96030 (17)0.33712 (15)0.0278 (5)
N40.2546 (2)0.9933 (2)0.20121 (17)0.0429 (7)
H40.22080.97010.14830.051*
N50.1842 (2)0.33866 (17)0.07441 (15)0.0287 (5)
N60.2112 (3)0.4236 (2)−0.0407 (2)0.0624 (9)
H60.22160.4796−0.06220.075*

Source of material

Vanadium pentoxide (0.453 g; 2.5 mmol), 1,8-diazabicyclo[5.4.0]undec-7-ene (1.522 g; 10 mmol) were dissovled in 30 mL deionized water. The mixture was stirred for 12 h at room temperature, the resulting solution was stirred at 80 °C for 4 h and then filtered. the filtrate was set to standby at ambient temperature for five days, orange crystals of the title compound suited for X-ray diffraction were obtained.

Yield: 35%, and elemental analysis: calc. for C27H54N6O28V10: C 22.84, H 3.83, N 5.92; found: C 22.95, H 3.71, N 6.03. The elemental analyses were performed with PERKIN ELMER MODEL 2400 SERIES II.

Experimental details

All hydrogen atomic positions were taken from a difference Fourier map. Hydrogen atoms were assigned with common isotropic displacement factors Uiso (H) = 1.2 times Ueq (C, O, N). All the H atoms were refined as riding on their parent atom.

Comment

Polyoxovanadates (POVs), are a class of vanadium-oxide clusters with reversible multi-electron redox transformations under mild conditions, which allow them to act as multi-functional catalysts in homogeneous or heterogeneous catalytic systems [3], [4], [5], [6]. The functionalization of the POVs cluster can endow them more properties and thus exploration of new functionalized POVs structure is an interesting aspect in recent POVs chemistry [7], [8]. Therefore, a lot of studies on functionalized POVs structure, including organic-inorganic hybrid POVs, organic functionalized POVs, etc. have been widely reported [9]. In addition, as a class of versatile N-ligands, 1,8-diazabicyclo[5.4.0]undec-7-ene (DBU) can be used not only as a base but also as solvent in the synthesis of metal complexes. However, the examples of DBU-based polyoxovanadates are still rare.

The molecular structure of title DBU-based decavanadate is displayed in the figure. Single crystal diffraction analysis shows that the title compound consists of three mono-protonated DBu molecules and a threefold-protonated decavanadate cluster. Accordingly, the title compound is formulated as (HDBU)3H3V10O28. The protonated HDBU balanced the negative charge of the threefold-protonated decavanadate polyanions. Each DBU ligand has one protonated hydrogen atom on the nitrogen atom, the C–N bond distances of DBU ligand are in the range of 1.306(4) and 1.472(4) Å, which is similar with those of a reported compound [10].

Additionly, the 3D supramolecular structure of the DBU-based decavanadate is stabilized by intermolecular strong C–H⋯O, N–H⋯O and O–H⋯O hydrogen-bonding interactions with the distances 2.733–2.763 Å (O–O), 2.969–3.044 Å (N–O) and 3.126–3.502 Å (C–O) between H3V10O283 and three HDBU+ cations.


Corresponding author: Qingpeng He, Shandong Provincial Key Laboratory of Chemical Energy Storage and Novel Cell Technology, School of Chemistry & Chemical Engineering, Liaocheng University, Liaocheng, 252000, Shandong, China, E-mail:

Funding source: Liaocheng University

Award Identifier / Grant number: 263222017215; 263222017214

  1. Author contribution: All the authors have accepted responsibility for the entire content of this submitted manuscript and approved submission.

  2. Research funding: Research on Experimental Technology of Liaocheng University (263222017215; 263222017214).

  3. Conflict of interest statement: The authors declare no conflicts of interest regarding this article.

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Received: 2020-11-05
Accepted: 2020-12-04
Published Online: 2020-12-21
Published in Print: 2021-03-26

© 2020 Yueyang Huo et al., published by De Gruyter, Berlin/Boston

This work is licensed under the Creative Commons Attribution 4.0 International License.

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  51. The crystal structure of diphenyalmine hydrochloride antimony trichloride co-crystallizate, C12H12Cl4NSb – Localization of hydrogen atoms
  52. The crystal structure of para-nitrobenzylbromide, C7H6BrNO2 – A second polymorph and correction of 3D coordinates
  53. Crystal structure of catena-poly[(5H-pyrrolo[3,2-b:4,5-b′]dipyridine-κ2N,N′)-(μ4-hexaoxidodivanadato)dizinc(II)],C10H9N3O6V2Zn
  54. Crystal structure of N,N′-(2-hydroxypropane-1,3-diyl)bis(pyridine-2-aldimine)-κ5N,N′,N′′,N′′′,O]-tris(nitrato-κ2O,O′) cerium(III), C15H16CeN7O10
  55. Synthesis and crystal structure of oktakis(dimethylsulphoxide-κ1O)gadolinium(III) [tetrabromido-μ2-bromido-μ2-sulfido-di-μ3-sulfido-μ4-sulfido-tetracopper(I)-tungsten(VI)], C16H48O8S12Br5Cu4GdW
  56. Crystal structure of {tris((1H-benzo[d]imidazol-2- yl)methyl)amine-κ4N,N′,N′′,N′′′}-(succinato-κ2O,O′)nickel(II) – methanol (1/4), C32H41N7NiO8
  57. Crystal structure of catena-poly[trans-tetraaqua(μ2-1,1′-(biphenyl-4,4′-diyl)bis(1H-imidazol)-k2N:N′)cobalt(II)] dinitrate – 1,1′-(biphenyl-4,4′-diyl)bis(1H-imidazol) – water (1/3/2), C72H68CoN18O12
  58. Crystal structure of bis(μ2-2-oxido-2-phenylacetate-κ3O:O,O′)-bis(1-isopropoxy-2-oxo-2-phenylethan-1-olato-κ2O,O′)-bis(propan-2-olato-κ1O)dititanium(IV), C44H52O14Ti2
  59. The crystal structure of 5-carboxy-2-(hydroxymethyl)-1H-imidazol-3-ium-4-carboxylate, C6H8N2O6
  60. The crystal structure of 2,6-dibromo-4-fluoroaniline, C6H4Br2FN
  61. The crystal structure of 4-chloro-N-(2-phenoxyphenyl)benzamide, C19H14ClNO2
  62. The crystal structure of 2-methyl-β-naphthothiazole, C12H9NS
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