Startseite Crystal structure of ethyl 5-amino-1-(pyridin-2-yl)-1H-pyrazole-4-carboxylate, C11H12N4O2
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Crystal structure of ethyl 5-amino-1-(pyridin-2-yl)-1H-pyrazole-4-carboxylate, C11H12N4O2

  • Zhiqiang Feng EMAIL logo , Yujie Liu , Yuxuan He , Wenjing Sha und Jie Tang
Veröffentlicht/Copyright: 5. Dezember 2018

Abstract

C11H12N4O2, monoclinic, Cc (no. 9), a = 16.146(5) Å, b = 14.653(4) Å, c = 14.621(4) Å, β = 106.052(8)°, V = 3324.3(16) Å3, Z = 12, Rgt(F) = 0.0415, wRref(F2) = 0.0965, T = 173(2) K.

CCDC no.: 1877004

The crystal structure is shown in the figure. Tables 1 and 2 contain details on crystal structure and measurement conditions and a list of the atoms including atomic coordinates and displacement parameters.

Table 1:

Data collection and handling.

Crystal:Colorless block
Size:0.22 × 0.21 × 0.20 mm
Wavelength:Mo Kα radiation (0.71073 Å)
μ:0.10 mm−1
Diffractometer, scan mode:PHOTON 100 CMOS, ω-scans
θmax, completeness:25°, >99%
N(hkl)measured, N(hkl)unique, Rint:11423, 5170, 0.048
Criterion for Iobs, N(hkl)gt:Iobs > 2 σ(Iobs), 4346
N(param)refined:463
Programs:Bruker programs [1], SHELX [2]
Table 2:

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2).

AtomxyzUiso*/Ueq
N10.7657(2)0.4213(2)0.7318(2)0.0284(8)
N20.74237(19)0.3972(2)0.8789(2)0.0260(8)
N30.7637(2)0.4138(2)0.9761(2)0.0316(9)
N40.6384(2)0.3108(2)0.7613(2)0.0303(8)
H4A0.6613910.3382090.7143110.036*
H4B0.5879910.2765090.7462110.036*
N50.5932(2)0.4137(2)0.3173(3)0.0340(8)
N60.56904(19)0.4313(2)0.4645(2)0.0273(8)
N70.5854(2)0.4063(2)0.5601(2)0.0328(8)
N80.4761(2)0.5316(2)0.3533(3)0.0408(10)
H8A0.4993280.5019220.3003960.049*
H8B0.4389470.5778190.3445910.049*
N90.2377(2)0.5791(2)0.2607(2)0.0252(8)
N100.26017(19)0.6038(2)0.1128(2)0.0225(8)
N110.2391(2)0.5862(2)0.0154(2)0.0316(9)
N120.36327(19)0.6906(2)0.2317(2)0.0260(8)
H12A0.4110920.7303460.2439900.031*
H12B0.3407560.6676650.2724270.031*
O10.53319(16)0.21976(17)0.86462(19)0.0292(7)
O20.57231(16)0.24424(17)1.0237(2)0.0289(7)
O30.37589(16)0.62655(17)0.45946(19)0.0353(7)
O40.40109(17)0.58416(18)0.6137(2)0.0351(7)
O50.46717(16)0.78304(17)0.12934(19)0.0282(6)
O60.43160(16)0.75870(18)−0.0287(2)0.0293(7)
C10.8057(3)0.4668(3)0.6762(3)0.0318(10)
H10.7908360.4522350.6103290.038*
C20.8666(3)0.5330(3)0.7095(3)0.0343(11)
H20.8932350.5633990.6677170.041*
C30.8883(3)0.5543(3)0.8046(3)0.0346(11)
H30.9309730.5992140.8295420.042*
C40.8478(2)0.5101(3)0.8642(3)0.0292(10)
H40.8608500.5243330.9300770.035*
C50.7871(2)0.4439(2)0.8231(3)0.0236(9)
C60.6732(2)0.3389(2)0.8510(3)0.0252(10)
C70.6505(2)0.3162(3)0.9332(3)0.0237(9)
C80.7092(2)0.3650(3)1.0064(3)0.0317(10)
H80.7088990.3626021.0712320.038*
C90.5804(2)0.2566(2)0.9349(3)0.0249(9)
C100.5043(3)0.1823(3)1.0299(3)0.0315(10)
H10A0.5152730.1205071.0084790.038*
H10B0.4480050.2039550.9892320.038*
C110.5037(3)0.1802(3)1.1325(3)0.0363(11)
H11A0.5597870.1589891.1719220.054*
H11B0.4584750.1385611.1399320.054*
H11C0.4924110.2416711.1526270.054*
C120.6346(3)0.3732(3)0.2606(3)0.0380(10)
H120.6193440.3900010.1952960.046*
C130.6973(3)0.3094(3)0.2913(3)0.0397(11)
H130.7239490.2812370.2482230.048*
C140.7212(2)0.2866(3)0.3866(3)0.0382(10)
H140.7654150.2428580.4100690.046*
C150.6809(2)0.3274(2)0.4477(3)0.0326(10)
H150.6963720.3132410.5136260.039*
C160.6161(2)0.3906(2)0.4079(3)0.0273(9)
C170.5053(2)0.4960(2)0.4408(3)0.0265(10)
C180.4810(2)0.5146(3)0.5228(3)0.0283(10)
C190.5325(2)0.4569(3)0.5923(3)0.0326(10)
H190.5294450.4547390.6562050.039*
C200.4148(3)0.5793(3)0.5261(3)0.0288(10)
C210.3330(2)0.6464(3)0.6203(3)0.0354(10)
H21A0.2764670.6238200.5814370.043*
H21B0.3431230.7076640.5969880.043*
C220.3345(3)0.6510(3)0.7238(3)0.0434(12)
H22A0.3236810.5901060.7458000.065*
H22B0.2896740.6931340.7313200.065*
H22C0.3909920.6727210.7615950.065*
C230.1985(3)0.5347(3)0.3167(3)0.0281(10)
H230.2143590.5490110.3826420.034*
C240.1361(3)0.4691(3)0.2836(3)0.0290(10)
H240.1104770.4380700.3259600.035*
C250.1118(3)0.4494(3)0.1870(3)0.0309(10)
H250.0682050.4055170.1618830.037*
C260.1515(2)0.4942(3)0.1279(3)0.0278(10)
H260.1362520.4820530.0614840.033*
C270.2150(2)0.5579(2)0.1690(3)0.0232(9)
C280.2949(2)0.6346(3)−0.0139(3)0.0294(10)
H280.2964030.636464−0.0783510.035*
C290.3526(2)0.6836(3)0.0598(3)0.0250(9)
C300.3287(2)0.6624(2)0.1412(3)0.0209(9)
C310.4218(2)0.7457(2)0.0580(3)0.0237(9)
C320.4984(3)0.8222(3)−0.0338(3)0.0293(10)
H32A0.5547920.8012770.0071950.035*
H32B0.4860740.883221−0.0115670.035*
C330.5010(3)0.8274(3)−0.1351(3)0.0331(11)
H33A0.5136330.766838−0.1563320.050*
H33B0.5459820.870362−0.1402980.050*
H33C0.4450280.848358−0.1750770.050*

Source of material

The compound we report here, ethyl 5-amino-1-(pyridin-2-yl)-1H-pyrazole-4-carboxylate, can be easily synthesized using a known synthetic procedure [3]. Evaporation at room temperature yielded colourless crystals of the desired compound.

Experimental details

All hydrogen atoms were identified in difference Fourier syntheses. C—H hydrogen atoms were placed on calculated positions with the help of the SHELXL program [2] and refined using a riding model: C—H = 0.93 and 0.96 Å for aromatic and CH3 H atoms, respectively, with Uiso(H) = k times Ueq(N,C), where k = 1.5 for CH3 H atoms and = 1.2 for all other H atoms.

Discussion

The title compound we report here is an important intermediate of pyrazolobenzotriazinone derivatives that act as COX inhibitors. Some COX inhibitors are used as nonsteroidal anti-inflammatory drug: they inhibit prostaglandin synthesis by blocking the cyclooxygenation of arachidonic acid to prostaglandin H2, the common biosynthetic precursor to numerous prostaglandins including both the pro-inflammatory ones and those that provide protection for the gastric mucosa. The gastric damage is therefore strictly linked to the gastro-protective prostaglandin-synthesis inhibition. 3-Pyrazolyl-substituted benzotriazinones have attracted research interest, in particular the influence that the heterocyclic nuclei on the 3-position may have on anti-inflammatory, analgesic, ulcerogenic activities and acute toxicity. The molecular structure of the title compound is shown in the figure, the bond lengths and angles are within normal ranges [4] and in good agreement with those found in the chemically related compound ethyl 1-acetyl-5-amino-1H-pyrazole-4-carboxylate [5]. The crystal structure analysis of the title compound revealed that the pyridine and pyrazole units in each of the three molecules present in the asymmetric unit A are not perfectly coplanar. The angles between the least-squares planes through the two ring systems are 6.8(2), 3.6(2) and 5.8(2)° for each of the three molecules in turn. In the crystal of the title compound, there are N—H⋯N and N—H⋯O intramolecular hydrogen bonds. Meanwhile, molecules are linked by C—H⋯O and N—H⋯O intermolecular hydrogen bonds to form a three-dimensional network. In the crystal structure, there are π–π stacking interactions, with centroid to centroid distances between ring centroids in the range of 3.983(3)–4.341(3) Å as calculated by the program PLATON [6].

Acknowledgements

This work is supported by PhD Research Startup Foundation of Jinling Institute of Technology (JIT-B-201808), Jiangsu Provincial Natural Science Foundation for Youths (Grant No. BK20170118), Gen guest project of Jinling Institute of Technology (2017ck007), Nanjing Social Science and Technology Development Foundation (201805009) and Excellent Teaching Team of Composite Materials and Engineering of Jinling Institute of Technology (20882013).

References

1. Bruker. APEX2, SAINT and SADABS. Bruker AXS Inc., Madison, WI, USA (2012).Suche in Google Scholar

2. Sheldrick, G. M.: A short history of SHELX. Acta Crystallogr. A64 (2008) 112–122.10.1107/S0108767307043930Suche in Google Scholar PubMed

3. Demetrio, R.; Onofrio, M.; Benedetta, M.; Fabiana, P.: Pyrazolobenzotriazinone derivatives as COX inhibitors: synthesis, biological activity, and molecular-modeling studies. Arch. Pharm. Chem. Life Sci. 10 (2010) 631–638.10.1002/ardp.200900317Suche in Google Scholar

4. Allen, F. H.; Kennard, O.; Watson, D. G.; Brammer, L.; Orpen, A. G.; Taylor, R.: Tables of bond lengths determined by X-ray and neutron diffraction. Part 1. Bond lengths in organic compounds. J. Chem. Soc. Perkin Trans. 2 (1987) S1–S19.10.1039/p298700000s1Suche in Google Scholar

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Received: 2018-08-24
Accepted: 2018-11-04
Published Online: 2018-12-05
Published in Print: 2019-03-26

©2019 Zhiqiang Feng et al., published by De Gruyter, Berlin/Boston

This work is licensed under the Creative Commons Attribution 4.0 Public License.

Artikel in diesem Heft

  1. Cover and Frontmatter
  2. Crystal structure of 1H-indole-5-carboxylic acid – 4,4′-bipyridine (2/1), C14H11N2O2
  3. Crystal structure of ethyl 2-amino-4-(4-ethoxyphenyl)-5-oxo-4H,5H-pyrano[3,2-c] chromene-3-carboxylate, C23H21NO6
  4. Crystal structure of ethyl 2-amino-4-(4-bromothiophen-2-yl)-5-oxo-5,6,7,8-tetrahydro-4H-chromene-3-carboxylate, C16H16BrNO4S
  5. The crystal structure of 6-amino-2-methyl-8-(4-(methylthio)phenyl)-2,3,8,8a-tetrahydroisoquinoline-5,7,7(1H)-tricarbonitrile – ethanol (1/1), C20H19N5S
  6. Crystal structure of 6-amino-8-(4-isopropylphenyl)-2-methyl-2,3,8,8a-tetrahydroisoquinoline-5,7,7(1H)-tricarbonitrile-ethanol (1/1), C24H29N5O
  7. Crystal structure of 1,1′-(ethane-1,2-diyl)bis(3-ethyl-1H-imidazol-3-ium)bis(hexafluorido phosphate), C12H20F12N4P2
  8. Crystal structure of dimethyl (3aS,6R,6aS,7S)-2-pivaloyl-2,3-dihydro-1H,6H,7H-3a,6:7,9a-diepoxybenzo[de]isoquinoline-3a1,6a-dicarboxylate, C21H25NO8
  9. Crystal structure of methyl 4-(4-bromothiophen-2-yl)-2,7,7-trimethyl-5-oxo-1,4,5,6,7,8-hexahydroquinoline-3-carboxylate, C18H20BrNO3S
  10. Hydrothermal synthesis and crystal structure of catena-poly[bis(4-((pyridin-4-ylmethyl)amino)benzoato-κ3N:O,O′)zinc(II) – 1,2-di(pyridin-4-yl)ethene – water (1/1/1), C38H34N6O5Zn
  11. The crystal structure of 1,2-dimethyl-3,4-dinitrobenzene, C8H8N2O4
  12. Synthesis and crystal structure of trans-tetraaqua-bis(3-(((7-hydroxy-3-(4-hydroxy-3-sulfonatophenyl)-4-oxo-4H-chromen-8-yl)methyl)ammonio)propanoato-κO)zinc(II) tetrahydrate, C38H48N2O26S2Zn
  13. Crystal structure of diaqua-bis(μ2-6-chloropyridin-2-olato-κ3N,O:O)-tetrakis(chloropyridin-2-olato-κ1O)-bis(penanthroline-κ2N,N′)diterbium(III), C54H38Cl6Tb2N10O8
  14. Crystal structure of oxidobis(piperidine-1-carbodithioato-κ2S,S′)vanadium(IV), C12H20N2OS4V
  15. Crystal structure of 2-((tert-butyldimethylsilyl)oxy)-5-methylisophthalaldehyde, C15H22O3Si
  16. Crystal structure of catena-poly[tetraiodido-(μ2-1,4-bis(2-methyl-1H-imidazol-1-yl)benzene-κ2N:N′)dimercury(II)], C14H14Hg2I4N4
  17. Crystal structure of tetrakis(n-butyl)-(μ2-1,2-bis(2-oxidobenzoyl)hydrazine-1,2-diido-κ6N,O,O′:N′,O′′,O′′′)ditin(IV), C30H44N2O4Sn2
  18. Crystal structure of ethyl 2-amino-4-(4-hydroxy-3-methoxyphenyl)-7-methyl-5-oxo-4H,5H-pyrano-[4,3-b]pyran-3-carboxylate, C19H19NO7
  19. Crystal structure of 3-aminopyrazine-2-carbohydrazide, C5H7N5O
  20. Crystal structure of ethanol-bis(N-((5-(ethoxycarbonyl)-3,4-dimethyl-1H-pyrrol-2-yl)methylene)benzohydrazonato-κ2N,O)copper(II), C36H42N6O7Cu
  21. Crystal structure of 3-methyl-2-oxo-2H-chromen-7-yl propionate, C13H12O4
  22. Crystal structure of 2-(dimethylamino)ethyl 4-aminobenzoate, C11H16N2O2
  23. Crystal structure of 3-(benzo[d]thiazol-2-ylamino)isobenzofuran-1(3H)-one, C15H10N2O2S
  24. Crystal structure of 3-((1H-benzo[d]imidazol-2-yl)amino)-2-(1H-benzo[d]imidazol-2-yl)isoindolin-1-one, C22H16N6O
  25. Crystal structure of (2,2′-bipyridine-κ2N,N′)bis(4-(dimethylamino)phenyldiphenylphosphane-κP)copper(I) tetrafluoroborate, C50H48BCuF4N4P2
  26. Crystal structure of citric acid–acetonitrile (1/1), C8H11NO7
  27. Crystal structure of diethyl 2-(4-methoxyphenyl)-1-phenyl-1,2-dihydropyridine-3,5-dicarboxylate, C24H25NO5
  28. The crystal structure of poly[triaqua-bis(μ3-2,5-dihydroxyterephthalato-κ4O,O′:O′′:O′′′)-(μ4-oxalato-κ4O,O′:O′′,O′′′)cerium(III)], C9H10CeO11
  29. Crystal structure of 1-(5-(anthracen-9-yl)-3-(4-hydroxyphenyl)-4,5-dihydro-1H-pyrazol-1-yl)propan-1-one, C26H22N2O2
  30. Synthesis and crystal structure of 5-(8-(((2-carboxyethyl)ammonio)methyl)-7-hydroxy-4-oxo-4H-chromen-3-yl)-2-hydroxybenzenesulfonate trihydrate, C19H23NO12S
  31. Crystal structure of rac-trans-6,6′-((cyclohexane-1,2-diylbis(azanylylidene))bis(methanylylidene))bis(2-bromophenolato-κ4N,N′,O,O′)-bis(methanol)cobalt(III) chloride, C22H25Br2Co8N2O4Cl
  32. Crystal structure of 1-((R)-(2′-(dimethylamino)-[1,1′-binaphthalen]-2-yl))-3-((S)-2-hydroxy-1-phenylethyl)thiourea, C31H29N3OS
  33. Crystal structure and photochemical property of 1,8-bis(p-tolylthio)pyrene, C30H22S2
  34. Crystal structure of 2-(2-(2-amino-6-chloro-9H-purin-9-yl)ethyl)propane-1,3-diyl diacetate, C14H18ClN5O4
  35. Crystal structure of ethyl 5-amino-1-(pyridin-2-yl)-1H-pyrazole-4-carboxylate, C11H12N4O2
  36. Crystal structure of trichloro-(4-chloro-2,6-bis(diphenylmethyl)-N-((pyridin-2-yl)methylene)aniline)-aluminum dichloromethane solvate, C39H31AlCl6N2
  37. Bis(ethanol-κO)-bis(6-aminopicolinato-κ2N,O)magnesium(II), C16H22O6N4Mg
  38. Crystal structure of catena-poly[aqua-(μ2-1,7-dicarba-closo-dodecaborane-1,7-dicarboxylato-κ2O:O′)-(1,10-phenanthrolin-κ2N,N′)copper(II)], C16H20B10CuN2O5
  39. Crystal structure of (1,2-dicarba-closo-dodecaborane-1,2-dithiolato κ2S,S′)-bis(1,10-phenanthroline κ2N,N′)zinc(II), C26H26B10Zn4S2
  40. Crystal structure of diaqua-bis(1,10-phenanthroline-κ2N,N′)-bis(1,7-dicarba-closo-dodecaborane-1,7-dicarboxylato-κ3O,O′:O′′) dicobalt(II) — ethanol (1/1), C34H46B20Co2N4O11
  41. Crystal structure of ((5,5′-dimethoxy-2,2′-(1,2-phenylenebis(nitrilomethylidyne)))diphenolato-κ4O,N,O′,N′)copper(II), C22H18N2CuO4
  42. Crystal structure of 1-(5-bromo-2-(4-methoxyphenyl)-1H-indol-7-yl)ethan-1-ol, C17H14BrNO2
  43. Crystal structure of (E)-2-(((6-bromopyridin-2-yl)methylene)amino)-3′,6′-bis(diethylamino)spiro[isoindoline-1,9′-xanthen]-3-one, C34H34N5O2Br
  44. Crystal structure of (Z)-2-((adamantan-1-ylimino)methyl)-5-methoxyphenol, C18H23NO2
  45. Crystal structure of bis((E)-2-ethoxy-6-(((2-hydroxyethyl)imino)methyl)phenolato-κ2N,O)copper(II), C22H28N2CuO6
  46. Crystal structure of 2,3-diphenyl-5,6-bis(4-methoxyphenyl)pyrazine, C30H24N2O2
  47. Crystal structure of dichlorido bis[1-((2,4-dimethyl-1H-imidazol-1-yl)methyl)-1H-benzo[d][1,2,3]triazole-κN]cadmium(II), Cd(C12H13N5)2Cl2
  48. The crystal structure of 1,5-di(naphthalen-2-yl)-3-(pyridin-2-yl)pentane-1,5-dione, C30H23NO2
  49. The crystal structure of 2-((3-methylthiophen-2-yl)methylene)malononitrile, C9H6N2S
  50. The crystal structure of 1,4-dinitroso-2,3,5,6-tetraacetoxy-piperazine, C12H16N4O10
  51. Crystal structure of bis(2,4,6-trichlorophenyl) malonate, C15H6Cl6O4
  52. The crystal structure of trans-dichlorido-bis(pyridine-2-carboxylato-κ2N,O)platinum(IV), C12H8Cl2N2O4Pt
  53. Crystal structure of 3-nitroquinoline 1-oxide, C9H6N2O3
  54. Crystal structure of 2-(piperidin-1-ium-4-yl)-1H-benzo[d]imidazol-3-ium dichloride dihydrate, C12H21Cl2N3O2
  55. Crystal structure of (4S,4aS,6aR,6bR,12aS,12bR,14aS,14bR)-3,3,6a,6b,9,9,12a-heptamethyloctadecahydro-1H,3H-4,14b-ethanophenanthro[1,2-h]isochromene, C30H50O
  56. Crystal structure of (E)-4-((2-fluoro-3-(trifluoromethyl)benzylidene)amino)-3-methyl-1H-1,2,4-triazole-5(4H)-thione, C11H8F4N4S
  57. Crystal structure of 5-(4-fluorophenyl)-4-methyl-2,4-dihydro-3H-1,2,4-triazole-3-thione, C9H8FN3S
  58. Crystal structure of catena-poly[(1-(4-fluorophenyl)-N–(5-((trimethylstannyl)thio)-1,3,4-thiadiazol-2-yl)methanimine], (C12H14FN3S2Sn)n
  59. The crystal structure of 4-(methoxycarbonyl)benzoic acid, C9H8O4
  60. The crystal structure of N,N′-(6-(thiophen-2-yl)-1,3,5-triazine-2,4-diyl)bis(2-methylpropane-2-sulfonamide) – ethyl acetate(2/1), C34H54N10O6S6
  61. Crystal structure of N′-(1-(2-hydroxyphenyl)ethylidene)-5-methyl-1-phenyl-1H-1,2,3-triazole-4-carbohydrazide, C18H17N5O2
  62. Crystal structure of 3-(4-methoxyphenyl)-1-phenylprop-2-yn-1-one, C16H12O2
  63. Crystal structure of N′-(1-(benzofuran-2-yl)ethylidene)-2-cyanoacetohydrazide, C13H11N3O2
  64. Crystal structure of hexa-μ2-chlorido-μ4-oxido-tetrakis(1-vinyl-1H-imidazole-κN)tetracopper(II), C20H24Cu4Cl6N8O
  65. Crystal structure of N′-((1E,2E)-4-(7-methoxy-2-oxo-2H-chromen-8-yl)-2-methylbut-2-en-1-ylidene)-4-methylbenzenesulfonohydrazide, C22H22O5N2S
  66. Crystal structure of 2-acetyl pyrene, C18H12O
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