Home Crystal structure of (2,7-dihexyl-9,9-dimethyl-9H-xanthene-4,5-diyl)bis(diphenylphosphane), C51H56OP2
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Crystal structure of (2,7-dihexyl-9,9-dimethyl-9H-xanthene-4,5-diyl)bis(diphenylphosphane), C51H56OP2

  • Nonjabulo Nyalungu , Saba Alapour ORCID logo , Holger B. Friedrich EMAIL logo and Muhammad D. Bala
Published/Copyright: December 20, 2019

Abstract

C51H56OP2, monoclinic, C2/c (no. 15), a = 20.1788(4) Å, b = 13.0247(4) Å, c = 18.0172(5) Å, β = 119.874(2)°, V = 4106.1(2) Å3, Z = 4, Rgt(F) = 0.0363, wRref(F2) = 0.0981, T = 173(2) K.

CCDC no.: 1951463

The molecular structure is shown in the figure. Table 1 contains crystallographic data and Table 2 contains the list of the atoms including atomic coordinates and displacement parameters.

Table 1:

Data collection and handling.

Crystal:Yellow block
Size:0.39 × 0.25 × 0.17 mm
Wavelength:Mo Kα radiation (0.71073 Å)
μ:0.14 mm−1
Diffractometer, scan mode:Bruker SMART APEX-II, φ and ω
θmax, completeness:28.4°, >99%
N(hkl)measured, N(hkl)unique, Rint:31002, 4945, 0.038
Criterion for Iobs, N(hkl)gt:Iobs > 2 σ(Iobs), 4184
N(param)refined:247
Programs:Bruker [1], SHELX [2], WinGX/ORTEP [3]
Table 2:

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2).

AtomxyzUiso*/Ueq
P10.07415(2)−0.02859(2)0.20113(2)0.01293(9)
O10.0000000.11792(9)0.2500000.0144(2)
C10.14775(7)−0.02316(9)0.31482(8)0.0143(2)
C20.20754(8)0.04811(10)0.34784(8)0.0172(3)
H20.2101340.0981720.3110250.021*
C30.26319(8)0.04651(10)0.43391(8)0.0199(3)
H30.3037500.0949890.4555970.024*
C40.25943(8)−0.02611(11)0.48821(8)0.0210(3)
H40.297324−0.0271190.5471020.025*
C50.20051(8)−0.09693(11)0.45653(9)0.0228(3)
H50.198182−0.1467610.4936620.027*
C60.14458(8)−0.09535(10)0.37027(8)0.0189(3)
H60.103986−0.1437550.3490290.023*
C70.12841(7)−0.07824(9)0.15180(8)0.0137(2)
C80.20525(7)−0.10703(10)0.19706(8)0.0169(3)
H80.234366−0.0949310.2569380.020*
C90.23954(8)−0.15352(10)0.15477(9)0.0197(3)
H90.291538−0.1742000.1862730.024*
C100.19825(8)−0.16965(10)0.06731(9)0.0210(3)
H100.222115−0.2002840.0387550.025*
C110.12191(8)−0.14102(11)0.02132(9)0.0227(3)
H110.093562−0.151259−0.0388540.027*
C120.08712(8)−0.09733(10)0.06364(8)0.0187(3)
H120.034402−0.0801150.0322120.022*
C130.06851(7)0.10943(9)0.17670(7)0.0125(2)
C140.03279(7)0.17168(9)0.21044(7)0.0124(2)
C150.03150(7)0.27749(9)0.20529(7)0.0125(2)
C160.06258(7)0.32205(10)0.15837(7)0.0141(2)
H160.0612640.3946280.1525970.017*
C170.09513(7)0.26415(10)0.12011(7)0.0137(2)
C180.09870(7)0.15756(10)0.13103(7)0.0136(2)
H180.1222540.1170800.1067420.016*
C190.12675(7)0.31459(10)0.06852(8)0.0156(2)
H19A0.1779790.2858390.0865300.019*
H19B0.1328620.3890530.0812210.019*
C200.07554(7)0.29937(10)−0.02841(8)0.0167(3)
H20A0.1024080.326397−0.0576550.020*
H20B0.0674090.224904−0.0406430.020*
C21−0.00208(7)0.35201(10)−0.06542(8)0.0175(3)
H21A−0.0291240.325222−0.0362950.021*
H21B0.0057990.426607−0.0537680.021*
C22−0.05184(7)0.33523(10)−0.16158(8)0.0176(3)
H22A−0.0282410.370977−0.1911500.021*
H22B−0.0530470.260956−0.1738660.021*
C23−0.13352(8)0.37351(11)−0.19782(9)0.0213(3)
H23A−0.1565660.340123−0.1666820.026*
H23B−0.1326510.448454−0.1881950.026*
C24−0.18303(8)0.35160(12)−0.29307(9)0.0270(3)
H24A−0.1582880.379460−0.3237180.040*
H24B−0.2331490.383967−0.3145550.040*
H24C−0.1895300.277266−0.3022730.040*
C250.0000000.34456(13)0.2500000.0136(3)
C260.06485(8)0.41270(10)0.31693(8)0.0194(3)
H26A0.1050100.3691190.3604210.029*
H26B0.0444550.4579190.3442520.029*
H26C0.0862520.4543220.2886070.029*

Source of material

A solution of 2,7-di-n-hexyl-9,9-dimethylxanthene (1 g, 2.6 mmol), and tetramethylethylenediamine (1.0 mL, 6.7 mmol) in dry degassed Et2O (30 mL) was cooled to 0 °C. To the chilled solution, n-BuLi (4.2 mL, 6.7 mmol) was added dropwise. The reaction mixture was allowed to warm to room temperature and left to stir for 16 hours. The resulting dark red mixture was cooled to 0 °C and PPh2Cl (1.3 mL, 6.8 mmol) in dry hexane (4 mL) added dropwise. The reaction mixture slowly decolourised and a fine precipitate formed. The reaction was allowed to stir for further 16 hours. The reaction was slowly hydrolysed with a 25 mL 10% HCl/brine mixture (1/1). The organic layer was removed, and the aqueous layer extracted with DCM. Combined fractions were dried over anhydrous MgSO4, filtered, and evaporated to give a yellow oil. The crude product was washed with hexane (3 × 10 mL), dissolved in DCM, and an equal volume of EtOH added slowly. The solution was left to recrystallise at room temperature to give yellow crystals: yield 1.1 g (56%); 1H NMR (CDCl3, 400 MHz,) δ/ppm: 7.59–6.96 (m, 20 H P(C6H5)2 and 2H xanthene ring), 6.32 (bs, 2H), 2.38 (t, J = 7.5 Hz, 4H), 1.62 (s, 6H), 1.48–0.98 (m, 16H), 0.84 (t, J = 6.9 Hz, 6H); 13C NMR (CDCl3, 101 MHz) δ/ppm: 150.9 (t, J (P,C) = 19.6 Hz, CO), 137.7 (dd, J (P,C) = 7.2, 5.9 Hz, phenyl C-ipso, PC), 137.1 (C), 133.9 (t, J (P,C) = 10.4 Hz, CH phenyl), 131.9 (CH), 129.5 (C), 128.0–128.5 (m, CH phenyl), 126.2 (CH), 125.1 (dd, J = 10.6, 2.4 Hz, CHC-P), 35.3 (CH2), 31.9 (CH3), 31.6 (CH2), 31.2 (CH2), 28.6 (CH2), 22.6 (CH2), 14.1 (CH3); 31P NMR (CDCl3, 162 MHz) δ/ppm: −17.8 (s); IR (neat) ν/cm−1 3069, 3054, 2955, 2921, 2831, 1585, 1569, 1419, 1252, 1240, 737, 692; HR-MS (ESI): [M + H]+ m/z+ 747.3878, calcd. for C51H57OP2: 747.3879.

Experimental details

Non-hydrogen atoms were initially refined isotropically and then by anisotropic refinement with the full-matrix least-squares method against F2 using the SHELXL program [2] and molecular graphics were done using ORTEP-3 [3]. All hydrogen atoms were positioned geometrically, allowed to ride on their parent atoms and refined isotropically. The C—Haromatic, C—Hmethylene and C—Hmethyl distances were constrained to 0.950 Å, 0.99 Å and 0.98 Å.

Comment

Phosphorus is a very good heteroatom for ligand design as it can form particularly strong chelate complexes with late transition metals, as explained by hard soft acid base theory. Furthermore, the possibility of analysis by 31P NMR makes it an excellent choice for developing new ligands [4]. We have been particularly interested in bidentate phosphorus ligands with wide bite angles, with a focus upon the steric and electronic properties of the chiral phosphorus moieties [5], [6]. In this paper we report the synthesis and crystal structure of (2,7-dihexyl-9,9-dimethyl-9H-xanthene-4,5-diyl)bis(diphenylphosphane).

The asymmeric unit contains half a molecule of the title compound with an inversion centre at the pyranyl ring. In this structure, the n-hexyl chains project away from the xanthene rings in an extended zigzag, anti-conformation. The addition of alkyl group substituents to phenyl rings can result in the loss of aromaticity and subsequent solubility increase in a wider variety of polar and apolar solvents [7], [8]. The xanthene backbone is comparably planar with a smaller dihedral angle of 8.27(2)° when compared to values obtained for two different crystals of xantphos, 23.43(2)° [9] and 23.75(2)° [10]. A relatively longer intramolecular P—P distance of 4.181(2) Å compared to xantphos, 4.046(2) Å [9] and 4.059(2) Å [7] is also found for this compound. Other geometric paramteres are within the expected ranges [11].

Acknowledgements

This research was supported by grants from the National Research Foundation (NRF), South Africa. We thank Mr Sizwe J. Zamisa for assistance with X-ray crystallography.

References

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Received: 2019-10-16
Accepted: 2019-11-11
Published Online: 2019-12-20
Published in Print: 2020-02-25

©2019 Nonjabulo Nyalungu et al., published by De Gruyter, Berlin/Boston

This work is licensed under the Creative Commons Attribution 4.0 Public License.

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  64. The crystal structure of 3-bromo-6-methoxy-2-methyl-5-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)pyridine, C13H19BBrNO3
  65. The crystal structure of 6-methyl-3,20-dioxo-19-norpregna-4,6-dien-17-yl acetate–2,4-dihydroxybenzoic acid (1/1), C30H36O8
  66. The crystal structure of (5-chloro-2-hydroxy-N-(4-methoxy-2-oxidobenzylidene)benzohydrazonato-κ3N,O,O′)-(pyridine-κ1N)copper(II), C20H16ClCuN3O4
  67. Crystal structure of (E)-2-cyano-N′-(1-(3-ethylpyrazin-2-yl)ethylidene)acetohydrazide, C11H3N5O
  68. Crystal structure of (2,7-dihexyl-9,9-dimethyl-9H-xanthene-4,5-diyl)bis(diphenylphosphane), C51H56OP2
  69. Crystal structure of 5-((bis(pyridin-2-ylmethyl)amino)methyl)quinolin-8-ol, C22H20N4O
  70. Crystal structure of 3-(2-(5-(4-fluorophenyl)-3-(4-methylphenyl)-4,5-dihydro-1H-pyrazol-1-yl)thiazol-4-yl)-2H-chromen-2-one, C28H20FN3O2S
  71. The crystal structure of [(tetra-μ2-2,6-difluorobenzoato-κ2O:O′)-bis-(2,6-difluorobenzoato-κ2O:O′)-bis-(1,10-phenanthroline-κ2N:N′)]dierbium(III) C66H34N4O12F12Er2
  72. Crystal structure of bis(3-chloro-N-(1-(pyrazin-2-yl)ethylidene)benzohydrazonato-k3N,N′,O)nickel(II), C26H20N8O2Cl2Ni
  73. Crystal structure of (E)-3-(3-(5-methyl-1-phenyl-1H-1,2,3-triazol-4-yl)-1-phenyl-1H-pyrazol-4-yl)-1-phenylprop-2-en-1-one, C27H21N5O
  74. Crystal structure of (E)-N′-((4-aminophenyl)sulfonyl)-N,N-dimethylformimidamide, C9H13N3O2S
  75. Crystal structure of η6-p-cymene-iodido-(N-isopropyl-1-(pyridin-2-yl)methanimine-κ2N,N′)ruthenium(II) hexafluorophosphate(V), C19H26IN2F6Ru
  76. Crystal structure of 6-iodo-3-phenyl-2-propylquinazolin-4(3H)-one, C17H15IN2O
  77. Low temperature redetermination of the crystal structure of catena-poly[[tri-4-fluorobenzyltin(IV)]μ2-pyridine-4-carboxylato-κ2N:O], {C27H22F3NO2Sn}n
  78. Crystal structure of bis(2-propyl-1H-benzo[d]imidazol-3-ium) tetrachloridozincate(II), C10H13Cl4N2Zn
  79. The crystal structure of (Z)-3-hydrazono-5-nitroindolin-2-one – dimethyl sulfoxide (1/1), C8H6N4O3
  80. Crystal structure of bis-[N-(1-pyrazin-2-yl-ethylidene)-cyanoacetic acid-hydrazonato-κ3O,N,N′)]-zinc(II), C18H16N10O2Zn
  81. Crystal structure and photochromism of 1-(2,5-dimethyl-3-thienyl)-2-[2-methyl-5-(benzaldoxime)-3-thienyl] perfluorocyclopentene, C23H17F6NOS2
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