Home Crystal structure of (16S)-12,16-epoxy-11,14-dihydroxy-17(15/16)-abeo-3a,18-cyclo-8,11,13-abietatrien-7-one, C20H24O4
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Crystal structure of (16S)-12,16-epoxy-11,14-dihydroxy-17(15/16)-abeo-3a,18-cyclo-8,11,13-abietatrien-7-one, C20H24O4

  • Muhammad Yousaf , Mohammad Nur-e-Alam , Hazem A. Ghabbour EMAIL logo , Mai Al-Oqai and Adnan J. Al-Rehaily
Published/Copyright: April 19, 2017

Abstract

C20H24O4, orthorhombic, P212121, a = 8.3007(4) Å, b = 12.0111(6) Å, c = 17.0604(9) Å, V = 1700.93(15) Å3, Z = 4, Rgt(F) = 0.0621, wRref(F2) = 0.1413, T = 296(2) K.

CCDC no.:: 1507734

The asymmetric unit of the title crystal structure is shown in the figure. Tables 1 and 2 contain details on crystal structure and measurement conditions and a list of the atoms including atomic coordinates and displacement parameters.

Table 1

Data collection and handling.

Crystal:Yellow block
Size:0.20 × 0.15 × 0.05 mm
Wavelength:Cu Kα radiation (1.54178 Å)
μ:7.1 cm−1
Diffractometer, scan mode:Bruker APEX-II, φ and ω
2θmax, completeness:125°, >99%
N(hkl)measured, N(hkl)unique, Rint:5450, 2673, 0.088
Criterion for Iobs, N(hkl)gt:Iobs > 2 σ(Iobs), 1714
N(param)refined:228
Programs:Bruker programs [1], SHELX [2]
Table 2

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2).

AtomxyzUiso*/Ueq
O10.0720(3)0.6094(3)0.6165(2)0.0258(8)
O20.6243(3)0.6371(3)0.5820(2)0.0310(10)
O30.7927(4)0.4691(3)0.6141(2)0.0363(10)
O40.0833(4)0.3832(3)0.6517(2)0.0315(10)
C1−0.0012(5)0.8047(4)0.6243(3)0.0337(14)
H1A−0.11390.78050.62310.050*
H1B0.00860.87740.59870.050*
H1C0.03480.81070.67890.050*
C20.1020(5)0.7206(4)0.5817(3)0.0266(13)
H2A0.07120.71930.52500.032*
C30.2857(5)0.7375(4)0.5888(3)0.0286(13)
H3A0.33040.77490.54190.034*
H3B0.31390.78090.63620.034*
C40.3433(5)0.6189(4)0.5949(3)0.0264(12)
C50.4951(5)0.5701(4)0.5963(3)0.0247(12)
C60.5092(5)0.4551(4)0.6119(3)0.0252(12)
C70.6703(5)0.4107(4)0.6231(3)0.0270(12)
C80.6893(5)0.2923(4)0.6486(3)0.0285(13)
H8A0.68550.28820.70650.034*
H8B0.79540.26390.63120.034*
C90.5570(5)0.2204(4)0.6144(3)0.0239(12)
H9A0.56070.23120.55630.029*
C100.5810(6)0.0950(4)0.6292(3)0.0294(13)
C110.4338(6)0.0210(4)0.6254(3)0.0387(15)
H11A0.4373−0.04500.66110.046*
C120.2677(6)0.0697(4)0.6136(4)0.0397(15)
H12A0.20550.06080.66270.048*
H12B0.21190.02670.57220.048*
C130.2671(5)0.1934(4)0.5905(3)0.0276(13)
H13A0.15700.22380.59680.033*
H13B0.29790.20070.53460.033*
C140.3868(5)0.2614(4)0.6421(3)0.0256(12)
C150.3708(5)0.3869(4)0.6260(3)0.0247(12)
C160.2209(5)0.4390(4)0.6294(3)0.0234(12)
C170.2128(5)0.5527(4)0.6130(3)0.0260(12)
C180.5533(6)0.0183(4)0.5608(3)0.0386(15)
H18A0.52210.05230.51020.046*
H18B0.6229−0.04830.55640.046*
C190.7102(6)0.0612(4)0.6869(3)0.0377(14)
H19A0.7080−0.01980.69390.057*
H19B0.69060.09770.73730.057*
H19C0.81590.08360.66670.057*
C200.3606(5)0.2412(4)0.7297(3)0.0311(13)
H20A0.25030.26220.74380.047*
H20B0.43700.28630.75980.047*
H20C0.37760.16230.74150.047*
H1O20.707(7)0.593(4)0.588(4)0.06(2)*
H1O40.006(7)0.415(5)0.629(4)0.07(2)*

Source of material

Teucrium yemense (Defl) was collected in February, 2014 from Akabat Al-Abna, Baljurashi, Saudi Arabia and identified by M. Yusuf, taxonomist, College of Pharmacy, King Saud University (KSU), Riyadh, Saudi Arabia. A voucher specimen (# 15292) was deposited at the herbarium of the college of Pharmacy, KSU. The repeated column chromatography of ethyl acetate extract on silica gel the title compound was precipitate when column was running 20% acetone in hexane, which has been recrystallized in the mixture of solvent, methanol and dichloromethane. This compound was previously isolated by Carreiras et al. [3].

Experimental details

H atoms were placed in calculated positions and were included in the refinement in the riding model approximation, with Uiso(H) = 1.2Ueq(C). The H atoms of the methyl group were allowed to rotate with a fixed angle around the C—C bond to best fit the experimental electron density (AFIX 137 in the SHELX program suite [2]), with Uiso(H) = 1.5 Ueq(C).

Discussion

Reehal Fatima, (Teucrium yemense) (Defl) is a Saudi Arabian Medicinal plant is used as anti-diabetic and for kidney problems [4]. It has been found that the extract of this plant has anti-diabetic effects. From the previous phytochemical studies, the plant is a source of diterpenes [5], iridoids [6], and others [7]. Teucrium is a polymorphic and cosmopolitan genus of perennial plants, common in mediterranean climates and Middle-East [8]. The local population is using Teucrium for treatment of remedy of several diseases [9]. In our bio-assay guided phytochemical study of nonpolar part of ethyl acetate extracts we isolated the title compound, Teuvincenones D [3].

The asymmetric unit of the title compound contains one independent molecule. The molecule has one intramolecular hydrogen bond between O2—H1O2⋯O3. The molecules are packed in the crystal structure via one classical and at least one non-classical intermolecular hydrogen bond: O4—H1O4⋯O3i and C2—H2A⋯O2ii. The H⋯A distances are 1.90(6) and 2.55 Å, respectively and the angles are 158(6)° and 130°, respectively. Symmetry codes: (i) x−1, y, z; (ii) x−1/2, − y + 3/2, − z + 1.

Acknowledgement

The authors would like to extend their sincere appreciation to the Deanship of Scientific Research at King Saud University for funding this work through the Research Group Project No. RG-1438-043.

References

1 Bruker. APEX2, SAINT and SADABS. Brucker AXS Inc., Madison, Wisconsin, USA, (2009).Search in Google Scholar

2 Sheldrick, G. M.: A short history of SHELX. Acta Crystallogr. A64 (2008) 112–122.10.1107/S0108767307043930Search in Google Scholar

3 Carreiras, M. C.; Rodriguez, B.; Torre, M. C. de la.; Perales, A.; Torres, M. R.; Savona, G.; Piozzi, F.: Rearranged abietane diterpenoids from the root of Teucrium polium subsp. Vincentinum. Tetrahedron 46 (1990) 847–860.10.1016/S0040-4020(01)81367-3Search in Google Scholar

4 Rahman, M. A.; Mossa, J. S.; Al-Said, M. S.; Al-Yahya, M. A.: Medicinal plant diversity in the flora of Saudi Arabia 1: a report on seven plant families. Fitoterapia 75 (2004) 149–161.10.1016/j.fitote.2003.12.012Search in Google Scholar

5 Sattar, E. A.; Mossa, J. S.; Muhammad, I.; El-Feraly, F. S.: Neo-clerodane diterpenoids from Teucrium yemense. Phytochemistry 40 (1995) 1737–1741.10.1016/0031-9422(95)00302-NSearch in Google Scholar

6 Sattar, E. A.: Iridoids from Teucrium yemense. Arch. Pharm. Res. 21 (1998) 785–786.10.1007/BF02976778Search in Google Scholar PubMed

7 Sattar, E. A.: T-cadinol and poliumoside from Teucrium yemense. Saudi Pharm. J. 3 (1995) 188–191.Search in Google Scholar

8 Moghtader, M.: Chemical composition of the essential oil of Teucrium polium L. from Iran. AEJSR 5 (2009) 843–846.Search in Google Scholar

9 Guetat, A.; Al-Ghamdi, F. A.: Analysis of the essential oil of the germander (Teucrium polium L.) aerial parts from the northern region of Saudi Arabia. IJABPT 5 (2014) 128–135.Search in Google Scholar

Received: 2016-10-24
Accepted: 2017-3-20
Published Online: 2017-4-19
Published in Print: 2017-5-24

©2017 Muhammad Yousaf et al., published by De Gruyter, Berlin/Boston

This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 3.0 License.

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