Startseite Naturwissenschaften Crystal structure of 5,5-difluoro-10-(4-fluorophenyl)-1,3,7,9-tetramethyl-5H-4l4,5l4-dipyrrolo[1,2-c:2′,1′-f][1,3,2]diazaborinine - a Z′ = 3 structure, C19H18B2F3N2
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Crystal structure of 5,5-difluoro-10-(4-fluorophenyl)-1,3,7,9-tetramethyl-5H-4l4,5l4-dipyrrolo[1,2-c:2′,1′-f][1,3,2]diazaborinine - a Z′ = 3 structure, C19H18B2F3N2

  • Yingfan Liu , Ming Yan , Xiaochuan Li EMAIL logo , Yajuan Li und Young-A Son
Veröffentlicht/Copyright: 16. Oktober 2017

Abstract

C19H18B2F3N2, triclinic, P1̅ (no. 2), a = 10.8885(6) Å, b = 13.9767(8) Å, c = 18.1330(10) Å, α = 79.3484(19)°, β = 86.2213(9)°; γ = 73.461(2)°; V = 2599.6(3) Å3, Z = 6, Rgt(F) = 0.0450, wRref(F2) = 0.1105, T = 296 K.

CCDC no.:: 1549494

One of three crystallographically independent molecules of the title crystal structure is shown in the figure. All atoms are shown as small spheres of arbitrary radii. Tables 1 and 2 contain details on crystal structure and measurement conditions and a list of the atoms including atomic coordinates and displacement parameters.

Table 1

Data collection and handling.

Crystal:Orange block
Size:0.14 × 0.11 × 0.10 mm
Wavelength:Mo Kα radiation (0.71073 Å)
μ:0.10 mm−1
Diffractometer, scan mode:Bruker SMART, φ and ω-scans
2θmax, completeness:26.5°, >99%
N(hkl)measured, N(hkl)unique, Rint:63046, 10788, 0.111
Criterion for Iobs, N(hkl)gt:Iobs > 2 σ(Iobs), 4308
N(param)refined:689
Programs:Bruker programs [1], SHELX [2], DIAMOND [3]
Table 2

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2).

AtomxyzUiso*/Ueq
B10.1134(3)0.5552(2)0.11819(15)0.0524(8)
C10.3422(2)0.57200(16)0.09178(12)0.0493(6)
C20.4443(2)0.57412(17)0.13251(13)0.0535(6)
H20.52260.58120.11230.064*
C30.4114(2)0.56400(16)0.20802(12)0.0461(6)
C40.2844(2)0.55504(16)0.21238(12)0.0426(6)
C50.2037(2)0.53680(15)0.27368(11)0.0428(6)
C60.0874(2)0.51881(17)0.26411(12)0.0472(6)
C7−0.0076(2)0.49321(19)0.31604(14)0.0611(7)
C8−0.1007(2)0.4820(2)0.27369(15)0.0721(8)
H8−0.17410.46420.29260.087*
C9−0.0682(2)0.50140(19)0.19805(14)0.0597(7)
C10−0.1429(2)0.5004(2)0.13194(14)0.0775(8)
H10A−0.17880.56860.10670.116*
H10B−0.21060.46980.14870.116*
H10C−0.08720.46210.09800.116*
C110.3322(2)0.58249(19)0.00852(11)0.0692(8)
H11A0.32490.5203−0.00350.104*
H11B0.40740.5974−0.01560.104*
H11C0.25790.6365−0.00880.104*
C120.4982(2)0.5619(2)0.26959(13)0.0682(8)
H12A0.57930.56830.24840.102*
H12B0.51100.49900.30400.102*
H12C0.45990.61720.29580.102*
C13−0.0116(3)0.4823(2)0.40002(13)0.0903(10)
H13A−0.09320.47420.41870.135*
H13B0.00080.54190.41410.135*
H13C0.05520.42400.42090.135*
C140.2452(2)0.53514(18)0.35024(12)0.0454(6)
C150.2307(2)0.6238(2)0.37650(13)0.0601(7)
H150.19510.68550.34580.072*
C160.2686(2)0.6225(2)0.44837(15)0.0727(8)
H160.25860.68250.46620.087*
C170.3202(3)0.5319(3)0.49163(15)0.0729(9)
C180.3371(3)0.4431(3)0.46864(15)0.0823(9)
H180.37380.38210.49990.099*
C190.2984(2)0.44484(19)0.39692(13)0.0669(8)
H190.30850.38410.38010.080*
F10.12780(14)0.48537(12)0.07111(7)0.0786(5)
F20.04239(13)0.64935(11)0.08222(8)0.0837(5)
F30.35646(15)0.53097(15)0.56242(8)0.1155(7)
N10.24523(16)0.56025(13)0.13933(9)0.0431(5)
N20.04546(17)0.52251(14)0.19155(10)0.0494(5)
B20.4617(3)0.1743(2)0.67844(16)0.0599(8)
C200.6907(3)0.11108(19)0.62774(14)0.0633(7)
C210.8138(3)0.07493(19)0.65517(14)0.0655(7)
H210.88710.04980.62750.079*
C220.8107(2)0.08202(18)0.72978(14)0.0551(7)
C230.6797(2)0.12492(16)0.74796(12)0.0477(6)
C240.6172(2)0.14288(16)0.81548(12)0.0445(6)
C250.4836(2)0.17704(17)0.82042(12)0.0496(6)
C260.3984(2)0.20391(18)0.88107(14)0.0569(7)
C270.2773(3)0.23071(19)0.85270(16)0.0697(8)
H270.20170.25200.87960.084*
C280.2851(3)0.22100(19)0.77737(16)0.0654(7)
C290.1775(2)0.2391(2)0.72467(16)0.0979(10)
H29A0.19060.28360.67960.147*
H29B0.09790.26950.74810.147*
H29C0.17500.17570.71240.147*
C300.6502(3)0.1161(2)0.54964(13)0.0882(9)
H30A0.60550.06600.54940.132*
H30B0.72440.10330.51740.132*
H30C0.59450.18220.53190.132*
C310.4277(2)0.20800(19)0.95967(13)0.0727(8)
H31A0.35300.24760.98240.109*
H31B0.49650.23850.95900.109*
H31C0.45250.14050.98810.109*
C320.9266(2)0.0479(2)0.77832(14)0.0749(8)
H32A0.99820.01050.75190.112*
H32B0.91010.00530.82360.112*
H32C0.94590.10590.79060.112*
C330.6933(2)0.11820(17)0.88506(12)0.0470(6)
C340.7680(2)0.17781(17)0.89849(13)0.0552(7)
H340.77090.23520.86390.066*
C350.8390(2)0.1522(2)0.96370(15)0.0668(8)
H350.88980.19170.97320.080*
C360.8323(3)0.0678(2)1.01331(14)0.0689(8)
C370.7614(3)0.0066(2)1.00201(14)0.0725(8)
H370.7604−0.05111.03670.087*
C380.6904(2)0.03272(18)0.93704(13)0.0612(7)
H380.6401−0.00770.92820.073*
F40.41987(13)0.09900(11)0.65645(8)0.0809(5)
F50.42002(15)0.26266(11)0.62721(7)0.0899(5)
F60.90036(16)0.04378(13)1.07753(8)0.1102(6)
N30.60877(19)0.14154(14)0.68275(10)0.0521(5)
N40.40927(19)0.19032(14)0.75727(10)0.0523(5)
B31.0271(3)−0.1890(3)0.61241(17)0.0631(9)
C391.1341(2)−0.2214(2)0.74012(16)0.0721(8)
C401.0985(2)−0.2320(2)0.81577(16)0.0729(8)
H401.1526−0.24190.85570.087*
C410.9699(2)−0.22514(18)0.82146(13)0.0556(7)
C420.9258(2)−0.20962(17)0.74699(12)0.0494(6)
C430.8065(2)−0.19639(16)0.71764(12)0.0450(6)
C440.7871(2)−0.18185(17)0.64087(13)0.0513(6)
C450.6773(2)−0.16952(18)0.59787(13)0.0575(7)
C460.7164(3)−0.1608(2)0.52409(14)0.0732(8)
H460.6648−0.15260.48320.088*
C470.8459(3)−0.1661(2)0.52064(14)0.0714(8)
C480.9296(3)−0.1581(3)0.45221(14)0.1106(12)
H48A0.9914−0.12410.46020.166*
H48B0.8778−0.12030.40990.166*
H48C0.9731−0.22480.44260.166*
C491.2638(2)−0.2232(3)0.70679(17)0.1169(13)
H49A1.2870−0.27150.67340.175*
H49B1.3254−0.24200.74610.175*
H49C1.2622−0.15710.67950.175*
C500.5424(2)−0.1656(2)0.62374(13)0.0733(8)
H50A0.4948−0.17190.58310.110*
H50B0.5029−0.10210.64000.110*
H50C0.5434−0.22010.66470.110*
C510.8959(2)−0.23253(19)0.89411(13)0.0707(8)
H51A0.9484−0.23180.93440.106*
H51B0.8715−0.29450.90310.106*
H51C0.8205−0.17600.89130.106*
C520.6942(2)−0.19841(18)0.76891(11)0.0409(5)
C530.6065(2)−0.10991(18)0.78123(12)0.0540(6)
H530.6204−0.04800.75980.065*
C540.4985(2)−0.11155(19)0.82482(13)0.0592(7)
H540.4392−0.05180.83320.071*
C550.4813(2)−0.2035(2)0.85531(12)0.0549(7)
C560.5651(2)−0.2919(2)0.84566(13)0.0638(7)
H560.5507−0.35330.86800.077*
C570.6734(2)−0.28946(18)0.80166(13)0.0554(7)
H570.7324−0.34980.79420.066*
F71.11273(14)−0.26954(13)0.58522(8)0.0917(5)
F81.06157(14)−0.10132(12)0.58285(8)0.0885(5)
F90.37333(13)−0.20582(12)0.89725(8)0.0869(5)
N51.03099(18)−0.20748(15)0.69824(11)0.0590(6)
N60.89033(18)−0.17926(15)0.59073(11)0.0594(6)

Source of material

The title compound was synthesized according to the literature procedures [4, 5] . The colorless crystals of the title compound were obtained by slow evaporation of a dichloromethane solution at room temperature.

Experimental details

The hydrogen atoms were placed geometrically and refined using a riding model with d(C—H) = 0.93 Å (aromatic), 0.96 Å (−CH3). Uiso(H) = 1.2 Ueq(C) for CH or Uiso(H) = 1.5 Ueq(C) for CH3 groups.

Discussion

4,4′-Difluoro-4-bora-3a,4a-diaza-s-indacene (BODIPY) is a typical member of fluorine-boron complex, which has drawn great attention owing to its high molar extinction coefficient, narrow full width at half maximum, outstanding quantum yields, and excellent photo-/thermal resistance [6], [7], [8], [9], [10]. Introduction of fluorine could enhance the emission quantum yield further [5]. In this contribution, the title crystal structure was built up from C19H18B2F3N2 with three title molecules in the asymmetric unit. The BODIPY core rings of the three independent molecules are planar and the mean deviations are estimated to be 0.067, 0.036, and 0.014 Å for B1N2C3—C11N12, B26N27C28—C36N37, and B51N52C53—C61N62, respectively. The dihedral angles between the 4-fluorophenyl ring and the plane of the BODIPY core varied and contributed to different configurations of the title molecules. The angles were estimated to be 99.0°, 106.1°, and 82.1° for the plane of BODIPY core and the 4-fluorophenyl ring connected with each other, which were controlled by intramolecular C—H⋯π interactions [11]. Totally, there exist three fluorine atoms in each molecule. And all of them seem to be involved in C—H⋯F interactions. For the fluorine atoms attaching to the boron atom, eight distance of C⋯F varied from 3.33 to 3.55 Å, which fall inside of the normal C⋯F interval of C—H⋯F interactions. Among the weak interactions mentioned above, the C—H⋯F interactions contribute to join the molecules into crystals. Presumably, the intramolecular C—H⋯π interactions were interfered by the stronger C—H⋯F interactions and led to three different molecules in the asymmetric unit. Owing to the various interactions observed in the crystal, the molecules were staggered layer by layer along the axis c. H⋯F interactions join the layers side by side.

Acknowledgement

This work was supported by the National Natural Science Foundation of China (21272060). This work was supported by the industrial Fundamental Technology Development Program (10076350) funded by the Ministry of Trade, Industry and Energy (MOTIE) of Korea.

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Received: 2017-6-9
Accepted: 2017-9-30
Published Online: 2017-10-16
Published in Print: 2017-11-27

©2017 Yingfan Liu et al., published by De Gruyter, Berlin/Boston

This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 License.

Artikel in diesem Heft

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  39. Crystal structure of bis(N,N,N-ethyldimethylethanaminium) bis(heptaselenido-κ2Se1,Se7)palladate(II), C12H32N2PdSe14
  40. Crystal structure of bis(4-(1H-pyrazol-5-yl)pyridine-κ2N:N′)-bis(2-(2-((2,6-difluorophenyl)amino)phenyl)acetate-κO)cadmium(II), C44H34N8CdCl4O4
  41. Crystal structure of 4,4′-(1,4-phenylene)bis(pyridin-1-ium) catena-poly[diaqua-bis(μ2-3′,5′-dicarboxy-[1,1′-biphenyl]-2,5-dicarboxylato-κ2O:O′] dihydrate, C48H42O22N2Ca
  42. The crystal structure of (S)-2-benzylsuccinic acid, C11H12O4
  43. Crystal structure of poly[aqua-(μ3-4-(pyridin-4-yl)isophthalato-κ4O,O′:O′′:O′′′)-(μ2-5-carboxy-2-(pyridin-4-yl)benzoato-κ2O:O′)yttrium(III)], C26H17N2O9Y
  44. Crystal structure of ethyl 1-(3,4-dimethylphenyl)-5-methyl-1H-1,2,3-triazole-4-carboxylate, C14H17N3O2
  45. Crystal structure of tetrakis(methanol-κO)-bis{μ2-3-((4-methoxy-2-oxidobenzylidene)amino)-2-oxo-2H-chromen-4-olate-κ4O,N;O′:O′}dizinc(II), C38H38Zn2N2O14
  46. Crystal structure of bromido(4,4′-dimethoxy-2,2′-bipyridine-κ2N,N′)(isopropyl(diphenyl)phosphane-κP)copper(I), C27H29BrCuN2O2P
  47. Crystal structure of bis(4,4,5,5-tetramethyl-1,3,2-dioxaborolane)-9,9-dioctylfluorene, C41H64B2O4
  48. Crystal structure of 11-oxo-2,3,6,7-tetrahydro-1H,5H,11H-pyrano[2,3-f]pyrido[3,2,1-ij]quinoline-10-carbaldehyde - a julolidine derivative, C16H15NO3
  49. Crystal structure of 1,3-dimethyl-5,5-dibenzylbarbituric acid, C20H20N2O3
  50. Crystal structure of bis(N,N,N-trimethylethanaminium) poly[bis(μ2-heptaselenido-κ2Se1,Se7)palladate(II)], C10H28N2PdSe14
  51. Crystal structure of 1-{4-[(5-Chloro-2-hydroxy-benzylidene)amino]phenyl} ethanone O-ethyl-oxime, C17H17ClN2O2
  52. The crystal structure of methyl N-(4-bromophenyl)carbamate, C8H8BrNO2
  53. Synthesis and crystal structure of 1-{4-[(2-hydroxy-benzylidene)amino]phenyl}ethanone oxime, C15H14N2O2
  54. Crystal structure of 1,1′-butanebis(3-methyl-1H-imidazol-3-ium)bis(hexafluorophosphate), C12H20F12N4P2
  55. (E)-N-benzylidene-3-(benzylthio)-5-p-tolyl-4H-1,2,4-triazol-4-amine, C23H20N4S
  56. Crystal structure of ethyl 5-methyl-1-(pyridin-3-yl)-1H-1,2,3-triazole-4-carboxylate, C11H12N4O2
  57. Crystal structure of 5,5-difluoro-10-(4-fluorophenyl)-1,3,7,9-tetramethyl-5H-4l4,5l4-dipyrrolo[1,2-c:2′,1′-f][1,3,2]diazaborinine - a Z′ = 3 structure, C19H18B2F3N2
  58. The crystal structure of the Matrine derivative: 12-(1H-indol-1-yl)dodecahydro-1H,5H,10H-dipyrido[2,1-f:3′,2′,1′-ij][1,6]naphthyridin-10-one hydrate, C23H29N3O
  59. The crystal structure of tris(μ2-1,3-bis(4,4,4-trifluoro-3-oxido-1-(oxo)but-2-en-1-yl)phenyl-κ4O,O′:O′′,O′′′)-bis(1,2-dimethoxyethane-κ2O,O′)dilutetium(III), C50H38F18Lu2O16
  60. The crystal structure of (Z)-2-(3-(2-(4-chlorobenzoyl)hydrazono)-2-oxoindolin-1-yl) acetic acid, C17H12ClN3O4
  61. Synthesis and crystal structure of trans-tetraqua-bis(2-(((7-hydroxy-3-(4-hydroxy-3-sulfonatophenyl)-4-oxo-4H-chromen-8-yl)methyl)ammonio)acetato-κO)cobalt(II) hexahydrate, C36H48CoN2O28S2
  62. The crystal structure of N,N-dimethyl-2,6-di-p-tolylpyrimidin-4-amine, C20H21N3
  63. The crystal structure (E)-4-methyl-N′-(2-nitrobenzylidene)benzenesulfonohydrazide, C14H13N3O4S
  64. Crystal structure of catena-poly[(μ2-1,3-bis(benzimidazol-1-yl)propane κ2N:N′)-(μ2-5-methoxyisophthalato-κ2O:O′)zinc(II)] hydrate, C26H24ZnN4O6
  65. The crystal structure of (E)-N′-(quinolin-2-ylmethylene)furan-2-carbohydrazide monohydrate, C15H13N3O3
  66. Crystal structure of 2,8-diphenyl-3,7,9-trioxa-1-azaspiro[4.5]dec-1-ene, C18H17N1O3
  67. Crystal structure of diethyl 2-(4-chlorophenyl)-1,3-dioxane-5,5-dicarboxylate, C16H19ClO6
  68. Crystal structure of 1-(carboxymethyl)-1H-benzo[d][1,2,3]triazole 3-oxide, C8H7N3O3
  69. Crystal structure of (acetylacetonato-κ2O,O′)-(2-amino-6-chlorobenzoato-κO)-oxido(1,10-phenanthroline-κ2N,N′)vanadium(IV) – trichloromethane (1/1)
  70. Crystal structure of (1E,4E)-1,5-bis(4-chlorophenyl)penta-1,4-dien-3-one, C17H12Cl2O
  71. The crystal structure of trans-dibromido-bis(pyridine-κN)platinum(II), C10H10Br2N2Pt
Heruntergeladen am 25.1.2026 von https://www.degruyterbrill.com/document/doi/10.1515/ncrs-2017-0143/html
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