Home Crystal structure of methyl 3-((1-(2-(methoxycarbonyl)benzyl)-1H-1,2,3-triazol-4-yl)methoxy)-2-naphthoate, C24H21N3O5
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Crystal structure of methyl 3-((1-(2-(methoxycarbonyl)benzyl)-1H-1,2,3-triazol-4-yl)methoxy)-2-naphthoate, C24H21N3O5

  • Xiaoli Tan , Wei Hong EMAIL logo , Meiyi Wang and Hao Wang EMAIL logo
Published/Copyright: March 2, 2017

Abstract

C24H21N3O5, monoclinic, P21/n (no. 14), a = 5.8731(6) Å, b = 12.4675(10) Å, c = 28.912(3) Å, β = 90.271(7)°, V = 2117.0(3)Å3, Z = 4, Rgt(F) = 0.0797, wRref(F2) = 0.1733, T = 293.23(10) K.

CCDC no.:: 1493972

The crystal structure is shown in the figure. Tables 1 and 2 contain details on crystal structure and measurement conditions and a list of the atoms including atomic coordinates and displacement parameters.

Table 1

Data collection and handling.

Crystal:Colourless block
Size:0.21 × 0.17 × 0.14 mm
Wavelength:Mo Kα radiation (0.71073 Å)
μ:1.0 cm−1
Diffractometer, scan mode:SuperNova, ω-scans
2θmax, completeness:52°, >99%
N(hkl)measured, N(hkl)unique, Rint:7894, 4175, 0.065
Criterion for Iobs, N(hkl)gt:Iobs > 2 σ(Iobs), 1691
N(param)refined:291
Programs:CrysAlis [7], SHELX [8], OLEX2 [9]
Table 2

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2).

AtomxyzUiso*/Ueq
O10.3280(6)0.0699(3)0.10043(12)0.0723(11)
O20.6888(5)0.0892(2)0.07974(11)0.0643(9)
O30.7194(5)0.2874(2)0.04533(10)0.0526(8)
O41.7567(7)0.2237(3)0.20920(13)0.0988(15)
O51.7817(6)0.2529(3)0.28410(12)0.0878(12)
N11.1935(6)0.4664(3)0.06565(13)0.0556(10)
N21.3469(6)0.4501(3)0.09827(14)0.0590(11)
N31.2827(6)0.3604(3)0.12074(12)0.0512(10)
C10.4100(7)0.1698(3)0.03266(15)0.0447(11)
C20.2185(7)0.1419(3)0.00837(14)0.0488(12)
H20.13000.08530.01910.059*
C30.1503(7)0.1958(3)−0.03227(16)0.0490(12)
C4−0.0488(8)0.1677(3)−0.05728(16)0.0591(14)
H4−0.13950.1116−0.04700.071*
C5−0.1088(9)0.2222(4)−0.09632(17)0.0654(15)
H5−0.24110.2040−0.11230.079*
C60.0291(8)0.3058(4)−0.11228(17)0.0646(14)
H6−0.01120.3418−0.13930.077*
C70.2224(8)0.3355(3)−0.08892(16)0.0612(14)
H70.31250.3908−0.10020.073*
C80.2851(7)0.2825(3)−0.04790(15)0.0457(11)
C90.4791(7)0.3148(3)−0.02184(14)0.0461(11)
H90.56510.3734−0.03130.055*
C100.5391(7)0.2595(3)0.01732(15)0.0459(11)
C110.8407(7)0.3826(3)0.03432(15)0.0486(12)
H11A0.74280.44490.03720.058*
H11B0.89750.37940.00290.058*
C121.0328(7)0.3885(3)0.06798(15)0.0452(11)
C131.0878(7)0.3212(3)0.10318(14)0.0482(12)
H131.00790.26100.11300.058*
C141.4242(8)0.3197(3)0.15869(15)0.0596(14)
H14A1.58280.33420.15190.071*
H14B1.40580.24250.16060.071*
C151.3662(7)0.3689(3)0.20507(16)0.0504(12)
C161.4966(8)0.3462(3)0.24503(16)0.0521(12)
C171.4378(9)0.3940(4)0.28658(16)0.0662(14)
H171.52510.37950.31280.079*
C181.2559(9)0.4617(4)0.29033(18)0.0752(16)
H181.21990.49250.31870.090*
C191.1262(9)0.4838(4)0.25163(18)0.0714(15)
H191.00070.52900.25390.086*
C201.1823(8)0.4389(4)0.20964(17)0.0619(14)
H201.09530.45580.18370.074*
C210.4668(8)0.1048(3)0.07396(17)0.0510(12)
C220.7543(8)0.0270(4)0.12022(15)0.0681(15)
H22A0.6930−0.04420.11770.102*
H22B0.69570.06080.14750.102*
H22C0.91730.02330.12220.102*
C231.6885(8)0.2682(4)0.24267(19)0.0569(13)
C241.9697(9)0.1777(4)0.28644(19)0.097(2)
H24A2.08210.19680.26390.145*
H24B1.91490.10660.28020.145*
H24C2.03680.17990.31680.145*

Source of material

Methyl 2-(azidomethyl)benzoate (200 mg, 1.05 mmol) and methyl 3-(prop-2-yn-1-yloxy)-2-naphthoate (250 mg, 1.05 mmol) were added to tert-butanol: water = 10 mL: 10 mL, then CuSO4⋅5H2O (50 mg, 0.21 mmol) and VcNa (100 mg, 0.5 2 mmol) were added. The mixture was stirred at room temperature for 15 h. The solution was diluted with water and extracted with ethyl acetate. The organic layer was washed with water and dried over Na2SO4. After being filtered and concentrated, the residue was purified by silica gel column chromatography, eluted with ethyl acetate and petroleum ether (1:1, v/v) to give a white solid (yield 54%, 250 mg); m.p. 133.6–133.7 °C; 1H-NMR (400 MHz, CDCl3) d 8.32 (s, 1H, Ar-H), 8.04 (dd, J = 8.0, 1H, Ar-H), 7.87 (s, 1H, Ar-H), 7.78 (m, 2H, Ar-H), 7.45 (m, 4H, Ar-H), 7.36 (s, 1H, Ar-H), 7.11 (m, 1H, Ar-H), 5.99 (s, 2H, CH2), 5.42 (s, 2H, CH2), 3.91 (d, J = 8.0, 6H, CH3). Single crystals of the title compound were obtained from dichloromethane.

Experimental details

All H-atoms were placed in calculated positions and treated as riding: C—H = 0.93–0.97 Å, with Uiso = 1.2 or 1.5Ueq(parent C-atom).

Discussion

1,2,3-Triazole is an important five-membered nitrogen-containing heterocyclic compound [1] and is a structure in a vast array of relevant compounds in distinct research areas such as crop protection, medicinal chemistry [2], and material sciences [3], because of its high metabolic stability, hydrogen-bonding capability, and amide bioequivalence [4, 5] . The alkyl substitution of function group at N(1) position of 1,2,3-triazole derivatives is attracting the attention of chemists [6]. In current study a number of alkyl-substituted 1,2,3-triazole derivatives in N(1) position were synthesized, which were used for the development of LPAR3 (Lysophosphatidic acid receptor 3) antagonist. Moreover, the crystal structure of these molecules were attempted to solve in order to gain the better understanding the binding pose of these molecules and LPAR3 in detail.

The crystal structure reveals that the triazole ring connects the benzyl and the naphthoate moiety. The dihedral angle between the triazole and the naphthyl moiety is 6.8°. The dihedral angle between triazole and benzyl moiety is 89.3°. In the crystal structure intermolecular π-π interactions and C—H⋯π interactions play a role in the molecular packing. The bond lengths and angles derived from the title structure are within normal ranges.

Acknowledgement

This work was supported by the National Natural Science Foundation of China (No. 81460538, 21262001). The authors would also like to thank Dr. Qingfeng Yang for the help with the analysis of the crystal structure data and Dr. Yongliang Shao for the help with the crystallization experiments.

References

1 Chen, Z.; Yan, Q.; Yi, H.; Liu, Z.; Lei, A.; Zhang, Y.: Efficient synthesis of 1,2,3-triazoles by copper-mediated C-N and N-N bond formation starting from N-tosylhydrazones and amines. Chem. Eur. J. 20 (2014) 13692–13694.10.1002/chem.201403515Search in Google Scholar PubMed

2 Irastorza, A.; Aizpurua, J. M.; Correa, A.: Triazole-directed Pd-catalyzed C(sp2)-H oxygenation of arenes and alkenes. Org. Lett. 18 (2016) 1080–1081.10.1021/acs.orglett.6b00195Search in Google Scholar PubMed

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Received: 2016-8-18
Accepted: 2017-1-30
Published Online: 2017-3-2
Published in Print: 2017-3-1

©2017 Hao Wang et al., published by De Gruyter.

This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 3.0 License.

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