Home Crystal structure of bis(2-((E)-5-chloro-2-hydroxybenzylidene)hydrazineyl)methaniminium trifluoroacetate dihydrate, C34H36Cl4N10O12
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Crystal structure of bis(2-((E)-5-chloro-2-hydroxybenzylidene)hydrazineyl)methaniminium trifluoroacetate dihydrate, C34H36Cl4N10O12

  • Ze-Sen Jin ORCID logo , Xiao-jing Liu ORCID logo , E. Liu , Tongling Liang and Fangfang Jian EMAIL logo
Published/Copyright: August 2, 2021

Abstract

C34H36Cl4N10O12, triclinic, P 1 (no. 2), a = 10.3071(3) Å, b = 13.4696(4) Å, c = 16.1893(4) Å, α = 81.467(2)°, β = 77.726(2)°, γ = 82.055(2)°, V = 2158.64(11) Å3, Z = 2, R gt (F) = 0.0539, wR ref (F 2) = 0.1609, T = 170 K.

CCDC no.: 2082670

Table 1 contains crystallographic data and Table 2 contains the list of the atoms including atomic coordinates and displacement parameters.

Table 1:

Data collection and handling.

Crystal: Yellow block
Size: 0.17 × 0.13 × 0.12 mm
Wavelength: Cu Kα radiation (1.54184 Å)
μ: 3.37 mm−1
Diffractometer, scan mode: XtaLAB Synergy R, ω
θ max, completeness: 75.5°, >99%
N(hkl)measured, N(hkl)unique, R int: 28,700, 8586, 0.030
Criterion for I obs, N(hkl)gt: I obs > 2σ(I obs), 7352
N(param)refined: 633
Programs: CrysAlis PRO [1], shelx [2], olex2 [3]
Table 2:

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2).

Atom x y z U iso*/U eq
Cl1 −0.05533 (10) 0.33439 (6) 0.37696 (5) 0.0661 (2)
Cl2 0.14210 (7) 1.26659 (5) −0.34515 (4) 0.04321 (17)
O1 0.3043 (2) 0.62940 (15) 0.38860 (12) 0.0504 (5)
H1 0.333580 0.617187 0.432774 0.076*
O2 −0.0586 (2) 0.88453 (14) −0.18364 (11) 0.0430 (4)
H2 −0.031111 0.863916 −0.139548 0.065*
N1 0.12845 (19) 0.66670 (14) 0.18500 (11) 0.0302 (4)
N2 0.16555 (19) 0.74812 (14) 0.12622 (11) 0.0315 (4)
H2A 0.232408 0.778377 0.129051 0.038*
N3 0.0020 (2) 0.72751 (15) 0.05418 (12) 0.0340 (4)
H3A −0.041282 0.748089 0.013808 0.041*
H3B −0.015719 0.673196 0.087653 0.041*
N4 0.12725 (19) 0.86369 (14) 0.01494 (11) 0.0303 (4)
H4 0.181767 0.899164 0.027694 0.036*
N5 0.07320 (19) 0.89460 (14) −0.05701 (11) 0.0298 (4)
C1 0.0520 (3) 0.42164 (19) 0.37996 (16) 0.0398 (5)
C2 0.1145 (3) 0.4123 (2) 0.44901 (16) 0.0430 (6)
H2B 0.098845 0.359706 0.492841 0.052*
C3 0.1990 (3) 0.4806 (2) 0.45245 (15) 0.0406 (6)
H3 0.240857 0.474352 0.498814 0.049*
C4 0.2232 (3) 0.55987 (19) 0.38667 (15) 0.0370 (5)
C5 0.1621 (2) 0.56839 (17) 0.31608 (14) 0.0317 (5)
C6 0.0749 (2) 0.49875 (18) 0.31357 (14) 0.0356 (5)
H6 0.032434 0.504091 0.267583 0.043*
C7 0.1904 (2) 0.65063 (17) 0.24722 (14) 0.0325 (5)
H7 0.254656 0.692112 0.248668 0.039*
C8 0.0951 (2) 0.77892 (16) 0.06471 (13) 0.0284 (4)
C9 0.1150 (2) 0.97549 (16) −0.10113 (13) 0.0293 (4)
H9 0.175378 1.007361 −0.081872 0.035*
C10 0.0721 (2) 1.01930 (17) −0.17971 (13) 0.0298 (4)
C11 0.1193 (2) 1.11005 (17) −0.22061 (14) 0.0318 (5)
H11 0.177857 1.139608 −0.197751 0.038*
C12 0.0797 (2) 1.15596 (18) −0.29444 (14) 0.0350 (5)
C13 −0.0083 (3) 1.1138 (2) −0.32933 (15) 0.0413 (6)
H13 −0.035914 1.145922 −0.378597 0.050*
C14 −0.0545 (3) 1.0235 (2) −0.29023 (16) 0.0435 (6)
H14 −0.113802 0.995202 −0.313421 0.052*
C15 −0.0137 (2) 0.97451 (19) −0.21672 (14) 0.0345 (5)
Cl1A 0.86785 (9) 1.10630 (6) 0.47209 (5) 0.0644 (2)
Cl2A 0.64381 (7) 0.18672 (5) 1.20335 (4) 0.04497 (17)
O1A 0.5085 (2) 0.81325 (15) 0.45436 (13) 0.0521 (5)
H1A 0.467667 0.832969 0.415630 0.078*
O2A 0.86160 (19) 0.55755 (13) 1.02652 (12) 0.0426 (4)
H2AA 0.825472 0.581364 0.986355 0.064*
N1A 0.6830 (2) 0.76981 (15) 0.65886 (12) 0.0342 (4)
N2A 0.6516 (2) 0.68375 (15) 0.71339 (12) 0.0352 (4)
H2AB 0.605857 0.641864 0.700136 0.042*
N3A 0.7739 (2) 0.72526 (16) 0.80528 (13) 0.0395 (5)
H3AA 0.800238 0.775575 0.769243 0.047*
H3AB 0.799824 0.712970 0.853246 0.047*
N4A 0.6527 (2) 0.58653 (15) 0.84019 (12) 0.0345 (4)
H4A 0.593090 0.554086 0.829610 0.041*
N5A 0.7067 (2) 0.55601 (14) 0.91194 (11) 0.0316 (4)
C1A 0.7602 (3) 1.0183 (2) 0.46772 (17) 0.0447 (6)
C2A 0.6945 (3) 1.0323 (2) 0.40016 (16) 0.0460 (6)
H2AC 0.707172 1.087641 0.358648 0.055*
C3A 0.6104 (3) 0.9639 (2) 0.39486 (15) 0.0431 (6)
H3AC 0.566273 0.972849 0.349382 0.052*
C4A 0.5906 (3) 0.88072 (19) 0.45724 (15) 0.0385 (5)
C5A 0.6574 (3) 0.86759 (19) 0.52585 (14) 0.0369 (5)
C6A 0.7432 (3) 0.9371 (2) 0.53007 (15) 0.0409 (6)
H6A 0.788777 0.928783 0.574837 0.049*
C7A 0.6336 (3) 0.78105 (19) 0.59150 (15) 0.0380 (5)
H7A 0.581489 0.733235 0.584011 0.046*
C8A 0.6939 (2) 0.66707 (17) 0.78704 (14) 0.0317 (5)
C9A 0.6667 (2) 0.47441 (17) 0.95583 (14) 0.0321 (5)
H9A 0.604119 0.443120 0.938191 0.039*
C10A 0.7162 (2) 0.42932 (17) 1.03222 (13) 0.0304 (4)
C11A 0.6661 (2) 0.34053 (17) 1.07574 (14) 0.0328 (5)
H11A 0.601869 0.313081 1.056275 0.039*
C12A 0.7117 (2) 0.29395 (18) 1.14721 (15) 0.0358 (5)
C13A 0.8109 (3) 0.3317 (2) 1.17592 (15) 0.0407 (5)
H13A 0.842800 0.298549 1.223452 0.049*
C14A 0.8613 (3) 0.4187 (2) 1.13319 (16) 0.0413 (6)
H14A 0.928559 0.443606 1.151652 0.050*
C15A 0.8129 (2) 0.46981 (18) 1.06268 (15) 0.0345 (5)
F1 0.47681 (19) 1.09688 (13) 0.07935 (12) 0.0594 (5)
F2 0.3957 (2) 1.05030 (16) 0.21052 (12) 0.0675 (5)
F3 0.56648 (18) 0.96438 (14) 0.14418 (14) 0.0675 (5)
O3 0.35856 (19) 0.86359 (14) 0.14786 (13) 0.0463 (4)
O4 0.28491 (19) 0.99482 (13) 0.06061 (11) 0.0420 (4)
C16 0.3551 (2) 0.95224 (18) 0.11146 (15) 0.0355 (5)
C17 0.4502 (3) 1.0172 (2) 0.13598 (17) 0.0427 (6)
F1Aa 0.2742 (10) 0.4634 (6) 0.6658 (7) 0.091 (3)
F2Aa 0.4168 (6) 0.3360 (8) 0.6865 (8) 0.096 (3)
F3Aa 0.2720 (8) 0.3850 (6) 0.7859 (3) 0.074 (2)
O3A 0.49305 (19) 0.45855 (14) 0.80113 (11) 0.0421 (4)
O4A 0.4722 (2) 0.56097 (14) 0.68117 (11) 0.0443 (4)
C16A 0.4501 (3) 0.48571 (19) 0.73381 (15) 0.0375 (5)
C17A 0.3566 (3) 0.4142 (2) 0.71528 (17) 0.0430 (6)
O5 0.3568 (3) 0.83840 (18) 0.33704 (14) 0.0655 (6)
H5A 0.333023 0.779206 0.350328 0.098*
H5B 0.371613 0.847176 0.282908 0.098*
O6 0.4274 (5) 0.6164 (3) 0.5145 (2) 0.1205 (16)
H6B 0.420793 0.578805 0.561957 0.181*
H6C 0.457248 0.668912 0.523276 0.181*
O7 0.4485 (2) 0.29175 (15) 0.92910 (12) 0.0472 (4)
H7B 0.434924 0.339481 0.890105 0.071*
H7C 0.497284 0.245631 0.902656 0.071*
O8 0.22076 (16) 0.21592 (13) 1.02692 (10) 0.0364 (4)
H8A 0.288524 0.235935 0.991673 0.055*
H8B 0.242274 0.153155 1.039693 0.055*
F1Bb 0.3559 (16) 0.4219 (8) 0.6330 (5) 0.082 (4)
F2Bb 0.4121 (12) 0.3187 (7) 0.7278 (7) 0.076 (3)
F3Bb 0.2436 (10) 0.4172 (12) 0.7605 (11) 0.105 (5)
  1. aOccupancy: 0.578 (16), bOccupancy: 0.422 (16).

Source of material

5-Chlorosalicylaldehyde (3.12 g, 0.02 mol) was placed in 15 mL ethanol at room temperature, added into N,N′-diaminoguanidine hydrochloride (1.25 g, 0.01 mol) solution containing 10 mL water and 8 mL ethanol, then dripped TFA (1.14 g), heated and stirred for 4 h, cooled to room temperature, then the precipitate was removed, and the filtrate was left standing to precipitate light yellow crystals.

Experimental details

Hydrogen atoms were placed in their geometrically idealized positions and constrained to ride on their parent atoms.

Comment

Schiff bases, especially aromatic Schiff bases, are widely used as catalysts for acetaldehyde polymerization and oxidation of ascorbic acid and cysteine [4], as stabilizers for gasoline [5], as antiviral and antibacterial bioactive agents, and as modifiers for polymerization reaction [6]. In recent years, it has also obtained important applications in the field of materials [7]. At the same time, it is also an important ligand in organic synthesis [8]. The asymmetric unit of the crystal structure of the title compound is shown in the Figure. The cationic Schiff bases, the trifluoro acetate anions and the water molecules are linked by hydrogen bonds. The bond lengths and angles range in a regular distance [9, 10].


Corresponding author: Fangfang Jian, School of Chemical Engineering and Pharmaceutics, Henan University of Science and Technology, Luoyang Hekeda Recycling Energy Co. LTD., Luoyang, Henan, 471003, P. R. China, E-mail:

Funding source: Henan University of Science and Technology 10.13039/501100003172

Award Identifier / Grant number: 135100001

  1. Author contributions: All the authors have accepted responsibility for the entire content of this submitted manuscript and approved submission.

  2. Research funding: Henan University of Science and Technology Distinguished Professor Open Fund (Grant No. 135100001).

  3. Conflict of interest statement: The authors declare no conflicts of interest regarding this article.

References

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Received: 2021-04-21
Accepted: 2021-05-10
Published Online: 2021-08-02
Published in Print: 2021-09-27

© 2021 Ze-Sen Jin et al., published by De Gruyter, Berlin/Boston

This work is licensed under the Creative Commons Attribution 4.0 International License.

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  51. The crystal structure of N,N′-(Disulfanediyldi-2,1-phenylene)di(6′-methylpyridine)-2-carboxamide, C26H22N4O2S2
  52. Crystal structure of (E)-7-fluoro-2-(4-methoxy-2-(trifluoromethyl)benzylidene)-3,4-dihydronaphthalen-1(2H)-one, C19H14F4O2
  53. Crystal structure of ethyl 1-(4-fluorophenyl)-4-phenyl-1H-pyrrole-3-carboxylate, C19H16FNO2
  54. The crystal structure of cis-diaqua-bis (N-butyl-N-(pyridin-2-yl)pyridin-2-amine-κ2N,N′)cobalt(II)] dichloride trihydrate, C28H44Cl2N6O5Co
  55. Crystal structure of (E)-7-methoxy-2-((6-methoxypyridin-3-yl)methylene)-3,4-dihydronaphthalen-1(2H)-one, C18H17NO3
  56. Crystal structure of (E)-2-((3-fluoropyridin-4-yl)methylene)-7-methoxy-3,4-dihydronaphthalen-1(2H)-one, C17H14FNO2
  57. The crystal structure of 6-bromohexanoic acid, C6H11BrO2
  58. The crystal structure of 4-chloro-thiophenol, C6H5ClS
  59. The crystal structure of 4-bromobenzyl chloride, C7H6BrCl
  60. The crystal structure of di-tert-butyl dicarbonate, C10H18O5
  61. The crystal structure of (2-(4-chlorophenyl)-5-methyl-1,3-dioxan-5-yl)methanol, C12H15ClO3
  62. The crystal structure of the co-crystal: 2-hydroxybenzoic acid – N′-(butan-2-ylidene)pyridine-4-carbohydrazide, C10H13N3O·C7H6O3
  63. Crystal structure and anti-inflammatory activity of (E)-7-fluoro-2-((5-methoxypyridin-3-yl)methylene)-3,4-dihydronaphthalen-1(2H)-one, C17H14FNO2
  64. Crystal structure of (E)-7-fluoro-2-((6-methoxypyridin-3-yl)methylene)-3,4-dihydronaphthalen-1(2H)-one, C17H14FNO2
  65. Crystal structure of 1,1′-(butane-1,4-diyl)bis(3-propyl-1H-imidazol-3-ium) bis(hexafluoridophosphate), C32H56F24N8P4
  66. The crystal structure of dichlorido-bis(3-methyl-3-imidazolium-1-ylpropionato-κ2)-cadmium(II), C14H20CdCl2N4O4
  67. Crystal structure of 1-(2-cyanobenzyl)-3-cyano-4-phenyl-4-(2-cyanobenzyl)-1,4-dihydropyridine monohydrate, C56H42N8O
  68. The crystal structure of 3-(carboxymethyl)-1-ethenyl-1H-imidazol-3-ium chloride, C7H9N2O2Cl
  69. The crystal structure of adamantylmethoxydiphenylsilane, C23H28OSi
  70. Redetermination of the crystal structure of (2E,4Z,13E,15Z)-3,5,14,16-tetramethyl-2,6,13,17-tetraazatricyclo[16.4.0.07,12]docosa-1(22),2,4,7,9,11,13,15,18,20-decaene, C22H24N4
  71. Crystal structure of (E)-7-hydroxy-2-((6-methoxypyridin-2-yl)methylene)-3,4-dihydronaphthalen-1(2H)-one, C17H15NO3
  72. Crystal structure of catena-poly[diaqua-bis(μ2-1,3-di(1H-imidazol-1-yl)propane-κ2 N:N′)cobalt(II)] dinitrate, C18H28N10O8Co
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