Abstract
C12H9ClFN3, monoclinic, P21/n (no. 14), a = 10.120(4) Å, b = 13.823(6) Å, c = 16.480(7) Å, β = 91.744(8)°, V = 2304.4(17) Å3, Z = 8, R gt (F) = 0.0402, wR ref (F 2) = 0.0932, T = 113.15 K.
Only one of the two crystallographically independent moleules of the title structure is shown in the figure. Table 1 contains crystallographic data and Table 2 contains the list of the atoms including atomic coordinates and displacement parameters.

Data collection and handling.
Crystal: | Colorless prism |
Size: | 0.20 × 0.20 × 0.20 mm |
Wavelength: | Mo Kα radiation (0.71073 Å) |
μ: | 0.32 mm−1 |
Diffractometer, scan mode: | ω |
θ max, completeness: | 27.8°, >99% |
N(hkl)measured, N(hkl)unique, R int: | 22,536, 5483, 0.044 |
Criterion for I obs, N(hkl)gt: | I obs > 2 σ(I obs), 4604 |
N(param)refined: | 307 |
Programs: | Olex2 [1], SHELX [2, 3] |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2).
Atom | x | y | z | U iso*/U eq |
---|---|---|---|---|
Cl1 | −0.38845 (4) | −0.19073 (3) | 0.08628 (3) | 0.03236 (12) |
F1 | 0.20724 (9) | 0.40525 (6) | 0.24092 (6) | 0.0338 (2) |
N1 | −0.22853 (13) | 0.08362 (8) | 0.17193 (8) | 0.0222 (3) |
N2 | −0.29329 (13) | −0.00277 (8) | 0.15728 (8) | 0.0245 (3) |
H2 | −0.2525 | −0.0582 | 0.1662 | 0.029* |
N3 | −0.49118 (13) | 0.08102 (8) | 0.13412 (8) | 0.0233 (3) |
C1 | 0.12947 (15) | 0.32514 (10) | 0.23167 (10) | 0.0234 (3) |
C2 | −0.00248 (16) | 0.33696 (11) | 0.21119 (11) | 0.0279 (4) |
H2A | −0.0389 | 0.3998 | 0.2036 | 0.033* |
C3 | −0.08082 (15) | 0.25556 (10) | 0.20191 (10) | 0.0261 (4) |
H3 | −0.1722 | 0.2627 | 0.1882 | 0.031* |
C4 | −0.02774 (14) | 0.16277 (10) | 0.21239 (9) | 0.0198 (3) |
C5 | 0.10637 (15) | 0.15427 (11) | 0.23368 (10) | 0.0251 (3) |
H5 | 0.1440 | 0.0919 | 0.2415 | 0.030* |
C6 | 0.18574 (15) | 0.23591 (11) | 0.24358 (10) | 0.0281 (4) |
H6 | 0.2769 | 0.2299 | 0.2583 | 0.034* |
C7 | −0.10802 (15) | 0.07601 (10) | 0.19870 (10) | 0.0221 (3) |
H7 | −0.0713 | 0.0139 | 0.2096 | 0.026* |
C8 | −0.42223 (15) | −0.00121 (10) | 0.12863 (9) | 0.0210 (3) |
C9 | −0.48146 (16) | −0.08549 (10) | 0.09531 (10) | 0.0243 (3) |
C10 | −0.61163 (16) | −0.08396 (11) | 0.06917 (10) | 0.0291 (4) |
H10 | −0.6525 | −0.1405 | 0.0474 | 0.035* |
C11 | −0.68249 (16) | 0.00173 (11) | 0.07515 (10) | 0.0303 (4) |
H11 | −0.7727 | 0.0053 | 0.0577 | 0.036* |
C12 | −0.61782 (16) | 0.08122 (11) | 0.10706 (10) | 0.0274 (4) |
H12 | −0.6658 | 0.1401 | 0.1102 | 0.033* |
Cl2 | 0.05702 (4) | 0.58235 (2) | 0.16911 (2) | 0.02695 (11) |
F2 | −0.23767 (11) | 1.13806 (7) | 0.56619 (6) | 0.0448 (3) |
N4 | −0.09219 (12) | 0.83511 (8) | 0.29660 (8) | 0.0208 (3) |
N5 | −0.05299 (12) | 0.75652 (8) | 0.25234 (8) | 0.0219 (3) |
H5A | −0.0418 | 0.6997 | 0.2756 | 0.026* |
N6 | −0.06113 (13) | 0.85439 (8) | 0.13699 (8) | 0.0257 (3) |
C13 | −0.20850 (16) | 1.05980 (11) | 0.51954 (11) | 0.0288 (4) |
C14 | −0.23277 (15) | 1.06506 (11) | 0.43733 (11) | 0.0275 (4) |
H14 | −0.2710 | 1.1216 | 0.4137 | 0.033* |
C15 | −0.20081 (14) | 0.98696 (10) | 0.38954 (10) | 0.0236 (3) |
H15 | −0.2186 | 0.9893 | 0.3326 | 0.028* |
C16 | −0.14204 (14) | 0.90391 (10) | 0.42449 (10) | 0.0212 (3) |
C17 | −0.12203 (15) | 0.90098 (10) | 0.50860 (10) | 0.0248 (3) |
H17 | −0.0854 | 0.8445 | 0.5332 | 0.030* |
C18 | −0.15470 (15) | 0.97917 (11) | 0.55715 (10) | 0.0281 (4) |
H18 | −0.1404 | 0.9771 | 0.6144 | 0.034* |
C19 | −0.09868 (15) | 0.82341 (10) | 0.37355 (10) | 0.0222 (3) |
H19 | −0.0756 | 0.7630 | 0.3975 | 0.027* |
C20 | −0.03169 (14) | 0.76864 (10) | 0.17111 (10) | 0.0205 (3) |
C21 | 0.02210 (14) | 0.69337 (10) | 0.12411 (10) | 0.0219 (3) |
C22 | 0.04700 (16) | 0.70789 (12) | 0.04390 (10) | 0.0307 (4) |
H22 | 0.0824 | 0.6573 | 0.0121 | 0.037* |
C23 | 0.01954 (19) | 0.79819 (12) | 0.00960 (11) | 0.0384 (4) |
H23 | 0.0375 | 0.8116 | −0.0455 | 0.046* |
C24 | −0.03450 (17) | 0.86693 (12) | 0.05883 (11) | 0.0344 (4) |
H24 | −0.0545 | 0.9282 | 0.0354 | 0.041* |
Source of material
According to the our previous work [4], the 3-chloro-2-hydrazinylpyridine (1.43 g, 0.1 mol) and 4-fluoro-benzaldehyde (1.24 g, 0.1 mol) was dissolved in EtOH (50 mL) and stirred at room temperature for 24 h. Then a solid was obtained, which was filtered and dried with 85% yield. The solid was recrystallized from ethanol as colorless block crystals.
Experimental details
Hydrogen atoms were added using riding models. Their U iso values were set to 1.2U eq of the parent atoms. Using Olex2 [1], the structure was solved with the ShelXS [2] structure solution program and refined with the ShelXL [3] refinement package.
Comment
Pyridine is an attractive heterocycle because of the excellent biological activity of some derivatives, such as insecticidal activity [5], fungicidal activity [6], herbicidal activity [7]. On the other hand, the hydrazone group is an active group in many bioactive molecules [8].
The asymmetric unit of the title pyridine compound consists of two molecule, which is the same as reported work [4, 9]. Geometric parameters (bond lengths and bond angles) are all in the normal ranges [10], [11], [12]. The title compound shows an E configuration around the C7=N1 bond. The C7=N1 and N4=C19 bond lengths (1.289(2), 1.282(2) Å) are typical for a C=N double bond [13]. In the title compound, the phenyl ring is nearly in the same plane with the pyridine ring in both independent molecules.
Funding source: Zhejiang Shuren University Basic Scientific Research Special Funds
Award Identifier / Grant number: 2020XZ011
Funding source: Chemical Company for Research
Award Identifier / Grant number: KYY-HX-20210140
Award Identifier / Grant number: KYY-HX-20190720
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Author contributions: All the authors have accepted responsibility for the entire content of this submitted manuscript and approved submission.
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Research funding: This work was funded by Zhejiang Shuren University Basic Scientific Research Special Funds (No. 2020XZ011), the Chemical Company for Research (KYY-HX-20210140, KYY-HX-20190720).
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Conflict of interest statement: The authors declare no conflicts of interest regarding this article.
References
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© 2022 Bin-Yu Zheng et al., published by De Gruyter, Berlin/Boston
This work is licensed under the Creative Commons Attribution 4.0 International License.
Articles in the same Issue
- Frontmatter
- New Crystal Structures
- Crystal structure of (E)-(4-imidazol-1-yl-phenyl)-(2-methoxy-benzylidene)-amine monohydrate, C17H17N3O2
- Crystal structure of 6-methyl-3-(pyrrolidine-1-carbonyl)-2H-chromen-2-one, C15H15N1O3
- Crystal structure of 4-methyl-4-nitropentanoic acid, C6H11NO4
- The crystal structure of (E)-3-(furan-2-yl)acrylonitrile, C7H5NO
- Crystal structure of 3-(difluoromethyl)-1-methyl-N-(4,11,11-trimethyl-1,2,3,4-tetrahydro-1,4-methanoacridin-9-yl)-1H-pyrazole-4-carboxamide monohydrate, C23H26F2N4O3
- Crystal structure of 2-(4-bromobenzyloxy)-6-chloropyridine, C12H9BrClNO
- Crystal structure of N-(4-bromo-2,6-dichloro-phenyl)pyrazin-2-amine, C10H6BrCl2N3
- Crystal structure of (E)-1-(2–nitrophenyl)-3-phenylprop-2-en-1-one, C15H11NO3
- The crystal structure of (E)-3-chloro-2-(2-(4-fluorobenzylidene)hydrazinyl)pyridine, C12H9ClFN3
- Crystal structure of (E)-amino(2-(thiazol-2-ylmethylene)hydrazineyl)methaniminium nitrate, C10H16N12O6S2
- Crystal structure of 9-methoxy-2,3,4,4a,5,6-hexahydro-1H-pyrido [1′,2′:1,6]pyrazino[2,3-b]quinoxaline, C15H18N4O
- The crystal structure bis(dimethylsulfoxide-κ1O)-dipyridine-κ1 N-bis(m2-(Z)-3-methyl-2-oxido-N-((Z)-oxido(phenyl)methylene)benzohydrazonato-κ5)trinickel(II) - dimethylsulfoxide (1/2), C48H56N6Ni3O10S4
- Crystal structure of bis(bis(triphenylphosphine)iminium) tetradecacarbonyltetratelluridopentaferrate(2-), (PPN)2[Fe5Te4(CO)14]
- Crystal structure of 4-Hydroxy-3-(naphthalen-2-ylthio)pent-3-en-2-one, C15H14O2S
- The crystal structure of [(1,10-phenanthroline-κ2 N,N)-bis(6-phenylpyridine-2-carboxylate-κ2 N,O)nickel(II)] monohydrate, C36H26N4O5Ni
- Crystal structure of 3,3′-(pyridine-2,6-diylbis(methylene))bis(1-propyl-1H-imidazol-3-ium) ditetrafluoroborate, C19H27B2F8N5
- The crystal structure of (E)-1-(4-aminophenyl)-3-(p-tolyl)prop-2-en-1-one, C16H15NO
- The crystal structure of poly[(μ2-terephthalato-κ4O,O′: O″,O‴)-(μ4-terephthalato-κ4O:O′:O″:O‴)-{μ4-(1,2,4,5-tetrakis(1,2,4-triazol-1-ylmethyl)-benzene-κ4O:O′:O″,O‴)}dicadmium(II)] – water – acetronitrile (1/2/2), C38H36N14O10Cd2
- The crystal structure of diaqua-bis(6-phenylpyridine-2-carboxylato-κ2 N,O)cobalt(II)–water–N,N-dimethylformamide(1/2/1), C27H31N3O9Co
- The co-crystal structure of 4-hydroxy-3-methoxybenzoic acid – 4,4′-bipyridine, C8H8O4·C10H8N2
- Crystal structure of catena-poly[(μ2-1,1′-(biphenyl-4,4′-diyl)bis(1H-imidazol)-κ2N:N′)-bis(4-bromobenzoate-κ1O)cobalt(II)], C32H22Br2CoN4O4
- Crystal structure of (E)-5-propyl-4-((pyridin-2-ylmethylene)amino)-2,4-dihydro-3H-1,2,4-triazole-3-thione – methanol (1/1), C11H13N5S
- The crystal structure of (Z)-4-bromo-6-(((1,3-dihydroxy-2-(hydroxymethyl)propan-2-yl)amino)methylene)cyclohexa-2,4-dien-1-one monohydrate, C11H16BrNO5
- Crystal structure of bis(tetrapropylammonium) nonaselenidotetrastannate(IV), (Pr4N)2[Sn4Se9]
- Crystal structure of 2,6-di-tert-butyl-4-(4-chlorobenzylidene)cyclohexa-2,5-dien-1-one, C21H25ClO
- Crystal structure of (2,2′-((naphthalen-1-ylmethyl)azanediyl)diacetato-κ3 N,O,O′)-(1,10-phenanthroline-κ2 N,N′)-copper(II) trihydrate, CuC27H27N3O7
- The crystal structure of tetrakis(6-phenylpyridine-2-carboxylato-κ2N,O)-bis(1H-pyrazol-3-ylamine-κ2 N:N)dicobalt(II) dihydrate, C27H23N5O5Co
- The crystal structure of bis((E)-2-((tert-butylimino)methyl)-4-chlorophenolato-κ2N,O)zinc(II), C22H26Cl2N2O2Zn
- The crystal structure of poly[diaqua-(μ3-5-nitrobenzene-1,2,3-tricarboxylato-κ3O:O′:O′)-(μ2-4,4′-dipyridylamine-κ2N:N′)copper(II)], C38H30Cu3N8O20
- The crystal structure of (E)-1-ferrocenyl-3-(naphthalen-1-yl)prop-2-en-1-one, C23H18FeO
- The crystal structure of (E)-1-ferrocenyl-3-(4-isopropylphenyl)prop-2-en-1-one, C22H22FeO
- Crystal structure of 6-hydroxy-2,2-dimethyl-4Hbenzo[d][1,3]dioxin-4-one, C10H10O4
- The crystal structure of (2E,4E)-1-ferrocenyl-5-phenylpenta-2,4-dien-1-one, C21H18FeO
- Crystal structure of alaninato-κ2N,O-bis(hydroxylamido-κ2N,O)-oxido-vanadium(V), C3H10N3O5V
- Crystal structure of catena-poly[aqua-bis[μ2-6-(1H-imidazol-1-yl)nicotinato-κ2 N,O]copper(II)], C18H14N6O5Cu
- Crystal structure of diethyl 4,6-diphenyl-1,9-di-p-tolylhexahydro-3H-2,7,3,5-(epimethanetriyliminomethanetriyl)cyclopenta[b]pyridine-3,5(2H)-dicarboxylate, C42H42N2O4
- The crystal structure of cobalt cadmium bis(hydrogenphosphate) bis(phosphate(V)) tetrahydrate, H10O20P4Co3.14Cd1.86
- Crystal structure of dimethyl 1,4,6,9-tetraphenylhexahydro-3H-2,7,3,5-(epimethanetriyliminomethanetriyl)cyclopenta[b]pyridine-3,7(2H)-dicarboxylate, C38H34N2O4
- Crystal structure of (Z)-4-(furan-2-yl((4-iodophenyl)amino)methylene)-5-methyl-2(p-tolyl)-2,4-dihydro-3H-pyrazol-3-one, C21H16I N3O2
- Crystal structure of (E)-1-(4-(3,5-dimethoxystyryl)phenyl)-7-ethylheptanedioate, C25H30O6
- Crystal structure of 6-bromo-2-(4-chlorophenyl)chroman-4-one (6-bromo-4′-chloroflavanone), C15H10BrClO2
- The crystal structure of 2-(benzhydryloxy)-3-nitropyridine, C18H14N2O3
- The crystal structure of 1,3(4,1)-dipyridin-1-iuma-2(1,8)-diethynylanthracena-5(1,3)-benzenacyclohexaphane-11,31-diium bis(hexafluoridophosphate), C36H24F12N2P2
- Crystal structure of 3,6-di-tert-butyl-1-iodo-9-methyl-8-(pyren-1-ylethynyl)-9H-carbazole, C39H34IN
- The cocrystal 2-(dimethylammonio)-5-nitrobenzoate – 2-(dimethylamino)-5-nitrobenzoic acid, C9H10N2O4
- Crystal structure of 5-nitroquinazolin-4(3H)-one, C8H5N3O3
Articles in the same Issue
- Frontmatter
- New Crystal Structures
- Crystal structure of (E)-(4-imidazol-1-yl-phenyl)-(2-methoxy-benzylidene)-amine monohydrate, C17H17N3O2
- Crystal structure of 6-methyl-3-(pyrrolidine-1-carbonyl)-2H-chromen-2-one, C15H15N1O3
- Crystal structure of 4-methyl-4-nitropentanoic acid, C6H11NO4
- The crystal structure of (E)-3-(furan-2-yl)acrylonitrile, C7H5NO
- Crystal structure of 3-(difluoromethyl)-1-methyl-N-(4,11,11-trimethyl-1,2,3,4-tetrahydro-1,4-methanoacridin-9-yl)-1H-pyrazole-4-carboxamide monohydrate, C23H26F2N4O3
- Crystal structure of 2-(4-bromobenzyloxy)-6-chloropyridine, C12H9BrClNO
- Crystal structure of N-(4-bromo-2,6-dichloro-phenyl)pyrazin-2-amine, C10H6BrCl2N3
- Crystal structure of (E)-1-(2–nitrophenyl)-3-phenylprop-2-en-1-one, C15H11NO3
- The crystal structure of (E)-3-chloro-2-(2-(4-fluorobenzylidene)hydrazinyl)pyridine, C12H9ClFN3
- Crystal structure of (E)-amino(2-(thiazol-2-ylmethylene)hydrazineyl)methaniminium nitrate, C10H16N12O6S2
- Crystal structure of 9-methoxy-2,3,4,4a,5,6-hexahydro-1H-pyrido [1′,2′:1,6]pyrazino[2,3-b]quinoxaline, C15H18N4O
- The crystal structure bis(dimethylsulfoxide-κ1O)-dipyridine-κ1 N-bis(m2-(Z)-3-methyl-2-oxido-N-((Z)-oxido(phenyl)methylene)benzohydrazonato-κ5)trinickel(II) - dimethylsulfoxide (1/2), C48H56N6Ni3O10S4
- Crystal structure of bis(bis(triphenylphosphine)iminium) tetradecacarbonyltetratelluridopentaferrate(2-), (PPN)2[Fe5Te4(CO)14]
- Crystal structure of 4-Hydroxy-3-(naphthalen-2-ylthio)pent-3-en-2-one, C15H14O2S
- The crystal structure of [(1,10-phenanthroline-κ2 N,N)-bis(6-phenylpyridine-2-carboxylate-κ2 N,O)nickel(II)] monohydrate, C36H26N4O5Ni
- Crystal structure of 3,3′-(pyridine-2,6-diylbis(methylene))bis(1-propyl-1H-imidazol-3-ium) ditetrafluoroborate, C19H27B2F8N5
- The crystal structure of (E)-1-(4-aminophenyl)-3-(p-tolyl)prop-2-en-1-one, C16H15NO
- The crystal structure of poly[(μ2-terephthalato-κ4O,O′: O″,O‴)-(μ4-terephthalato-κ4O:O′:O″:O‴)-{μ4-(1,2,4,5-tetrakis(1,2,4-triazol-1-ylmethyl)-benzene-κ4O:O′:O″,O‴)}dicadmium(II)] – water – acetronitrile (1/2/2), C38H36N14O10Cd2
- The crystal structure of diaqua-bis(6-phenylpyridine-2-carboxylato-κ2 N,O)cobalt(II)–water–N,N-dimethylformamide(1/2/1), C27H31N3O9Co
- The co-crystal structure of 4-hydroxy-3-methoxybenzoic acid – 4,4′-bipyridine, C8H8O4·C10H8N2
- Crystal structure of catena-poly[(μ2-1,1′-(biphenyl-4,4′-diyl)bis(1H-imidazol)-κ2N:N′)-bis(4-bromobenzoate-κ1O)cobalt(II)], C32H22Br2CoN4O4
- Crystal structure of (E)-5-propyl-4-((pyridin-2-ylmethylene)amino)-2,4-dihydro-3H-1,2,4-triazole-3-thione – methanol (1/1), C11H13N5S
- The crystal structure of (Z)-4-bromo-6-(((1,3-dihydroxy-2-(hydroxymethyl)propan-2-yl)amino)methylene)cyclohexa-2,4-dien-1-one monohydrate, C11H16BrNO5
- Crystal structure of bis(tetrapropylammonium) nonaselenidotetrastannate(IV), (Pr4N)2[Sn4Se9]
- Crystal structure of 2,6-di-tert-butyl-4-(4-chlorobenzylidene)cyclohexa-2,5-dien-1-one, C21H25ClO
- Crystal structure of (2,2′-((naphthalen-1-ylmethyl)azanediyl)diacetato-κ3 N,O,O′)-(1,10-phenanthroline-κ2 N,N′)-copper(II) trihydrate, CuC27H27N3O7
- The crystal structure of tetrakis(6-phenylpyridine-2-carboxylato-κ2N,O)-bis(1H-pyrazol-3-ylamine-κ2 N:N)dicobalt(II) dihydrate, C27H23N5O5Co
- The crystal structure of bis((E)-2-((tert-butylimino)methyl)-4-chlorophenolato-κ2N,O)zinc(II), C22H26Cl2N2O2Zn
- The crystal structure of poly[diaqua-(μ3-5-nitrobenzene-1,2,3-tricarboxylato-κ3O:O′:O′)-(μ2-4,4′-dipyridylamine-κ2N:N′)copper(II)], C38H30Cu3N8O20
- The crystal structure of (E)-1-ferrocenyl-3-(naphthalen-1-yl)prop-2-en-1-one, C23H18FeO
- The crystal structure of (E)-1-ferrocenyl-3-(4-isopropylphenyl)prop-2-en-1-one, C22H22FeO
- Crystal structure of 6-hydroxy-2,2-dimethyl-4Hbenzo[d][1,3]dioxin-4-one, C10H10O4
- The crystal structure of (2E,4E)-1-ferrocenyl-5-phenylpenta-2,4-dien-1-one, C21H18FeO
- Crystal structure of alaninato-κ2N,O-bis(hydroxylamido-κ2N,O)-oxido-vanadium(V), C3H10N3O5V
- Crystal structure of catena-poly[aqua-bis[μ2-6-(1H-imidazol-1-yl)nicotinato-κ2 N,O]copper(II)], C18H14N6O5Cu
- Crystal structure of diethyl 4,6-diphenyl-1,9-di-p-tolylhexahydro-3H-2,7,3,5-(epimethanetriyliminomethanetriyl)cyclopenta[b]pyridine-3,5(2H)-dicarboxylate, C42H42N2O4
- The crystal structure of cobalt cadmium bis(hydrogenphosphate) bis(phosphate(V)) tetrahydrate, H10O20P4Co3.14Cd1.86
- Crystal structure of dimethyl 1,4,6,9-tetraphenylhexahydro-3H-2,7,3,5-(epimethanetriyliminomethanetriyl)cyclopenta[b]pyridine-3,7(2H)-dicarboxylate, C38H34N2O4
- Crystal structure of (Z)-4-(furan-2-yl((4-iodophenyl)amino)methylene)-5-methyl-2(p-tolyl)-2,4-dihydro-3H-pyrazol-3-one, C21H16I N3O2
- Crystal structure of (E)-1-(4-(3,5-dimethoxystyryl)phenyl)-7-ethylheptanedioate, C25H30O6
- Crystal structure of 6-bromo-2-(4-chlorophenyl)chroman-4-one (6-bromo-4′-chloroflavanone), C15H10BrClO2
- The crystal structure of 2-(benzhydryloxy)-3-nitropyridine, C18H14N2O3
- The crystal structure of 1,3(4,1)-dipyridin-1-iuma-2(1,8)-diethynylanthracena-5(1,3)-benzenacyclohexaphane-11,31-diium bis(hexafluoridophosphate), C36H24F12N2P2
- Crystal structure of 3,6-di-tert-butyl-1-iodo-9-methyl-8-(pyren-1-ylethynyl)-9H-carbazole, C39H34IN
- The cocrystal 2-(dimethylammonio)-5-nitrobenzoate – 2-(dimethylamino)-5-nitrobenzoic acid, C9H10N2O4
- Crystal structure of 5-nitroquinazolin-4(3H)-one, C8H5N3O3