Home Crystal structure of {2,2′-{cyclohexane-1,2-diylbis[(azanylylidene)methylylidene]}bis(2,4-dibromophenolato)-κ4 N,N′,O,O′}copper(II) ─ diethylformamide (1/1), C23H23Br4CuN3O3
Article Open Access

Crystal structure of {2,2′-{cyclohexane-1,2-diylbis[(azanylylidene)methylylidene]}bis(2,4-dibromophenolato)-κ4 N,N′,O,O′}copper(II) ─ diethylformamide (1/1), C23H23Br4CuN3O3

  • Weili Li ORCID logo EMAIL logo and Yang Bo
Published/Copyright: February 14, 2022

Abstract

C23H23Br4CuN3O3, P 1 (no. 2), a = 10.4769(4) Å, b = 10.7829(5) Å, c = 12.9824(5) Å, α = 98.153(2)°, β = 111.484(2)°, γ = 105.035(2)°, V = 1271.43(9) Å3, Z = 2, R gt (F) = 0.0338, wR ref (F 2) = 0.1158, T = 273.15 K.

CCDC no.: 2111978

The molecular structure is shown in the figure. Table 1 contains crystallographic data and Table 2 contains the list of the atoms including atomic coordinates and displacement parameters.

Table 1:

Data collection and handling.

Crystal: Block, clear blackish black
Size: 0.16 × 0.14 × 0.12 mm
Wavelength: MoKα radiation (0.71073 Å)
μ: 7.18 mm−1
Diffractometer, scan mode: Agilent CCD detector, φ and ω-scans
θ max, completeness: 26.4°, >99%
N(hkl)measured, N(hkl)unique, R int: 8469, 5230, 0.022
Criterion for I obs, N(hkl)gt: I obs > 2 σ(I obs), 4520
N(param)refined: 309
Programs: CrysAlisPRO [1], OLEX2 [2], SHELX [3, 4]
Table 2:

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2).

Atom x y z U iso*/U eq
Br2 0.63313 (5) 0.23839 (5) 0.73782 (4) 0.01910 (13)
Br1 0.96491 (6) 0.70727 (5) 1.09894 (4) 0.02541 (14)
Br4 0.18198 (6) 0.01430 (5) 0.34252 (5) 0.02474 (14)
Cu1 0.34896 (6) 0.48150 (6) 0.52712 (5) 0.01562 (15)
Br3 −0.28775 (7) 0.07518 (6) −0.01305 (5) 0.04215 (19)
O2 0.2553 (4) 0.3058 (3) 0.4296 (3) 0.0197 (7)
O1 0.4954 (4) 0.4229 (3) 0.6236 (3) 0.0187 (7)
N1 0.4484 (4) 0.6665 (4) 0.6160 (3) 0.0163 (8)
N2 0.2062 (5) 0.5473 (4) 0.4296 (4) 0.0178 (9)
C3 0.7808 (6) 0.4841 (5) 0.9077 (4) 0.0189 (10)
H3 0.8319 0.4369 0.9510 0.023*
C13 0.2303 (5) 0.6883 (4) 0.4780 (4) 0.0143 (9)
H13 0.1973 0.7297 0.4152 0.017*
C9 0.4276 (6) 0.8976 (5) 0.6178 (5) 0.0212 (11)
H9A 0.4057 0.9526 0.5652 0.025*
H9B 0.5307 0.9354 0.6685 0.025*
C4 0.8110 (5) 0.6180 (5) 0.9512 (4) 0.0180 (10)
C1 0.5909 (6) 0.4879 (5) 0.7264 (4) 0.0175 (10)
N3 0.2973 (6) 0.3072 (5) 0.7716 (5) 0.0318 (11)
C20 0.1406 (5) 0.2638 (5) 0.3338 (4) 0.0161 (9)
C7 0.5559 (6) 0.7073 (5) 0.7140 (4) 0.0185 (10)
H7 0.5935 0.7983 0.7484 0.022*
C8 0.3952 (5) 0.7578 (5) 0.5499 (4) 0.0153 (9)
H8 0.4406 0.7662 0.4961 0.018*
C19 0.0851 (5) 0.1270 (5) 0.2726 (4) 0.0154 (9)
C2 0.6729 (5) 0.4218 (5) 0.7982 (4) 0.0165 (10)
C15 0.0592 (5) 0.3421 (5) 0.2807 (4) 0.0155 (9)
C6 0.6252 (5) 0.6240 (4) 0.7768 (4) 0.0139 (9)
C14 0.0969 (5) 0.4817 (5) 0.3332 (4) 0.0167 (10)
H14 0.0384 0.5271 0.2949 0.020*
C18 −0.0358 (6) 0.0709 (5) 0.1701 (4) 0.0196 (10)
H18 −0.0662 −0.0188 0.1330 0.023*
O3 0.2322 (6) 0.4707 (5) 0.6960 (6) 0.0577 (15)
C10 0.3399 (6) 0.9002 (5) 0.6886 (5) 0.0223 (11)
H10A 0.3660 0.8503 0.7449 0.027*
H10B 0.3625 0.9914 0.7293 0.027*
C5 0.7374 (5) 0.6894 (5) 0.8889 (4) 0.0178 (10)
H5 0.7606 0.7799 0.9194 0.021*
C17 −0.1118 (6) 0.1533 (5) 0.1234 (4) 0.0244 (11)
C12 0.1428 (6) 0.6958 (5) 0.5493 (5) 0.0233 (11)
H12A 0.0394 0.6575 0.4994 0.028*
H12B 0.1655 0.6445 0.6050 0.028*
C11 0.1789 (6) 0.8403 (5) 0.6115 (5) 0.0221 (11)
H11A 0.1524 0.8910 0.5558 0.026*
H11B 0.1235 0.8438 0.6568 0.026*
C16 −0.0666 (6) 0.2866 (6) 0.1770 (4) 0.0226 (11)
H16 −0.1192 0.3394 0.1447 0.027*
C24 0.3728 (8) 0.2668 (7) 0.8723 (6) 0.0367 (15)
H24A 0.3045 0.1961 0.8821 0.055*
H24B 0.4166 0.3412 0.9388 0.055*
H24C 0.4471 0.2365 0.8626 0.055*
C23 0.2168 (7) 0.2056 (7) 0.6616 (6) 0.0412 (16)
H23A 0.2843 0.1784 0.6379 0.062*
H23B 0.1608 0.2417 0.6049 0.062*
H23C 0.1526 0.1301 0.6701 0.062*
C21 0.2945 (8) 0.4308 (7) 0.7783 (7) 0.0433 (17)
H21 0.3429 0.4913 0.8503 0.052*

Source of material

The structure was solved and refined with the OLEX2 program [2] as an interface together with the SHELXT and SHELXL programs [3, 4]. All H atoms were placed in geometrically idealized positions and refined using a riding model.

Experimental details

3,5-Dibromosalicylaldehyde (0.0263 g, 0.094 mmol) was dissolved in methanol (30 mL) with stirring, adding 1,2-cyclohexanediamine (0.047 mmol). The mixture was stirred and refluxed at 80 °C for 3 h. The solvent was removed using a rotary evaporator to give the Schiff-base ligand (+–)-3,5-BrsalcyH2. After this(+–)-3,5-BrsalcyH2 (0.1 mmol) was dissolved in a mixture containing 20 mL N,N–dimethylformamide (DMF) and 10 mL ethanol. Then, 0.1 g copper nitrate was add to the above solution and the resulting dark green mixture was further stirred at room temperature overnight. Dark brown crystals of the title compound were isolated after two weeks.

Comment

Schiff bases have a variety of chemical and biologica activities [5, 6]. The research concerning halogenated salen-type Cu-complexes is still at an early stage [710]. As a part of our current research interest on the regulating effect of Schiff base ligands on transition metal complexes, we report herein a new Cu(II) complex.

The basic molecular structure of the title compound shows a classic Cu-salen complex configuration, in which the copper center possesses tetra-coordinated environment. Neighbouring monomers are further linked by weak intermolecular halogen-bonding interactions: Br1⋯Br4i, D⋯A: 3.740(2) Å; Br2⋯Br3ii, D⋯A: 3.740(2) Å, symmetry code: (i): symmetry code: (i): (1 + x, 1 + y, 1 + z). Another interesting feature of the title compound is the DMF solvent molecules located between Cu-salen molecules contributing the stability of the supramolecular networks.

According to the result of PLATON software [19], the classic π-π stacking interactions is another important driving force in linking the adjacency molecules in to supermolecular networks.


Corresponding author: Weili Li, Department of Chemical Science and Technology, Kunming University, Yunnan, Kunming 65200, P. R. China, E-mail:

Funding source: Joint Basic Research Program (partial) of Yunnan Provincial Undergraduate Universities

Award Identifier / Grant number: 202101BA070001-052; 202001A0070059

Funding source: the Program for Innovative Research Team (in Science and Technology) in Universities of Yunnan Province

Funding source: Program for Innovative Research Team (in Science and Technology) in Universities of Yunnan Province

  1. Author contributions: All the authors have accepted responsibility for the entire content of this submitted manuscript and approved submission.

  2. Research funding: We gratefully acknowledge the financial support from the Joint Basic Research Program (partial) of Yunnan Provincial Undergraduate Universities (202101BA070001-052, 202001A0070059), and the Program for Innovative Research Team (in Science and Technology) in Universities of Yunnan Province.

  3. Conflict of interest statement: The authors declare no conflicts of interest regarding this article.

References

1. Agilent Technologies. CrysAlisPRO Software System; Agilent Technologies UK Ltd: Oxford, UK, 2015.Search in Google Scholar

2. Dolomanov, O. V., Bourhis, L. J., Gildea, R. J., Howard, J. A. K., Puschmann, H. OLEX2: a complete structure solution, refinement and analysis program. J. Appl. Crystallogr. 2010, 42, 339–341.10.1107/S0021889808042726Search in Google Scholar

3. Sheldrick, G. A short history of SHELX. Acta Crystallogr. 2008, A64, 112–122; https://doi.org/10.1107/s0108767307043930.Search in Google Scholar PubMed

4. Sheldrick, G. Crystal structure refinement with SHELXL. Acta Crystallogr. C 2015, 71, 3–8; https://doi.org/10.1107/s2053229614024218.Search in Google Scholar

5. Miyasaka, H., Saitoh, A., Abe, S. Magnetic assemblies based on Mn(III) salen analogues. Coord. Chem. Rev. 2007, 251, 2622–2664; https://doi.org/10.1016/j.ccr.2007.07.028.Search in Google Scholar

6. Nemec, V., Fotovi, L., Friščić, T., Cinčić, D. A large family of halogen-bonded cocrystals involving metal-organic building blocks with open coordination sites. Cryst. Growth Des. 2017, 17, 6169–6173; https://doi.org/10.1021/acs.cgd.7b01325.Search in Google Scholar

7. Wu, Q., Li, J., Liu, F., Xiao, J., Tang, Y., Zi, Q. Synthesis, crystallographic structure, Hirshfeld surface analysis, and DFT calculations of two Salen-type hetero-halogenated Schiff base Mn(IV)/(III) complexes. Russ. J. Coord. Chem. 2020, 46, 137–144; https://doi.org/10.1134/s1070328420020086.Search in Google Scholar

8. Wu, Q., Tang, Y., Zi, Q. Synthesis, crystallographic structure, Hirshfeld surface analysis and DFT calculations of two Salen-type halogenated Schiff-base Ni(II) complexes. Polyhedron 2019, 166, 123–129; https://doi.org/10.1016/j.poly.2019.03.021.Search in Google Scholar

9. Tohidiyan, Z., Sheikhshoaie, I., Khaleghi, M., Mague, J. T. A novel copper (II) complex containing a tetradentate Schiff base: synthesis, spectroscopy, crystal structure, DFT study, biological activity and preparation of its nano-sized metal oxide. J. Mol. Struct. 2017, 1134, 706–714.10.1016/j.molstruc.2017.01.026Search in Google Scholar

10. Mandal, S., Layek, M., Saha, R., Rizzoli, C., Bandyopadhyay, D. Synthesis, crystal structure and antibacterial activity of four mononuclear Schiff base complexes of copper(II) and nickel(II). Transition Met. Chem. 2021, 46, 9–16. https://doi.org/10.1016/j.molstruc.2017.01.026.Search in Google Scholar

Received: 2021-09-29
Accepted: 2021-11-21
Published Online: 2022-02-14
Published in Print: 2022-04-26

© 2022 Weili Li and Yang Bo, published by De Gruyter, Berlin/Boston

This work is licensed under the Creative Commons Attribution 4.0 International License.

Articles in the same Issue

  1. Frontmatter
  2. New Crystal Structures
  3. Crystal structure of {2,2′-{cyclohexane-1,2-diylbis[(azanylylidene)methylylidene]}bis(2,4-dibromophenolato)-κ4 N,N′,O,O′}copper(II) ─ diethylformamide (1/1), C23H23Br4CuN3O3
  4. The crystal structure of 2-(2-methyl-6-phenyl-4H-pyran-4-ylidene)-1H-indene-1,3(2H)-dione, C21H14O3
  5. Crystal structure of bis((1-methylbenzimidazol-2-yl)methyl)amine, C18H19N5
  6. Crystal structure of (E)-N′-(1-(2-hydroxy-4-methoxyphenyl)ethylidene) isonicotinohydrazide, C15H15N3O3
  7. Crystal structure of 2-((4-phenyl-5-(pyridin-4-yl)-4H-1,2,4-triazol-3-yl)thio)acetonitrile, C15H11N5S
  8. The crystal structure of 2,2′-((1E,1′E)-hydrazine-1,2-diylidenebis(methaneylylidene))bis(4-chlorophenol), C14H10Cl2N2O2
  9. Dichlorido-{2,6-bis(4,5-dihydro-1H-pyrazol-3-yl)pyridine-κ3 N,N′,N″}zinc(II), C11H9C12N5Zn
  10. The crystal structure of dichlorido-(2-((4-phenyl-2H-1,2,3-triazol-2-yl)methyl)pyridine-κ2N,N′)palladium(II), C14H12Cl2N4Pd
  11. The crystal structure of 1-(N1-benzyl-2-methyl-4-nitro-imidazol-5-yl)-4-(prop-2-yn-1-yl) piperazine, C18H21N5O2
  12. Crystal structure of (μ4-(1,2,4,5-tetra(1,2,4-triazol-1-ylmethyl)-benzene-κ4N:N1:N2:N3)disilver(I) diperchlorate
  13. The crystal structure of 1-(2-bromoethane)-4-amine-3,5-dinitropyrazole, C5H6Br1N5O4
  14. Crystal structure of (E)-1-(4-benzyl-3,5-dioxomorpholin-2-ylidene)ethyl acetate, C15H15N1O5
  15. The crystal structure of poly[diaqua-(μ2-1,2,4,5-tetrakis(1,2,4-triazol-1-ylmethyl)-benzene-κ2N:N′)-bis(μ3-terephthalato-κ3O:O′:O′′)dicadmium(II)], C17H15N6O5Cd
  16. Crystal structure of (E)-N′-(1-(5-chloro-2-hydroxyphenyl) ethylidene)thiophene-2-carbohydrazide, C13H11ClN2O2S
  17. The crystal structure of [(2,2′-bipyridine-k2 N,N)-bis(6-phenylpyridine-2-carboxylato-k2 N,O)cobalt(II)]-monohydrate, C36H26N4O5Co
  18. Crystal structure of (E)-N′-(2-chloro-6-hydroxybenzylidene)-3-hydroxybenzo-hydrazide monohydrate, C14H13ClN2O4
  19. Crystal structure of 1,1′-(methylene)bis(pyridin-1-ium) bis(1,2-dicyanoethene-1,2-dithiolato-κ2S:S)nickel(II), C42H30N14Ni2S8
  20. Crystal structure of 1,1′-(1,2-ethanediyl)bis(pyridin-1-ium) bis(1,2-dicyanoethene-1,2-dithiolato-κ2 S:S)nickel(II), C20H14N6NiS4
  21. The crystal structure of 1-methyl-1H-pyrazol-2-ium nitrate, C4H7O3N3
  22. The crystal structure of 4,4′-diselanediylbis(8-(hexyloxy)-3,6-dimethyl-1-(piperidin-1-yl)isoquinoline-7-carbonitrile), C46H60N6O2Se2
  23. The crystal structure of tris(6-methylpyridin-2-yl)phosphine selenide, C18H18N3PSe
  24. The crystal structure of 1,2-bis(2,4-dinitro-1H-imidazol-1-yl)ethane ─ acetone (1/1), C11H12N8O9
  25. Crystal structure of [diaqua[2,2′-(1,2-phenylene)bis(1H-imidazole-4-carboxylato-5-carboxy)-κ4N,N′,O,O′]nickel(II)] tetrahydrate, C16H12N4NiO10·4H2O
  26. The crystal structure of tris(4-methyl-1H-pyrazol-1-yl)methane, C13H16N6
  27. The crystal structure of 5,6-dichloro-2-(quinolin-8-yl)isoindoline-1,3-dione, C17H8Cl2N2O2
  28. Crystal structure of (E)-(2-methoxy-benzylidene)-(4-[1,2,4]triazol-1-yl-phenyl)-amine, C16H14N4O
  29. The crystal structure of (Z)-2-(4-(4-bromophenyl)thiazol-2-yl)-4-(3-hydroxybut-2-enoyl)-5-methyl -1,2-dihydro-3H-pyrazol-3-one – methanol (1/1), C18H18N3O4S
  30. Crystal structure of tetraaqua-tris(nitrato-κ2 O,O′) erbium(III) monohydrate, Er(NO3)3·5H2O, H10ErN3O14
  31. The crystal structure of 1-methyl-2-nitro-1H-imidazole 3-oxide, C4H5N3O3
  32. The crystal structure of 1-methyl-2-nitroimidazole, C4H5N3O2
  33. The crystal structure of 2-carboxyl-4-nitroimidazole monohydrate, C4H5N3O5
  34. Crystal structure of bis[hydrido-hexaphenylcarbodiphosphoran][tetra-trifluoromethyl-(μ-diiodo)-diplatinat]
  35. The crystal structure of poly[μ2-aqua- aqua-(μ3-(E)-2-(4-((2-carbamothioylhydrazineylidene)methyl)phenoxy)acetato-κ3 O:S:S)sodium(I)], C10H14N3O5SNa
  36. The twinned crystal structure of [4,4′-bipyridine]-1,1′-diium hexachloridostannate(IV), C10H10N2SnCl6
  37. The crystal structure of [(2,2′-bipyridine-k2 N,N)-bis(6-phenylpyridine-2-carboxylate-k2 N,O)copper(II)], C34H24N4O4Cu
  38. Crystal structure of trans-1,2-bis(pyridinium-4-yl) ethylene bis(2-carboxy-4-bromobenzoate) – water (1/4), C14H14BrNO6
  39. Crystal structure of poly[diaqua-(μ3-fumarato)-(μ3-maleato)-(μ4-1,2,4,5-tetrakis((1H-1,2,4-triazol-1-yl)methyl)benzene)tetracadmium(II)] dihydrate, C34H32N12O9Cd4
  40. Crystal structure of a second modification of Pachypodol, C18H16O7
  41. Crystal structure of methyl 2-(4-(2-(cyclopentyl-amino)-1-(N-(4-methoxyphenyl)-1-methyl-5-phenyl-1-H-pyrazole-3-carboxamido)-2-oxoethyl)phenyl)acetate, C34H36N4O5
  42. The crystal structure of catena-poly[(m2-4,4′-bipyridine-κ2 N:N)-bis(6-phenylpyridine-2-carboxylato-κ2 N,O) zinc(II)], C34H24N4O4Zn
  43. The crystal structure of hexaquamagnesium(II) (2,4-bis(nitroimino)-6-oxo-1,3,5-triazinane-1,3-diide), C3H15MgN7O12
  44. The crystal structure of 7-Bromo-2-(4-chloro-phenyl)-quinoxaline, C14H9BrClN2
  45. Crystal structure of methyl 4-{[4-(4-cyanobenzamido)phenyl]amino}benzofuro[2,3-d]pyrimidine-6-carboxylate, C26H17N5O4
  46. The crystal structure of (4SR)-7-(3,4-dichlorobenzyl)-4,8,8-trimethyl-7,8-dihydroimidazo[5,1c][1,2,4]triazine-3,6(2H,4H)-dione, C15H16Cl2N4O2
  47. Crystal structure of catena-poly[{μ2-3-carboxy-2,3-bis((4-methylbenzoyl)oxy)propanoato-κ2 O:O′}tris(methanol-κ1 O)lanthanum(III)], C63H63LaO27
Downloaded on 22.9.2025 from https://www.degruyterbrill.com/document/doi/10.1515/ncrs-2021-0379/html
Scroll to top button