Startseite Synthesis and crystal structure of catena-poly[(μ2-nicotinato-κ2O,O′: κ1N)-(nitrato-κ1O)-(bis(2-benzimidazol-ylmethyl)amine-κ3N,N′,N′′)lead(II)], C22H18N7O5Pb
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Synthesis and crystal structure of catena-poly[(μ2-nicotinato-κ2O,O′: κ1N)-(nitrato-κ1O)-(bis(2-benzimidazol-ylmethyl)amine-κ3N,N′,N′′)lead(II)], C22H18N7O5Pb

  • Yan-hui Jia , Fang-Fang Huang , Mei-Hong Peng und Feng-Mei Nie EMAIL logo
Veröffentlicht/Copyright: 10. Februar 2017

Abstract

C22H18N7O5Pb, triclinic, P1̅ (no. 2), a = 7.7446(17) Å, b = 16.914(3) Å, c = 17.726(3) Å, α = 72.451(6)°, β = 86.900(6)°, γ = 88.098(7)°, V = 2210.3(7) Å3, Z = 4, Rgt(F) = 0.0379, wRref(F2) = 0.0751, T = 153 K.

CCDC no.:: 1526292

The asymmetric unit of the title crystal structure is shown in the figure. Tables 1 and 2 contain details of the measurement method and a list of the atoms including atomic coordinates and displacement parameters.

Table 1

Data collection and handling.

Crystal:Colourless block
Size:0.31 × 0.28 × 0.20 mm
Wavelength:Mo Kα radiation (0.71073 Å)
μ:76.9 cm−1
Diffractometer, scan mode:AFC10, φ and ω
2θmax, completeness:58.2°, >96%
N(hkl)measured, N(hkl)unique, Rint:23726, 11446, 0.046
Criterion for Iobs, N(hkl)gt:Iobs > 2 σ(Iobs), 8547
N(param)refined:631
Programs:Crystal Clear [5], SHELX [6]
Table 2

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2).

AtomxyzUiso*/Ueq
Pb11.13829(2)0.559579(12)0.247604(12)0.01648(5)
Pb20.60615(2)1.110591(12)0.245824(11)0.01597(5)
O10.8802(5)0.6001(2)0.1807(2)0.0229(9)
O20.9863(5)0.4903(2)0.1498(2)0.0278(9)
O30.3458(5)1.1117(2)0.1848(2)0.0232(9)
O40.4460(5)1.2385(2)0.1327(2)0.0321(11)
O51.2946(5)0.5768(2)0.3945(2)0.0320(10)
O61.5056(5)0.6244(3)0.3077(3)0.0413(12)
O71.4224(6)0.6888(3)0.3926(3)0.0500(14)
O80.7804(5)1.0007(2)0.3947(2)0.0330(10)
O90.9868(5)1.0018(3)0.3057(2)0.0376(12)
O100.9093(6)0.8862(2)0.3918(2)0.0397(12)
N10.9110(6)0.6103(3)0.3380(3)0.0222(10)
N21.1365(5)0.7128(3)0.2305(3)0.0209(10)
N31.0813(5)0.8215(3)0.2692(3)0.0228(11)
H3N1.04130.85090.29980.027*
N40.9357(6)0.4485(3)0.3358(3)0.0220(10)
N50.8050(6)0.3934(3)0.4536(3)0.0272(11)
H5N0.75400.39000.50000.033*
N60.3928(6)0.5674(3)0.1079(3)0.0285(12)
N70.3852(6)1.0068(3)0.3430(3)0.0242(11)
N80.6124(5)0.9688(2)0.2335(2)0.0165(9)
N90.5658(6)0.8310(3)0.2790(3)0.0215(10)
H9N0.52840.78320.31040.026*
N100.4136(6)1.1690(3)0.3378(3)0.0214(10)
N110.2888(6)1.1559(3)0.4570(3)0.0220(10)
H11N0.23851.13230.50380.026*
N12−0.1454(6)1.1832(3)0.1103(3)0.0244(11)
N131.4107(6)0.6301(3)0.3644(3)0.0264(11)
N140.8931(6)0.9636(3)0.3639(3)0.0237(11)
C10.9510(7)0.6901(3)0.3514(3)0.0204(12)
H1A1.01570.67930.40030.024*
H1B0.84210.72000.35830.024*
C21.0562(7)0.7418(3)0.2826(3)0.0199(12)
C31.1794(7)0.8517(3)0.2001(3)0.0217(12)
C41.2410(7)0.9296(3)0.1566(4)0.0294(14)
H41.21990.97710.17410.035*
C51.3330(7)0.9340(4)0.0876(4)0.0313(15)
H51.37470.98630.05580.038*
C61.3683(7)0.8640(4)0.0619(4)0.0289(14)
H61.43360.87000.01370.035*
C71.3103(7)0.7873(3)0.1052(3)0.0234(12)
H71.33410.73990.08790.028*
C81.2160(6)0.7813(3)0.1751(3)0.0216(12)
C90.8539(7)0.5475(3)0.4112(3)0.0243(13)
H9A0.73320.55970.42610.029*
H9B0.92790.54850.45470.029*
C100.8650(7)0.4641(3)0.3992(3)0.0212(12)
C110.8387(7)0.3284(4)0.4227(3)0.0267(14)
C120.8069(8)0.2436(4)0.4518(4)0.0344(16)
H120.75090.21990.50230.041*
C130.8610(8)0.1956(4)0.4038(4)0.0364(16)
H130.84190.13760.42190.044*
C140.9424(7)0.2301(4)0.3297(4)0.0327(15)
H140.97660.19510.29820.039*
C150.9747(7)0.3142(3)0.3007(4)0.0274(14)
H151.03160.33730.25040.033*
C160.9206(7)0.3636(3)0.3483(3)0.0215(12)
C170.8652(7)0.5394(3)0.1536(3)0.0195(12)
C180.5530(7)0.5802(3)0.1257(3)0.0251(13)
H180.57420.63050.13670.030*
C190.6902(6)0.5245(3)0.1292(3)0.0158(11)
C200.6595(7)0.4507(3)0.1127(3)0.0209(12)
H200.75040.41130.11400.025*
C210.4954(7)0.4361(3)0.0946(3)0.0262(13)
H210.47050.38620.08350.031*
C220.3683(7)0.4952(4)0.0928(3)0.0258(13)
H220.25550.48450.08010.031*
C230.4287(7)0.9192(3)0.3580(3)0.0220(12)
H23A0.32130.88700.36590.026*
H23B0.49390.89910.40690.026*
C240.5360(6)0.9065(3)0.2894(3)0.0197(12)
C250.6670(7)0.8433(3)0.2092(3)0.0190(12)
C260.7337(7)0.7899(3)0.1693(4)0.0276(14)
H260.71490.73190.18910.033*
C270.8275(7)0.8232(4)0.1003(4)0.0288(14)
H270.87530.78770.07170.035*
C280.8552(7)0.9089(4)0.0707(3)0.0256(13)
H280.92020.93010.02210.031*
C290.7903(7)0.9630(3)0.1104(3)0.0229(12)
H290.80931.02100.09030.028*
C300.6950(6)0.9286(3)0.1819(3)0.0184(11)
C310.3227(8)1.0277(3)0.4134(3)0.0272(13)
H31A0.38940.99550.45920.033*
H31B0.19961.01250.42520.033*
C320.3408(7)1.1183(3)0.4019(3)0.0205(12)
C330.3303(7)1.2392(4)0.4251(3)0.0242(13)
C340.3118(8)1.3068(4)0.4551(4)0.0292(14)
H340.25811.30160.50580.035*
C350.3755(8)1.3817(4)0.4071(4)0.0328(15)
H350.36701.42900.42550.039*
C360.4517(8)1.3890(4)0.3325(4)0.0322(15)
H360.49231.44150.30080.039*
C370.4700(7)1.3227(3)0.3034(3)0.0270(13)
H370.52161.32890.25210.032*
C380.4110(7)1.2460(3)0.3507(3)0.0221(12)
C390.3284(7)1.1876(3)0.1434(3)0.0208(12)
C400.0146(7)1.1620(3)0.1341(3)0.0199(12)
H400.03401.10790.16920.024*
C410.1546(6)1.2146(3)0.1103(3)0.0166(11)
C420.1253(7)1.2925(3)0.0570(3)0.0211(12)
H420.21741.33030.03890.025*
C43−0.0387(7)1.3141(3)0.0309(3)0.0223(12)
H43−0.06091.3665−0.00660.027*
C44−0.1698(7)1.2587(3)0.0599(3)0.0237(12)
H44−0.28351.27500.04320.028*

Source of material

An ethanol (15 mL) solution of bis(2-benzimidazol-ylmethyl)amine (bbma, 0.055 g, 0.2 mmol) was added to a aqueous (10 mL) solution of Pb(NO3)2 (0.066 g, 0.2 mmol). An ethanol (25 mL) solution of sodium nicotinate (0.030 g, 0.2 mmol) was added to the resulting solution slowly. The mixture was stirred for 6 h and then filtered. Colorless crystals were obtained by slow evaporation of the filtrate after 14 days.

Experimental details

The crystal structures were solved by direct methods using the SHELXS program of the SHELXTL crystallographic software package (AFIX 137 option of the SHELXL-97 program). Non-hydrogen atoms were refined with anisotropic displacement parameters. The hydrogen atoms of organic ligands were generated geometrically and refined isotropically.

Discussion

Pb2+ as a heavy p-block metal ion has unique lone pair electron effects (with ns2np0 configuration), such as a large radius and flexible coordination [1]. The lead(II) complexes with multi-functional organic ligands have attracted considerable attention. Bis(benzimidazol-2-yl-methyl)amine (bbma) is a linear tridentate ligand with two aromatic benzimidazole side arms. It is widely used to prepare metal complexes. Some transition metal complexes of it have been studied. They exhibite mononuclear, dinuclear, trinuclear and 1-D structural features [2], [3], [4]. A new Pb(II) complex containing bis(benzimidazol-2-yl-methyl)amine (bbma) and nicotinate were synthesized and structurally characterized with the formula [Pb(bbma)(nic)(NO3)].

In the title complex, both crystallographically independent Pb(II) ions are seven-coordinated showing a N4O3 donor set with three N atoms from bbma, one nicotinate N atom and two O atoms from another nicotinate, and one O atom (O5) from nitrate anion (cf. the figure). Bbma as a tridentate ligand coordinates to Pb(II) with its two side arms nearly coplanar.

The nicotinate offers two carboxylate O atoms in bidentate chelating mode. The coordination geometry of Pb(II) can be described as a distorted square bipyramid geometry with the center of the chelating carboxylate oxygens O1 and O2 (O3 and O4) occupying one of the bipyramid axial vertices. The O atom (O5/O8) of nitrato ligand occupying another axial vertice. Each nicotinate ligand exhibits a bidentate chelating mode with two obviously different Pb1—O (primary) distances. d(Pb1 − O1) = 2.355(4) Å is shorter than d(Pb1 − O2) = 2.702(4) Å, suggesting one oxygen atom is strongly coordinated to the metal ion while the other is weaker. Of the three Pb1—O distances, Pb1—O5 of nitrate anion is the longest [d(Pb1 − O5) = 3.025(4) Å]. The equatorial plane is defined by two benzimidazolic-N1, N2 atoms of bbma, the amino nitrogen atom N4 and N6 atom of nicotinate. As shown in the figure, of the four Pb1—N (primary) distances, two N atoms from two aromatic benzimidazole side arms are nearly equal [d(Pb1 − N4) = 2.568(5) Å, d(Pb1 − N2) = 2.516(5) Å], while the amino nitrogen atom is slightly longer [d(Pb1 − N1) = 2.613(5) Å], Pb1 − N6 of nicotinate is the longest [d(Pb1 − N6) = 3.054(5) Å]. The distortion in the coordination conditions is reflected in the average bite angles of two carboxylate oxygen atoms O2—Pb1—O5 and O1—Pb1—O5 to be 148°. The equatorial bond angels are from 64.1(2)° to 134.5(1)° and the total is 359°, the O5—Pb1—N1, O5—Pb1—N2, O5—Pb1—N6 bite angles are 67.8(1)°, 74.5(1)°, 115.6(1)° respectively. The coordination geometry of the Pb2 atom is very similar. Adjacent complexes are linked by the weak interactions between nicotinate N atom (N6/N12) with Pb1/Pb2 to form one-dimensional chain structures. The adjacent 1D linear chains are also connected by intermolecular hydrogen bonds through benzimidazole NH of bbma and the oxygen atom of nitrate anion to form a 2D layer structure.

Acknowledgement

This study was supported by Scientific Research Base Development Program of the Beijing Municipal Commission of Education.

References

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Received: 2016-7-14
Accepted: 2017-1-10
Published Online: 2017-2-10
Published in Print: 2017-3-1

©2017 Yan-hui Jia et al., published by De Gruyter.

This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 3.0 License.

Artikel in diesem Heft

  1. Cover and Frontmatter
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  3. Crystal structure of poly-[diaqua-[bis(μ2-hydroxy)-bis(μ4-3,4,5,6-tetrachlorophthalato-κ3O,O′:O′; κ2O′′:O′′′)dilanthanum(III)], C8H3Cl4LaO6
  4. Crystal structure of 1,1′-(3,4-diphenylthieno[2,3-b]thiophene-2,5-diyl)bis[1-phenyl-methanone], C32H20O2S2
  5. Crystal structure of 4a-hydroxy-9-(3,5-dibromo-phenyl)-3,4,4a,5,6,7,9,9a-octahydro-2H-xanthene-1,8-dione, C19H18Br2O4
  6. Crystal structure of 5-hydroxy-4,6,9,10-tetramethyl-1-oxo-6-vinyldecahydro-3a,9-propanocyclopenta[8]annulen-8-yl 2-((2-methyl-1-(3-methylbenzamido)propan-2-yl)thio)acetate, C34H49NO5S
  7. Crystal structure of pyridinium bis(naphthalane-2,3-diolato-κ2O,O′)borate monohydrate, C25H20BNO5
  8. Crystal structure of 1,1′-((1E,1′E)-(((ethane-1,2-diylbis(oxy))bis(2,1-phenylene))bis(azanylylidene))bis(methanylylidene))bis(naphthalen-2-olato)nickel(II), C72H52N4O8Ni2
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  13. Crystal structure of (Z)-1-(1,5-dimethyl-1H-pyrazol-3-yl)-3-hydroxy-3-(4-methoxyphenyl)prop-2-en-1-one, C15H16N2O3
  14. Crystal structure of (Z)-1-(1,5-dimethyl-1H-pyrazol-3-yl)-3-hydroxy-3-phenylprop-2-en-1-one, C14H14N2O2
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  17. Crystal structure of (Z)-1-(1,5-dimethyl-1H-pyrazol-3-yl)-3-hydroxy-3-(p-toly)prop-2-en-1-one, C15H16N2O2
  18. Crystal structure of 1-acetyl-3-(3-chlorophenyl)-5-(4-isopropylphenyl)-4,5-dihydro-(1H)-pyrazole, C20H21ClN2O
  19. The crystal structure of 1-methyl-2,4-dinitro-5-iodoimidazole, C4H3IN4O4
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  25. The twinned crystal structure of (4SR)-7-benzyl-2,4,8,8-tetramethyl-7,8-dihydroimidazo[5,1-c][1,2,4]triazine-3,6(2H,4H)-dione, C16H20N4O2
  26. Crystal structure of (Z)-3-hydroxy-3-(4-methoxyphenyl)-1-(pyridin-2-yl)prop-2-en-1-one, C15H13NO3
  27. Crystal structure of 2-amino-4-(2,3-dichlorophenyl)-5-oxo-5,6,7,8-tetrahydro-4H-chromene-3-carbonitrile, C16H12Cl2N2O2
  28. Crystal structure of catena-poly[(μ2-butane-1,4-diyl-bis(pyridine-3-carboxylato-κN))silver(I)] tetrafluoroborate, C16H16AgN2O4BF4
  29. Crystal structure of poly[diaqua-(1,10-phenanthroline-κ2N,N′)-(μ2-2,5-dihydroxytere-phthalato)-bis(μ4-2,5-dihydroxyterephthalato)dicerium(III)], C24H16CeN2O10
  30. Crystal structure of 5,7,4′-trihydroxy-3,8,3′-trymethoxyflavone, C18H16O8
  31. Crystal structure of N-(3,4-dichlorobenzylidene)-4-methylaniline, C14H11Cl2N
  32. Crystal structure of 4-(3-Methoxy-phenyl)-2,7,7-trimethyl-5-oxo-1,4,5,6,7,8-hexahydro-quinoline-3-carboxylic acid ethyl ester, C22H27NO4
  33. Crystal structure of 2-amino-4-(3-fluorophenyl)-5-oxo-5,6,7,8-tetrahydro-4H-chromene-3-carbonitrile, C16H13FN2O2
  34. Crystal structure of 1,1,(3,4-dihydroxythieno[2,3-b] thiophene-2,5-diyl)bis(2-bromoethanone), C10H6Br2O4S2
  35. The crystal structure of N,N′-(4,4′-oxydibenzyl)-bisisonicotinamide 3.5 hydrate, C24H24N4O6
  36. Crystal structure of catena-poly[hexakis(μ2-chlorido)-hexakis(4-(1H-pyrazol-5-yl)pyridine-κN)tricadmium(II)], Cd3C48H42Cl6N18
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  38. Crystal structure of 4-(1,3-dimethyl-2,3-dihydro-1H-perimidin-2-yl)benzonitrile, C20H17N3
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  40. Crystal structure of 1-(4-chlorophenyl)-6,8-diphenyl-1H-pyrazolo[4,3-c]quinoline, C28H18ClN3
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  42. Crystal structure of (tris(2-pyridylmethyl)amine-κ4N,N′,N′′,N′′′′)-chloranilato-κO,O′-zinc(II) – methanol (1/1), C25H22Cl2N4O5Zn
  43. Crystal structure of 1,1-dimethyl-3-(4-methoxyphenyl)urea, C10H14N2O2
  44. Crystal structure of 4a-Hydroxy-9-(2-nitro-phenyl)-3,4,4a,5,6,7,9,9a-octahydro-2H-xanthene-1,8-dione, C19H19NO6
  45. Crystal structure of chlorido-(η6–1-isopropyl-4-methyl benzene)-(1-(pyridin-2-yl)-N-(p-tolyl)methanimine-κ2N,N′)ruthenium(II) hexafluorophosphate(V), C23H26ClF6N2PRu
  46. Crystal structure of phenyl(2-phenyl-2,3-dihydro-1H-perimidin-2-yl)methanone, C24H18N2O
  47. Crystal structure of (E)-3-methyl-4-((3-(5-methyl-1-phenyl-1H-1,2,3-triazol-4-yl)-1-phenyl-1H-pyrazol-4-yl)methylene)-1-phenyl-1H-pyrazol-5(4H)-one, C29H23N7O
  48. Crystal structure of 2-(4-(2-butyl-1,3-dioxo-2,3-dihydro-1H-benzo[de]isoquinolin-6-yl)piperazin-1-yl)-2-oxoethyldiethylcarbamodithioate, C27H34N4O3S2
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  50. Crystal structure of (η6-benzene)-(N-(2,6-dimethylphenyl)-1-(pyridin-2-yl)methanimine-κ2N,N′)ruthenium(II) perchlorate monohydrate, C20H20Cl2N2O5Ru
  51. Crystal structure of 4,10,16,22-tetrahydroxy-6,12,18,24-tetramethoxy-2,8,14,20-tetraethylphenylresorcin[4]arene – ethyl acetate (1/1), C68H72O10
  52. Crystal structure of chlorido-(N-(2,5-dichlorophenyl)-1-(pyridin-2-yl)methanimine-κ2N,N′)(η6-1-isopropyl-4-methyl benzene) ruthenium (II) tetrafluoroborate, C22H22Cl3N2BF4Ru
  53. Crystal structure of 3-(5-methyl-1-p-tolyl-1H-1,2,3-triazol-4-yl)-1-phenyl-1H-pyrazole-4-carbaldehyde, a rare Z′ = 3 structure, C20H17N5O
  54. Crystal structure of 5-(5-(4-chlorophenyl)-1-phenyl-1H-pyrazol-3-yl)-N-phenyl-1,3,4-thiadiazol-2-amine, C23H16ClN5S
  55. Crystal structure of 7-hydroxy-3-(4-hydroxyphenyl)-4H-1-benzopyran-4-one-N,N-dimethylformamide (1/1), C18H17NO5
  56. Crystal structure of halogen-bonded 2-chloro-1,10-phenanthroline—1,4-diiodotetrafluorobenzene (2/1), C30H14Cl2F4I2N4
  57. Crystal structure of 1-(4,4-dimethyl-2,6-dithioxo-1,3,5-triazinan-1-yl)-3-(diethylaminocarbonyl)thiourea, C11H20N6OS3
  58. Crystal structure of methyl 1-(4-fluorobenzyl)-3-phenyl-1H-pyrazole-5-carboxylate, C18H15FN2O2
  59. Crystal structure of 1,1-dimethyl-3-(4-methylphenyl)urea, C10H14N2O
  60. Crystal structure of yttrium gallium antimonide, Y5Ga1.24Sb2.77
  61. Crystal structure of 2-(bis(4-methoxyphenyl)amino)-2-oxoacetic acid, C16H15NO5
Heruntergeladen am 7.9.2025 von https://www.degruyterbrill.com/document/doi/10.1515/ncrs-2016-0217/html
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