Home Physical Sciences Crystal structure of diethyl 6,12-bis(4-fluorophenyl)-2,10-dimethoxy-3,9-diphenyl-3,9-diazatetracyclo[6.4.0.02,7.04,11]dodecane-1,5-dicarboxylate, C42H42F2N2O6
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Crystal structure of diethyl 6,12-bis(4-fluorophenyl)-2,10-dimethoxy-3,9-diphenyl-3,9-diazatetracyclo[6.4.0.02,7.04,11]dodecane-1,5-dicarboxylate, C42H42F2N2O6

  • Yu-Kun Guo , Shi-Jun Chen , Meng-Meng Zhang , Han-Yang Lan , Yu-Cai Wang and Qi-Di Zhong ORCID logo EMAIL logo
Published/Copyright: December 5, 2019

Abstract

C42H42F2N2O6, monoclinic, P21/c (no. 14), a = 20.159(3) Å, b = 8.3357(10) Å, c = 21.372(3) Å, β = 103.130(3)°, V = 3497.4(8) Å3, Z = 4, Rgt(F) = 0.0414, wRref(F2) = 0.1083, T = 113(2) K.

CCDC no.: 1956172

The molecular structure is shown in the figure. Table 1 contains crystallographic data and Table 2 contains the list of the atoms including atomic coordinates and displacement parameters.

Table 1:

Data collection and handling.

Crystal:Colourless block
Size:0.20 × 0.18 × 0.12 mm
Wavelength:Mo Kα radiation (0.71073 Å)
μ:0.10 mm−1
Diffractometer, scan mode:Rigaku XtaLAB P200, φ and ω
θmax, completeness:27.5°, >99%
N(hkl)measured, N(hkl)unique, Rint:34082, 7964, 0.041
Criterion for Iobs, N(hkl)gt:Iobs > 2 σ(Iobs), 5896
N(param)refined:473
Programs:Bruker [1], SHELX [2], [3]
Table 2:

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2).

AtomxyzUiso*/Ueq
F1−0.01435(5)0.75232(14)−0.03799(4)0.0440(3)
F20.49393(5)0.75861(14)0.54127(4)0.0419(3)
O10.32187(5)1.31195(13)0.32407(5)0.0271(2)
O20.39822(5)1.16092(13)0.28865(5)0.0221(2)
O30.15176(5)1.30141(13)0.17742(5)0.0245(2)
O40.07266(5)1.14444(13)0.20600(5)0.0245(2)
O50.31576(5)0.67812(12)0.18228(5)0.0209(2)
O60.15775(5)0.69411(12)0.33085(5)0.0201(2)
N10.27325(6)0.93731(14)0.16444(5)0.0162(2)
N20.19957(6)0.95958(14)0.34262(5)0.0170(2)
C10.25495(7)1.05575(17)0.20678(6)0.0152(3)
H10.2602771.1658830.1900270.018*
C20.28978(7)1.04749(17)0.28164(6)0.0154(3)
C30.21775(7)1.06614(17)0.29588(6)0.0153(3)
H30.2108041.1799180.3077750.018*
C40.18345(7)1.03861(17)0.22216(6)0.0157(3)
C50.15341(7)0.87144(17)0.20765(6)0.0163(3)
H50.1246390.8487220.2390680.020*
C60.21343(7)0.75049(17)0.22097(6)0.0162(3)
H60.1931430.6404860.2155340.019*
C70.25956(7)0.75934(17)0.29018(6)0.0158(3)
H70.2804700.6507470.2998060.019*
C80.31955(7)0.88098(17)0.29907(6)0.0163(3)
H80.3466530.8526470.2668340.020*
C90.25458(7)0.77118(17)0.16934(6)0.0166(3)
H90.2256740.7366150.1270580.020*
C100.30597(9)0.5186(2)0.15932(9)0.0320(4)
H10A0.2748610.4628810.1811910.048*
H10B0.3498630.4625870.1679300.048*
H10C0.2864200.5197480.1129390.048*
C110.30550(7)0.98355(17)0.11512(6)0.0170(3)
C120.29845(7)0.89327(19)0.05862(7)0.0210(3)
H120.2730450.7962820.0537060.025*
C130.32847(8)0.9452(2)0.00984(7)0.0246(3)
H130.3232020.882992−0.0282210.030*
C140.36581(8)1.0853(2)0.01550(7)0.0274(4)
H140.3850781.121158−0.0186730.033*
C150.37466(8)1.1726(2)0.07183(7)0.0270(3)
H150.4007761.2685310.0765590.032*
C160.34581(7)1.12163(18)0.12154(7)0.0215(3)
H160.3535641.1813400.1603850.026*
C170.33721(7)1.18744(18)0.30192(6)0.0176(3)
C180.44757(8)1.2916(2)0.30365(8)0.0277(3)
H18A0.4538701.3238480.3492090.033*
H18B0.4314531.3859440.2762440.033*
C190.51311(11)1.2311(3)0.29112(15)0.0758(9)
H19A0.5287941.1387450.3189050.114*
H19B0.5474501.3163470.3002090.114*
H19C0.5060771.1986200.2460200.114*
C200.36639(7)0.85903(17)0.36550(6)0.0174(3)
C210.41003(7)0.72661(18)0.37362(7)0.0215(3)
H210.4101390.6586550.3379610.026*
C220.45320(8)0.6919(2)0.43242(7)0.0256(3)
H220.4825180.6013000.4375160.031*
C230.45223(8)0.7925(2)0.48298(7)0.0275(4)
C240.41052(8)0.9241(2)0.47759(7)0.0277(4)
H240.4112270.9915350.5135630.033*
C250.36704(8)0.95709(19)0.41829(7)0.0222(3)
H250.3376021.0473960.4139170.027*
C260.21829(7)0.79204(17)0.34119(6)0.0170(3)
H260.2475020.7638610.3841740.020*
C270.17268(9)0.53760(19)0.35671(8)0.0298(4)
H27A0.1997110.4795100.3313110.045*
H27B0.1300670.4796750.3553030.045*
H27C0.1985660.5457770.4013370.045*
C280.18993(7)1.02085(18)0.40220(6)0.0175(3)
C290.16124(8)0.92282(19)0.44216(7)0.0230(3)
H290.1469770.8171440.4288300.028*
C300.15349(8)0.9794(2)0.50137(7)0.0249(3)
H300.1350630.9103210.5284680.030*
C310.17194(8)1.1332(2)0.52150(7)0.0241(3)
H310.1649961.1715850.5613860.029*
C320.20079(8)1.23098(19)0.48256(7)0.0244(3)
H320.2140701.3371660.4959700.029*
C330.21055(8)1.17513(18)0.42387(7)0.0216(3)
H330.2314971.2428360.3982230.026*
C340.13518(7)1.17642(18)0.19790(6)0.0174(3)
C350.02079(8)1.2685(2)0.18625(8)0.0292(4)
H35A−0.0248811.2182190.1757240.035*
H35B0.0280581.3226800.1471200.035*
C360.02371(10)1.3888(2)0.23800(9)0.0380(4)
H36A0.0222021.3338860.2781900.057*
H36B−0.0152571.4617850.2261790.057*
H36C0.0661131.4503120.2438040.057*
C370.10883(7)0.84741(18)0.14034(6)0.0182(3)
C380.05863(8)0.72918(19)0.13215(7)0.0241(3)
H380.0533170.6688520.1684080.029*
C390.01616(8)0.6969(2)0.07258(8)0.0300(4)
H39−0.0183630.6173340.0677170.036*
C400.02596(8)0.7843(2)0.02107(7)0.0296(4)
C410.07489(8)0.9015(2)0.02611(7)0.0272(4)
H410.0802890.959479−0.0106860.033*
C420.11637(7)0.93325(19)0.08640(7)0.0215(3)
H420.1502071.0143930.0908160.026*

Source of material

Preparation of 1,4-diaryl-1,4-dihydropyridine-3-carboxylic acid photoreactive raw materials was performed by a literature method [4]. Starting with 4-fluoroaniline (0.5 mmol) ethyl propiolate (0.5 mmol) and 4-fluorocinnamaldehyde (0.5 mmol) as starting materials; piperazine (0.25 mmol) and p-toluenesulfonic (0.02 mmol) acid were used as catalysts, and 1,2-dichloroethane (20 mL) was used as a solvent. The mixture was heated under reflux for 12 h to obtain 1,4-(4-fluoro-diaryl)-1,4-dihydrogen ethyl pyridine-3-carboxylate. The product of 1,4-(4-fluoro-diaryl)-1,4-dihydrogen ethyl pyridine-3-carboxylate (0.5 mmol) obtained in the first step of the reaction was placed on a blue LED (410 nm) for a photoreaction for 3 h [5]. The product was obtained by column chromatography eluting with petroleum ether and n-hexane 10:1. The resulting solution was evaporated to dryness to get some crystals.

Experimental details

All hydrogen atoms were placed in the calculated positions and all the non-hydrogen atoms were refined anisotropically.

Comment

Cage dimer 4-aryl-1,4-dihydropyridines have a wide range of biological activities, such as anti-HIV and as an anti-multidrug resistance modulator [6], [7], [8]. The caged dimeric compound similar to the title compound has also been reported [9], [10], which is a dimerization by photoreaction to produce a cage compound, but the title compound is not completely cyclized (see the figure). The group characteristics and structure-activity relationship of the photoreactive raw materials have a great influence on the yield of the title compound. When a strong electron withdrawing group is attached to the fourth phenyl group, the photoproduct is one and a half cyclodimeric compounds with higher yields. In the crystal structure, several important bond angle data are involved as follows N1—C1—C4 = 116.80(11)°, C3—C2—C1 = 88.51(9)°, C4—C5—C37 = 115.71(11)°, C11—N1—C9 = 120.15(11)°. The bond lengths and angles are in the expected ranges.

Acknowledgements

This work was supported by the Youth Foundation of Hebei Educational Committee (Project No. QN2019165), the Technology and Science Research Foundation of North China University of Science and Technology.

References

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Received: 2019-09-29
Accepted: 2019-11-22
Published Online: 2019-12-05
Published in Print: 2020-02-25

©2019 Yu-Kun Guo et al., published by De Gruyter, Berlin/Boston

This work is licensed under the Creative Commons Attribution 4.0 Public License.

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  55. Crystal structure of bis(3-methoxy-N-(1-(pyridin-2-yl)ethylidene)benzohydrazonato κ3O,N,N′)zinc(II), C30H28N6O4Zn
  56. Crystal structure of dichlorido-(4,4′-dichloro-2,2′-bipyridine-κ2N,N′)platinum(II) — acetone (1/1), C13H12Cl4N2PtO
  57. Crystal structure of diethyl 6,12-bis(4-fluorophenyl)-2,10-dimethoxy-3,9-diphenyl-3,9-diazatetracyclo[6.4.0.02,7.04,11]dodecane-1,5-dicarboxylate, C42H42F2N2O6
  58. Synthesis and crystal structure of (1E,3E)-2-hydroxy-5-methylisophthalaldehyde O,O-di(2-((((E)-(2-hydroxynaphthalen-1-yl)methylene)amino)oxy)ethyl) dioxime, C35H32N4O7
  59. The crystal structure of 2-phenyl-4,6-bis(prop-2-yn-1-yloxy)-1,3,5-triazine, C15H11N3O2
  60. Crystal structure of 7-(2-{4-[(4-bromophenyl)methyl]piperazin-1-yl}ethoxy)-2H-chromen-2-one, C22H23BrN2O3
  61. Crystal structure of bis-[N-(3-ethyl-1-pyrazin-2-yl-ethylidene)-3-bromo-benzoic acid-hydrazonato-κ3O,N,N′)]-cadmium(II), C30H28N8O2Br2Cd
  62. Crystal structure of 6-(4-fluorophenyl)-4-methoxy-2H-pyran-2-one, C12H9FO3
  63. Crystal structure of 3-methyl-3-(2,4,5-trimethyl-3,6-dioxocyclohexa-1,4-dien-1-yl)butanoic acid, C14H18O4
  64. The crystal structure of 3-bromo-6-methoxy-2-methyl-5-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)pyridine, C13H19BBrNO3
  65. The crystal structure of 6-methyl-3,20-dioxo-19-norpregna-4,6-dien-17-yl acetate–2,4-dihydroxybenzoic acid (1/1), C30H36O8
  66. The crystal structure of (5-chloro-2-hydroxy-N-(4-methoxy-2-oxidobenzylidene)benzohydrazonato-κ3N,O,O′)-(pyridine-κ1N)copper(II), C20H16ClCuN3O4
  67. Crystal structure of (E)-2-cyano-N′-(1-(3-ethylpyrazin-2-yl)ethylidene)acetohydrazide, C11H3N5O
  68. Crystal structure of (2,7-dihexyl-9,9-dimethyl-9H-xanthene-4,5-diyl)bis(diphenylphosphane), C51H56OP2
  69. Crystal structure of 5-((bis(pyridin-2-ylmethyl)amino)methyl)quinolin-8-ol, C22H20N4O
  70. Crystal structure of 3-(2-(5-(4-fluorophenyl)-3-(4-methylphenyl)-4,5-dihydro-1H-pyrazol-1-yl)thiazol-4-yl)-2H-chromen-2-one, C28H20FN3O2S
  71. The crystal structure of [(tetra-μ2-2,6-difluorobenzoato-κ2O:O′)-bis-(2,6-difluorobenzoato-κ2O:O′)-bis-(1,10-phenanthroline-κ2N:N′)]dierbium(III) C66H34N4O12F12Er2
  72. Crystal structure of bis(3-chloro-N-(1-(pyrazin-2-yl)ethylidene)benzohydrazonato-k3N,N′,O)nickel(II), C26H20N8O2Cl2Ni
  73. Crystal structure of (E)-3-(3-(5-methyl-1-phenyl-1H-1,2,3-triazol-4-yl)-1-phenyl-1H-pyrazol-4-yl)-1-phenylprop-2-en-1-one, C27H21N5O
  74. Crystal structure of (E)-N′-((4-aminophenyl)sulfonyl)-N,N-dimethylformimidamide, C9H13N3O2S
  75. Crystal structure of η6-p-cymene-iodido-(N-isopropyl-1-(pyridin-2-yl)methanimine-κ2N,N′)ruthenium(II) hexafluorophosphate(V), C19H26IN2F6Ru
  76. Crystal structure of 6-iodo-3-phenyl-2-propylquinazolin-4(3H)-one, C17H15IN2O
  77. Low temperature redetermination of the crystal structure of catena-poly[[tri-4-fluorobenzyltin(IV)]μ2-pyridine-4-carboxylato-κ2N:O], {C27H22F3NO2Sn}n
  78. Crystal structure of bis(2-propyl-1H-benzo[d]imidazol-3-ium) tetrachloridozincate(II), C10H13Cl4N2Zn
  79. The crystal structure of (Z)-3-hydrazono-5-nitroindolin-2-one – dimethyl sulfoxide (1/1), C8H6N4O3
  80. Crystal structure of bis-[N-(1-pyrazin-2-yl-ethylidene)-cyanoacetic acid-hydrazonato-κ3O,N,N′)]-zinc(II), C18H16N10O2Zn
  81. Crystal structure and photochromism of 1-(2,5-dimethyl-3-thienyl)-2-[2-methyl-5-(benzaldoxime)-3-thienyl] perfluorocyclopentene, C23H17F6NOS2
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