Home Crystal structure of 2-(4-(dimethylamino)-2-fluorophenyl)-1,3-bis(1H-1,2,4-triazol-1-yl)propan-2-ol monohydrate, C15H20FN7O2
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Crystal structure of 2-(4-(dimethylamino)-2-fluorophenyl)-1,3-bis(1H-1,2,4-triazol-1-yl)propan-2-ol monohydrate, C15H20FN7O2

  • Shao-Hua Liu EMAIL logo , Mi Tang , Li-Hua Cheng and Shi-Gang Shen
Published/Copyright: April 7, 2017

Abstract

C15H20FN7O2, triclinic, P1̅ (no. 2), a = 5.8088(18) Å, b = 11.667(4) Å, c = 13.104(4) Å, α = 68.724(4)°, β = 84.660(5)°, γ = 84.859(4)°, V = 822.4(4) Å3, Z = 2, Rgt(F) = 0.0501, wRref(F2) = 0.1394, T = 293(2) K.

CCDC no.:: 1540999

The asymmetric unit of the title crystal structure is shown in the figure. Tables 1 and 2 contain details of the measurement method and a list of the atoms including atomic coordinates and displacement parameters.

Table 1

Data collection and handling.

Crystal:Colourless block
Size:0.28 × 0.22 × 0.18 mm
Wavelength:Mo Kα radiation (0.71073 Å)
μ:1.1 cm−1
Diffractometer, scan mode:Bruker APEX-II, φ and ω
2θmax, completeness:50°, 98.4%
N(hkl)measured, N(hkl)unique, Rint:4390, 2838, 0.024
Criterion for Iobs, N(hkl)gt:Iobs > 2 σ(Iobs), 1857
N(param)refined:229
Programs:DIAMOND [1], SHELX [2], Bruker programs [3]
Table 2

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2).

AtomxyzUiso*/Ueq
F10.0295(2)0.37080(12)0.55389(11)0.0549(4)
O10.5429(3)0.31464(15)0.77918(13)0.0481(4)
H10.51160.31830.84030.072*
N10.2555(3)0.53275(16)0.76014(15)0.0454(5)
N20.0400(4)0.56043(19)0.79813(18)0.0586(6)
N30.3129(4)0.60236(19)0.88777(17)0.0607(6)
N40.1645(3)0.14260(16)0.83728(14)0.0405(5)
N5−0.0201(4)0.07588(19)0.84265(17)0.0533(6)
N60.2914(4)−0.04937(18)0.90646(16)0.0525(6)
N70.5224(4)0.1484(2)0.37448(18)0.0665(7)
C10.3884(4)0.29169(19)0.62792(17)0.0386(5)
C20.2352(4)0.3080(2)0.54847(18)0.0413(5)
C30.2731(4)0.2644(2)0.46452(18)0.0475(6)
H30.16180.27930.41390.057*
C40.4802(4)0.1974(2)0.45503(18)0.0473(6)
C50.6400(4)0.1815(2)0.5327(2)0.0500(6)
H50.78170.13920.52790.060*
C60.5937(4)0.2264(2)0.61587(18)0.0455(6)
H60.70480.21240.66650.055*
C70.3383(4)0.3394(2)0.72168(17)0.0386(5)
C80.2878(4)0.4789(2)0.67541(19)0.0462(6)
H8A0.41530.51650.62440.055*
H8B0.14920.49730.63500.055*
C90.4139(5)0.5588(2)0.8145(2)0.0535(7)
H90.57330.54770.80220.064*
C100.0879(5)0.6018(2)0.8747(2)0.0625(8)
H10−0.02720.62860.91660.075*
C110.1355(4)0.27625(19)0.79894(18)0.0408(6)
H11A0.11980.30230.86180.049*
H11B−0.00630.30270.76090.049*
C120.3457(4)0.0662(2)0.87588(19)0.0463(6)
H120.49100.09080.88070.056*
C130.0679(5)−0.0370(2)0.8848(2)0.0568(7)
H13−0.0195−0.10470.89890.068*
C140.7389(5)0.0819(3)0.3639(3)0.0767(9)
H14A0.85870.13880.33420.115*
H14B0.72480.03790.31560.115*
H14C0.77770.02450.43470.115*
C150.3518(5)0.1536(3)0.3005(2)0.0691(8)
H15A0.22590.10480.34060.104*
H15B0.42030.12200.24580.104*
H15C0.29500.23750.26570.104*
O20.5413(3)0.72228(15)1.00420(13)0.0637(6)
H2A0.49740.66800.98600.096*
H2B0.48170.79260.98170.096*

Source of material

Fluconazole (C13H12F2N6O, 20 mg) was dissolved in a water and DMF (v:v = 4:1, 5 mL) solution. Then the solution was transferred to a Teflon-lined stainless vessel and heated to 313 K for 72 h. It was then cooled to room temperature at a rate of 1 K/h to afford colorless block crystals of the title compound in ca. 30% yield.

Experimental details

H atoms bonded to aromatic and methylene C atoms were positioned geometrically (C—H = 0.93 and 0.97 Å, respectively) and included in the refinement as the riding-model, with Uiso(H) = 1.2Ueq(C). Hydroxyl and water H atoms were refined as rigid groups with O—H = 0.82 Å that were allowed to rotate but not tip, with Uiso(H) = 1.5Ueq(O).

Comment

Fluconazole (C13H12F2N6O), 2-(2,4-difluorophenyl)-1,3-bis(1,2,4-triazol-1-yl)-propan-2-ol, a good antifungal agent, has been effectively applied in clinical treatment and also plays a great role in preventing the opportunistic fungal infections for HIV patients [4, 5] . In order to enhance fluconazole’s biomedical application, numberous research groups have been engaged in new polymorphs of fluconazole, which resulted in the formation of several polymorphs, salts, solvates and cocrystals [6, 7] . In this context, we initial the solvothermal treatment of fluconazole in water and DMF solution. An unexpectant crystalline product resulting from the SNAr reaction of the aryl fluoride, namely 2-(4-(dimethylamino)-2-fluorophenyl)-1,3-bis(1H-1,2,4-triazol-1-yl)propan-2-ol monohydrate (C15H20FN7O2), was obtained and characterized by X-ray single-crystal diffraction.

In the asymmetric unit, there is one 2-(4-(dimethyl-amino)-2-fluorophenyl)-1,3-bis(1H-1,2,4-triazol-1-yl)propan-2-ol and a water molecule. The torison angles of C2–C1–C7–O1, C7–C8–N1–N2 and C7–C11–N4–N5 are −174.8(2), −99.3(2), and −138.2(2), respectively. The dihedral angles between the aryl ring and the triazole rings are 26.0(1) and 68.5(1)°, respectively. Two terminal pyridyl rings make a dihedral angle of 68.0(1)° with each other. In contrast to the polymorphs of fluconazole [7], the title compound has not been found to form a dimer. The resultant hydrogen-bonding array is an infinite waving tape built by the O–H⋅⋅⋅O and O–H⋅⋅⋅N interactions between the host substituted fluconazole and the water molecule. Weak π⋅⋅⋅π interactions have to be taken into account, to construct the final 3D supramolecular arrangement.

References

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2 Sheldrick, G. M.: A short history of SHELX. Acta Crystallogr. A64 (2008) 112–122.10.1107/S0108767307043930Search in Google Scholar PubMed

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Received: 2016-11-5
Accepted: 2017-3-29
Published Online: 2017-4-7
Published in Print: 2017-5-24

©2017 Shao-Hua Liu et al., published by De Gruyter, Berlin/Boston

This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 3.0 License.

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