Home Synthesis and crystal structure of 3-methyl-2-(methylthio)-4H-chromen-4-one, C12H12O2S
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Synthesis and crystal structure of 3-methyl-2-(methylthio)-4H-chromen-4-one, C12H12O2S

  • Feng Liu , Yuming Zhang , Zhimeng Zhao , Yi Liu , Yang Chen and Tao Xiao ORCID logo EMAIL logo
Published/Copyright: May 24, 2023

Abstract

C12H12O2S, monoclinic, P21/c (no. 14), a = 7.4771(1) Å, b = 8.6860(1) Å, c = 16.0445(2) Å, β =  95.374 ( 1 ) , V = 1037.45(2) Å3, Z = 4, R gt (F) = 0.0311, wR ref (F 2) = 0.1156, T = 293(2) K.

CCDC no.: 2261333

Table 1 contains crystallographic data and Table 2 contains the list of the atoms including atomic coordinates and displacement parameters.

Table 1:

Data collection and handling.

Crystal: Colourless block
Size: 0.20 × 0.10 × 0.10 mm
Wavelength: Cu Kα radiation (1.54178 Å)
μ: 2.57 mm−1
Diffractometer, scan mode: XtaLAB Synergy, ω
θ max, completeness: 75.1°, >99 %
N(hkl)measured, N(hkl)unique, R int: 9298, 2062, 0.030
Criterion for I obs, N(hkl)gt: I obs > 2σ(I obs), 1952
N(param)refined: 136
Programs: Bruker [1], SHELX [2, 3]
Table 2:

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2).

Atom x y z U iso*/U eq
S 0.12584 (4) 0.78885 (3) 0.04374 (2) 0.01739 (17)
O1 0.24912 (11) 0.53637 (9) 0.11665 (5) 0.0151 (2)
C1 0.23558 (15) 0.53453 (13) −0.03427 (7) 0.0145 (3)
O2 0.33932 (13) 0.31246 (10) −0.10041 (6) 0.0192 (2)
C2 0.30957 (16) 0.38017 (14) −0.03539 (7) 0.0142 (3)
C3 0.34613 (16) 0.30782 (13) 0.04760 (8) 0.0141 (3)
C4 0.40987 (17) 0.15659 (14) 0.05521 (8) 0.0166 (3)
H4A 0.4292 0.1010 0.0073 0.020*
C5 0.44444 (17) 0.08887 (14) 0.13297 (8) 0.0175 (3)
H5A 0.4876 −0.0115 0.1374 0.021*
C6 0.41409 (17) 0.17241 (15) 0.20532 (8) 0.0174 (3)
H6A 0.4382 0.1274 0.2578 0.021*
C7 0.34853 (16) 0.32141 (14) 0.19896 (8) 0.0158 (3)
H7A 0.3267 0.3765 0.2467 0.019*
C8 0.31579 (16) 0.38761 (13) 0.11982 (7) 0.0136 (3)
C9 0.21087 (16) 0.60210 (13) 0.04035 (7) 0.0140 (3)
C10 0.18689 (18) 0.61597 (14) −0.11580 (7) 0.0178 (3)
H10A 0.2137 0.5507 −0.1613 0.027*
H10B 0.0609 0.6397 −0.1210 0.027*
H10C 0.2549 0.7095 −0.1172 0.027*
C11 0.08496 (19) 0.81606 (14) 0.15264 (8) 0.0187 (3)
H11A 0.0126 0.7325 0.1714 0.022*
H11B 0.1976 0.8193 0.1879 0.022*
C12 −0.01438 (18) 0.96876 (14) 0.15675 (8) 0.0209 (3)
H12A −0.0392 0.9884 0.2134 0.031*
H12B 0.0587 1.0502 0.1379 0.031*
H12C −0.1253 0.9639 0.1215 0.031*

1 Source of material

The 100 mL round bottom flask was filled with 2-hydroxypropiophenone (3 mmol), carbon disulfide (4.5 mmol), potassium carbonate (9 mmol) and bromoethane (4.5 mmol), DMSO (15 mL), and heated to 35 °C under efficient stirring. The reaction was monitored by thin layer chromatography (TLC, 254 nm). After the reaction is complete, the mixture is cooled to room temperature, poured into ice water. White solids are precipitated, filtered, washed with water and petroleum ether for three times, and the crude product is recrystallized with methanol: water = 5:1 to obtain the title compound.

2 Experimental details

Hydrogen atoms were placed in their geometrically idealized positions and constrained to ride on their parent atoms, with constrained isotropic displacement parameters.

3 Comment

Chromone is an important oxygen-containing heterocyclic compound, and is a scaffold of natural or synthetic compounds, which are common in nature, especially in plants. The chromone skeleton is part of a variety of drugs showing biological activities [4]. In addition to their pharmacological significance, several chromones are used in other fields [5, 6]. As shown in the figure, the molecule consists of chromone skeleton, methyl and ethyl thio groups. The crystal structure is shown: as molecules (upper figure) and as a packing diagram (lower part of the figure). The dihedral angle between benzo fragment (C3/C4/C5/C6/C7/C8) and oxygen-containing heterocycle (C9/C1/C2/C3/C8/O1) is 1.4 , and the bond angle between carbon-sulfur bond S–C9 and S–C11 is 104.2 , which is similar to the value found in literature [7]. The bond length and bond angle of the compound are in the normal range [8], [9], [10], [11], and no strong hydrogen bond is observed in the compound.


Corresponding author: Tao Xiao, Department of Chemistry and Molecular Engineering, Nanjing Tech University, 30 South Puzhu Road, Nanjing, 211816, China, E-mail:

Acknowledgements

We appreciate Wang huaqin in Nanjing University and Wu wenyuan in Nanjing Tech University for some data analysis.

  1. Author contributions: All the authors have accepted responsibility for the entire content of this submitted manuscript and approved submission.

  2. Research funding: Nanjing Senega Medical Technology Co. Ltd.

  3. Conflict of interest statement: The authors declare no conflicts of interest regarding this article.

References

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Received: 2023-04-17
Accepted: 2023-05-08
Published Online: 2023-05-24
Published in Print: 2023-08-28

© 2023 the author(s), published by De Gruyter, Berlin/Boston

This work is licensed under the Creative Commons Attribution 4.0 International License.

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