Startseite Crystal structure of 2-(4-(2-butyl-1,3-dioxo-2,3-dihydro-1H-benzo[de]isoquinolin-6-yl)piperazin-1-yl)-2-oxoethyldiethylcarbamodithioate, C27H34N4O3S2
Artikel Open Access

Crystal structure of 2-(4-(2-butyl-1,3-dioxo-2,3-dihydro-1H-benzo[de]isoquinolin-6-yl)piperazin-1-yl)-2-oxoethyldiethylcarbamodithioate, C27H34N4O3S2

  • Ya-Tong Liu , Lei Kang , Na-Na Li und Zhi-Yong Xing EMAIL logo
Veröffentlicht/Copyright: 2. März 2017

Abstract

C27H34N4O3S2, monoclinic, P21/c (no. 14), a = 17.7267(7) Å, b = 10.5415(5) Å, c = 14.1637(4) Å, β = 91.644(3)°, V = 2645.62(18) Å3, Z = 4, Rgt(F) = 0.0620, wRref(F2) = 0.2008, T = 293(2) K.

CCDC no.:: 1444743

The crystal structure is shown in the figure. Tables 1 and 2 contain details on crystal structure and measurement conditions and a list of the atoms including atomic coordinates and displacement parameters.

Table 1

Data collection and handling.

Crystal:Colourless block
Size:0.15 × 0.13 × 0.13 mm
Wavelength:Mo Kα radiation (0.71073 Å)
μ:2.4 cm−1
Diffractometer, scan mode:Xcalibur, φ and ω
2θmax, completeness:59.4°, >88% (>99% up to 54°)
N(hkl)measured, N(hkl)unique, Rint:13360, 6665, 0.024
Criterion for Iobs, N(hkl)gt:Iobs > 2 σ(Iobs), 4537
N(param)refined:326
Programs:CrysAlisPRO [1], SHELX [2]
Table 2

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2).

AtomxyzUiso*/Ueq
S10.38224(4)0.45334(8)0.32512(5)0.0631(2)
S20.28002(4)0.41588(9)0.48955(5)0.0723(3)
O1−0.19786(11)0.6945(2)−0.18066(15)0.0711(6)
O2−0.09858(12)1.0434(2)−0.31724(13)0.0678(6)
O30.36268(13)0.5853(3)0.15522(18)0.0968(9)
N10.41279(14)0.3055(3)0.46833(17)0.0706(7)
N2−0.14907(12)0.8718(2)−0.24754(14)0.0512(5)
N30.24424(12)0.6613(2)0.16443(14)0.0512(5)
N40.11076(10)0.73949(18)0.06570(12)0.0414(4)
C1−0.02460(11)0.8607(2)−0.11933(14)0.0351(4)
C2−0.08356(12)0.7717(2)−0.11258(15)0.0402(5)
C3−0.3908(3)1.0856(6)−0.3392(5)0.156(2)
H3A−0.42981.0855−0.38760.233*
H3B−0.36621.1668−0.33790.233*
H3C−0.41251.0696−0.27910.233*
C40.4276(4)0.3009(6)0.6384(4)0.150(2)
H4A0.41850.25270.69450.225*
H4B0.40230.38120.64210.225*
H4C0.48080.31450.63300.225*
C5−0.3348(2)0.9852(5)−0.3595(4)0.1040(13)
H5A−0.31391.0018−0.42080.125*
H5B−0.36080.9043−0.36330.125*
C60.4002(3)0.2347(5)0.5601(3)0.1112(15)
H6A0.34660.21980.56650.133*
H6B0.42500.15280.55760.133*
C7−0.27154(19)0.9742(4)−0.2888(3)0.0821(10)
H7A−0.29170.9510−0.22820.099*
H7B−0.24731.0563−0.28150.099*
C80.48247(19)0.2712(4)0.4173(3)0.0807(10)
H8A0.49600.18420.43230.097*
H8B0.47200.27620.34980.097*
C9−0.21321(17)0.8771(3)−0.3161(2)0.0665(8)
H9A−0.23680.7942−0.32020.080*
H9B−0.19470.8980−0.37790.080*
C100.5454(2)0.3526(5)0.4414(4)0.1128(15)
H10C0.58870.32620.40730.169*
H10B0.55650.34720.50800.169*
H10A0.53290.43860.42500.169*
C110.24880(14)0.7295(3)0.07532(18)0.0543(6)
H11A0.29310.70210.04230.065*
H11B0.25350.81980.08750.065*
C120.30455(15)0.5950(3)0.19828(19)0.0573(7)
C130.29535(15)0.5334(3)0.29416(18)0.0537(6)
H13A0.25390.47330.29140.064*
H13B0.28450.59740.34110.064*
C140.35968(14)0.3851(3)0.43499(18)0.0526(6)
C150.17501(14)0.6850(3)0.21453(16)0.0506(6)
H15A0.17470.77190.23690.061*
H15B0.17310.62940.26900.061*
C160.10649(14)0.6623(2)0.15107(16)0.0459(5)
H16A0.10370.57330.13400.055*
H16B0.06120.68390.18440.055*
C170.03929(11)0.8536(2)−0.05669(14)0.0352(4)
C180.17898(13)0.7046(3)0.01464(16)0.0467(5)
H18A0.18120.7536−0.04320.056*
H18B0.17680.6154−0.00220.056*
C190.08644(13)1.0479(2)−0.12457(17)0.0439(5)
H19A0.12251.1119−0.12540.053*
C20−0.07949(13)0.6812(2)−0.04260(17)0.0458(5)
H20A−0.11970.6257−0.03550.055*
C21−0.09398(14)0.9637(2)−0.25486(17)0.0475(6)
C22−0.14806(14)0.7741(2)−0.18029(17)0.0488(6)
C230.04453(12)0.7510(2)0.00950(14)0.0383(5)
C24−0.01657(13)0.6710(2)0.01758(17)0.0454(5)
H24A−0.01560.60900.06430.055*
C25−0.02942(12)0.9591(2)−0.18651(15)0.0397(5)
C260.02551(13)1.0505(2)−0.18946(16)0.0446(5)
H26A0.02221.1143−0.23470.054*
C270.09338(12)0.9520(2)−0.05973(16)0.0401(5)
H27A0.13430.9515−0.01710.048*

Source of material

2-Butyl-6-[4-(2-chloro-acetyl)-piperazin-1-yl]-benzo[de]isoquinoline-1,3-dione (211 mg, 0.510 mmol) and sodium diethyldithiocarbamate (145 mg, 0.64 mmol) were dissolved in acetonitrile (30 mL) and stirred over anhydrous KI (80 mg, 0.58 mmol) for 4 h at 303 K. After the complete consumption of the starting material monitored using TLC, the solvent was removed under vacuum to give red yellow oil. This oil was dissolved in CH2Cl2 (100 mL). The organic layer was washed with water and dried over anhydrous MgSO4. The solvent was evaporated under reduced pressure, and the crude product was purified by column chromatography, ethyl acetate-chloroform (1:2, v/v), to give the orange yellow solid (yield 82%, 220 mg). It was recrystallized from absolute alcohol to give colorless block-shaped crystals.

Experimental details

The C—H atoms were then constrained to an ideal geometry, with C—H distances of 0.93–0.98 Å. The Uiso values of the hydrogen atoms of methyl groups were set to 1.5Ueq (Cmethyl) and the Uiso values of all other.

Discussion

Fluorescent chemosensors have recently attracted significant interest due to their simplicity, high sensitivity and real-time detection for chemistry, biology, and environmental science [3, 4] . Naphthalimide fluorophores have been widely used for the development of fluorescent chemosensors owing chemical stability, large Stokes shifts, high fluorescent quantum yields and easy to modification procedures [5, 6] . In our previous work, we had synthesized a chemosensor of Al3+ [7].

The three rings of the benzo[de]isoquinolinyl moiety (cf. the figure) are almost parallel to each other. The angles between the planes of the rings are 3.5(3), 2.8(3) and 5.4(2)°, respectively. In addition, the ring of piperazine is in chair conformation which is helpful for the stability of the structure.

Acknowledgement

This work was supported by the Postdoctoral Scientific Research Developmental Fund of Heilongjiang Province (No. LBH-Q14023), the State Scholarship Fund of China Scholar Council (No. 201408230115), the Scientific Research Fund of Heilongjiang Provincial Education Department (No. 12531033).

References

1 Agilent Technologies: CrysAlisPRO Software system, version 1.171.35.21, Agilent Technologies UK Ltd, Oxford, UK, (2012).Suche in Google Scholar

2 Sheldrick, G. M.: A short history of SHELX. Acta Crystallogr. A64 (2008) 112–122.10.1107/S0108767307043930Suche in Google Scholar PubMed

3 Azadbakht, R.; Almasi, T.; Keypour, H.; Rezaeivala, M.: A new asymmetric Schiff base system as fluorescent chemosensor for Al3+ ion. Inorg. Chem. Commun. 33 (2013) 63–67.10.1016/j.inoche.2013.03.014Suche in Google Scholar

4 Azadbakht,R.; Khanabadi, J.: A highly sensitive and selective off-on fluorescent chemosensor for Al3+ based on naphthalene derivative. Inorg. Chem. Commun. 30 (2013) 21–25.10.1016/j.inoche.2013.01.009Suche in Google Scholar

5 Zhang, Z. Y.; Chen, Y. H.; Xu, D. M.; Yang, L.; Liu, A. F.: A new 1, 8-naphthalimide-based colorimetric and ”turn-on” fluorescent Hg2+ sensor. Spectrochim. Acta, Part A 105 (2013) 8–13.10.1016/j.saa.2012.11.113Suche in Google Scholar PubMed

6 Liu, Y. B.; Liu, Y. W.; Liu, W.; Liang, S. C.: Two-photon fluorescent probe derived from naphthalimide for cysteine detection and imaging in living cells. Spectrochim. Acta, Part A 137 (2015) 509–515.10.1016/j.saa.2014.08.072Suche in Google Scholar PubMed

7 Kang, L.; Xing, Z. Y.; Ma, X. Y.; Liu, Y. T.; Zhang, Y.: A highly selective colorimetric and fluorescent turn-on chemosensor for Al3+ based on naphthalimide derivative. Spectrochim. Acta, Part A 167 (2016) 59–65.10.1016/j.saa.2016.05.030Suche in Google Scholar PubMed

Received: 2016-8-23
Accepted: 2017-2-6
Published Online: 2017-3-2
Published in Print: 2017-3-1

©2017 Ya-Tong Liu et al., published by De Gruyter.

This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 3.0 License.

Artikel in diesem Heft

  1. Cover and Frontmatter
  2. The crystal structure of triphenylphosphineoxide – 2,5-dichloro-3,6-dihydroxycyclohexa-2,5-diene-1,4-dione (2/1), C42H32Cl2O6P2
  3. Crystal structure of poly-[diaqua-[bis(μ2-hydroxy)-bis(μ4-3,4,5,6-tetrachlorophthalato-κ3O,O′:O′; κ2O′′:O′′′)dilanthanum(III)], C8H3Cl4LaO6
  4. Crystal structure of 1,1′-(3,4-diphenylthieno[2,3-b]thiophene-2,5-diyl)bis[1-phenyl-methanone], C32H20O2S2
  5. Crystal structure of 4a-hydroxy-9-(3,5-dibromo-phenyl)-3,4,4a,5,6,7,9,9a-octahydro-2H-xanthene-1,8-dione, C19H18Br2O4
  6. Crystal structure of 5-hydroxy-4,6,9,10-tetramethyl-1-oxo-6-vinyldecahydro-3a,9-propanocyclopenta[8]annulen-8-yl 2-((2-methyl-1-(3-methylbenzamido)propan-2-yl)thio)acetate, C34H49NO5S
  7. Crystal structure of pyridinium bis(naphthalane-2,3-diolato-κ2O,O′)borate monohydrate, C25H20BNO5
  8. Crystal structure of 1,1′-((1E,1′E)-(((ethane-1,2-diylbis(oxy))bis(2,1-phenylene))bis(azanylylidene))bis(methanylylidene))bis(naphthalen-2-olato)nickel(II), C72H52N4O8Ni2
  9. The crystal structure of 3-(2-acetyl-4-butyramido-phenoxy)-2-hydroxy-N-isopropylpropan-1-aminium tetraphenylborate, C42H49BN2O4
  10. Crystal structure of 4-bromobenzyl (Z)-N′-(adamantan-1-yl)-4-phenylpiperazine-1-carbothioimidate, C28H34BrN3S
  11. Crystal structure of poly-[(μ6-benzene-1,2,4,5-tetracarboxylato)-(μ2-1,2-bis(imidazol-1-ylmethyl)benzene)dicobalt(II)], Co2C24H16N4O8
  12. Crystal structure of catena-(bis(μ2-1, 2-bis(imidazole-1-ylmethyl)benzene-κN:N′)-dichlororido-nickel(II)), C28H28Cl2N8Ni
  13. Crystal structure of (Z)-1-(1,5-dimethyl-1H-pyrazol-3-yl)-3-hydroxy-3-(4-methoxyphenyl)prop-2-en-1-one, C15H16N2O3
  14. Crystal structure of (Z)-1-(1,5-dimethyl-1H-pyrazol-3-yl)-3-hydroxy-3-phenylprop-2-en-1-one, C14H14N2O2
  15. Crystal structure of (E)-2-(4-hydroxy-3-methoxybenzylidene)-6-methoxy-3,4-dihydronaphthalen-1(2H)-one, C19H18O4
  16. Crystal structure of (Z)-1-(1,5-dimethyl-1H-pyrazol-3-yl)-3-(4-ethoxyphenyl)-3-hydroxyprop-2-en-1-one, C16H18N2O3
  17. Crystal structure of (Z)-1-(1,5-dimethyl-1H-pyrazol-3-yl)-3-hydroxy-3-(p-toly)prop-2-en-1-one, C15H16N2O2
  18. Crystal structure of 1-acetyl-3-(3-chlorophenyl)-5-(4-isopropylphenyl)-4,5-dihydro-(1H)-pyrazole, C20H21ClN2O
  19. The crystal structure of 1-methyl-2,4-dinitro-5-iodoimidazole, C4H3IN4O4
  20. The crystal structure of 4-chloro-3,5-dinitroaniline, C6H4ClN3O4
  21. Crystal structure of N,N-dimethyl-N′-(2-methyl-4-oxo-5,6,7,8-tetrahydrobenzo[4,5]thieno[2,3-d]pyrimidin-3(4H)-yl)formimidamide, C14H18N4OS
  22. Crystal structure of tetrakis(μ2-acetato-κ2O:O′)-bis[μ3-4-chloro-2,6-bis((methylimino)methyl)phenolato-κ2N,O:O,N′]-(μ4-oxido)tetracopper(II), C28H32Cl2Cu4N4O11
  23. Crystal structure of catena-poly[diaqua-bis(μ2-ethane-1,2-diyl-bis(pyridine-3-carboxylate-κ2N:N′))copper(II)] dinitrate, C28H28CuN6O16
  24. Synthesis and crystal structure of catena-poly[(μ2-nicotinato-κ2O,O′: κ1N)-(nitrato-κ1O)-(bis(2-benzimidazol-ylmethyl)amine-κ3N,N′,N′′)lead(II)], C22H18N7O5Pb
  25. The twinned crystal structure of (4SR)-7-benzyl-2,4,8,8-tetramethyl-7,8-dihydroimidazo[5,1-c][1,2,4]triazine-3,6(2H,4H)-dione, C16H20N4O2
  26. Crystal structure of (Z)-3-hydroxy-3-(4-methoxyphenyl)-1-(pyridin-2-yl)prop-2-en-1-one, C15H13NO3
  27. Crystal structure of 2-amino-4-(2,3-dichlorophenyl)-5-oxo-5,6,7,8-tetrahydro-4H-chromene-3-carbonitrile, C16H12Cl2N2O2
  28. Crystal structure of catena-poly[(μ2-butane-1,4-diyl-bis(pyridine-3-carboxylato-κN))silver(I)] tetrafluoroborate, C16H16AgN2O4BF4
  29. Crystal structure of poly[diaqua-(1,10-phenanthroline-κ2N,N′)-(μ2-2,5-dihydroxytere-phthalato)-bis(μ4-2,5-dihydroxyterephthalato)dicerium(III)], C24H16CeN2O10
  30. Crystal structure of 5,7,4′-trihydroxy-3,8,3′-trymethoxyflavone, C18H16O8
  31. Crystal structure of N-(3,4-dichlorobenzylidene)-4-methylaniline, C14H11Cl2N
  32. Crystal structure of 4-(3-Methoxy-phenyl)-2,7,7-trimethyl-5-oxo-1,4,5,6,7,8-hexahydro-quinoline-3-carboxylic acid ethyl ester, C22H27NO4
  33. Crystal structure of 2-amino-4-(3-fluorophenyl)-5-oxo-5,6,7,8-tetrahydro-4H-chromene-3-carbonitrile, C16H13FN2O2
  34. Crystal structure of 1,1,(3,4-dihydroxythieno[2,3-b] thiophene-2,5-diyl)bis(2-bromoethanone), C10H6Br2O4S2
  35. The crystal structure of N,N′-(4,4′-oxydibenzyl)-bisisonicotinamide 3.5 hydrate, C24H24N4O6
  36. Crystal structure of catena-poly[hexakis(μ2-chlorido)-hexakis(4-(1H-pyrazol-5-yl)pyridine-κN)tricadmium(II)], Cd3C48H42Cl6N18
  37. Crystal structure of 2-(4-(dimethylamino)phenyl)-1,3-dimethyl-1H-perimidin-3-ium iodide, C21H22I1N3
  38. Crystal structure of 4-(1,3-dimethyl-2,3-dihydro-1H-perimidin-2-yl)benzonitrile, C20H17N3
  39. Crystal structure of tetrakis(μ2-acetato-κ2O:O′)-bis(2,2′-sulfonyldipyrazine-κ1N)dicopper(II), C24H24Cu2N8O12S2
  40. Crystal structure of 1-(4-chlorophenyl)-6,8-diphenyl-1H-pyrazolo[4,3-c]quinoline, C28H18ClN3
  41. Crystal structure of methyl 3-((1-(2-(methoxycarbonyl)benzyl)-1H-1,2,3-triazol-4-yl)methoxy)-2-naphthoate, C24H21N3O5
  42. Crystal structure of (tris(2-pyridylmethyl)amine-κ4N,N′,N′′,N′′′′)-chloranilato-κO,O′-zinc(II) – methanol (1/1), C25H22Cl2N4O5Zn
  43. Crystal structure of 1,1-dimethyl-3-(4-methoxyphenyl)urea, C10H14N2O2
  44. Crystal structure of 4a-Hydroxy-9-(2-nitro-phenyl)-3,4,4a,5,6,7,9,9a-octahydro-2H-xanthene-1,8-dione, C19H19NO6
  45. Crystal structure of chlorido-(η6–1-isopropyl-4-methyl benzene)-(1-(pyridin-2-yl)-N-(p-tolyl)methanimine-κ2N,N′)ruthenium(II) hexafluorophosphate(V), C23H26ClF6N2PRu
  46. Crystal structure of phenyl(2-phenyl-2,3-dihydro-1H-perimidin-2-yl)methanone, C24H18N2O
  47. Crystal structure of (E)-3-methyl-4-((3-(5-methyl-1-phenyl-1H-1,2,3-triazol-4-yl)-1-phenyl-1H-pyrazol-4-yl)methylene)-1-phenyl-1H-pyrazol-5(4H)-one, C29H23N7O
  48. Crystal structure of 2-(4-(2-butyl-1,3-dioxo-2,3-dihydro-1H-benzo[de]isoquinolin-6-yl)piperazin-1-yl)-2-oxoethyldiethylcarbamodithioate, C27H34N4O3S2
  49. Crystal structure of poly-[diaqua-bis(μ-4,4′-bipyridine-κ2N:N′)cobalt(II)] bis(4-chlorobenzenesulfonate) – 4,4′-bipyridine – water (1/1/2), C42H40Cl2CoN6O10S2
  50. Crystal structure of (η6-benzene)-(N-(2,6-dimethylphenyl)-1-(pyridin-2-yl)methanimine-κ2N,N′)ruthenium(II) perchlorate monohydrate, C20H20Cl2N2O5Ru
  51. Crystal structure of 4,10,16,22-tetrahydroxy-6,12,18,24-tetramethoxy-2,8,14,20-tetraethylphenylresorcin[4]arene – ethyl acetate (1/1), C68H72O10
  52. Crystal structure of chlorido-(N-(2,5-dichlorophenyl)-1-(pyridin-2-yl)methanimine-κ2N,N′)(η6-1-isopropyl-4-methyl benzene) ruthenium (II) tetrafluoroborate, C22H22Cl3N2BF4Ru
  53. Crystal structure of 3-(5-methyl-1-p-tolyl-1H-1,2,3-triazol-4-yl)-1-phenyl-1H-pyrazole-4-carbaldehyde, a rare Z′ = 3 structure, C20H17N5O
  54. Crystal structure of 5-(5-(4-chlorophenyl)-1-phenyl-1H-pyrazol-3-yl)-N-phenyl-1,3,4-thiadiazol-2-amine, C23H16ClN5S
  55. Crystal structure of 7-hydroxy-3-(4-hydroxyphenyl)-4H-1-benzopyran-4-one-N,N-dimethylformamide (1/1), C18H17NO5
  56. Crystal structure of halogen-bonded 2-chloro-1,10-phenanthroline—1,4-diiodotetrafluorobenzene (2/1), C30H14Cl2F4I2N4
  57. Crystal structure of 1-(4,4-dimethyl-2,6-dithioxo-1,3,5-triazinan-1-yl)-3-(diethylaminocarbonyl)thiourea, C11H20N6OS3
  58. Crystal structure of methyl 1-(4-fluorobenzyl)-3-phenyl-1H-pyrazole-5-carboxylate, C18H15FN2O2
  59. Crystal structure of 1,1-dimethyl-3-(4-methylphenyl)urea, C10H14N2O
  60. Crystal structure of yttrium gallium antimonide, Y5Ga1.24Sb2.77
  61. Crystal structure of 2-(bis(4-methoxyphenyl)amino)-2-oxoacetic acid, C16H15NO5
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