Home Crystal structure of catena-poly[(1,4,8,11-tetraazacyclotetradecane-κ4N,N′,N″,N′′′)-bis(μ2-thiocyanato-κ2N:S)-bis(thiocyanato-κS)-nickel(II)palladium(II)], C14H24N8NiPdS4
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Crystal structure of catena-poly[(1,4,8,11-tetraazacyclotetradecane-κ4N,N,N,N′′′)-bis(μ2-thiocyanato-κ2N:S)-bis(thiocyanato-κS)-nickel(II)palladium(II)], C14H24N8NiPdS4

  • Kwang Ha ORCID logo
Published/Copyright: February 15, 2021

Abstract

C14H24N8NiPdS4, triclinic, P1 (no. 2), a = 12.0330(8) Å, b = 12.0959(8) Å, c = 15.9551(12) Å, α = 85.768(3)°, β = 71.917(3)°, γ = 87.899(3)°, V = 2201.3(3) Å3, Z = 4, Rgt(F) = 0.0379, wRref(F2) = 0.0973, T = 223 K.

CCDC no.: 2059322

Table 1 contains crystallographic data and Table 2 contains the list of the atoms including atomic coordinates and displacement parameters.

Table 1:

Data collection and handling.

Crystal:Red block
Size:0.20 × 0.12 × 0.10 mm
Wavelength:Mo Kα radiation (0.71073 Å)
μ:2.07 mm−1
Diffractometer, scan mode:PHOTON 100 CMOS, φ and ω
θmax, completeness:26.1°, >99%
N(hkl)measured, N(hkl)unique, Rint:56699, 8670, 0.029
Criterion for Iobs, N(hkl)gt:Iobs > 2 σ(Iobs), 7640
N(param)refined:511
Programs:Bruker [1], SHELX [2], ORTEP-3 [3], PLATON [4]
Table 2:

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2).

AtomxyzUiso*/Ueq
Pd10.40991 (3)0.01828 (3)0.65109 (2)0.03873 (10)
Ni10.50000.50000.50000.02997 (15)
Ni20.00000.00000.50000.04070 (19)
S10.55706 (14)0.13849 (12)0.64671 (14)0.0757 (5)
S20.36764 (14)0.11266 (14)0.53229 (11)0.0680 (4)
S30.25772 (11)−0.10661 (10)0.68036 (9)0.0500 (3)
S40.46462 (16)−0.10186 (11)0.75464 (12)0.0691 (5)
N10.5270 (4)0.3424 (3)0.5598 (3)0.0460 (9)
N20.1732 (7)0.2397 (5)0.6196 (5)0.100 (2)
N30.1097 (4)−0.0405 (3)0.5801 (3)0.0492 (10)
N40.5779 (5)0.0179 (5)0.8466 (4)0.0743 (15)
N50.5838 (6)0.4486 (4)0.3767 (3)0.0788 (18)
H50.58870.51440.33500.095*
N60.3524 (5)0.4390 (5)0.4835 (4)0.0820 (19)
H60.33960.36580.51680.098*
N70.1470 (4)0.0048 (4)0.3892 (3)0.0617 (12)
H70.2160−0.00040.41060.074*
N8−0.0032 (4)−0.1667 (4)0.4780 (3)0.0628 (13)
H8−0.0622−0.17390.44710.075*
C10.5361 (4)0.2574 (4)0.5932 (3)0.0439 (10)
C20.2567 (6)0.1864 (4)0.5834 (4)0.0609 (15)
C30.1734 (4)−0.0651 (4)0.6187 (3)0.0398 (10)
C40.5310 (4)−0.0282 (4)0.8078 (3)0.0481 (11)
C50.7838 (7)0.4833 (8)0.3923 (7)0.116 (3)
H5A0.78120.55530.36040.139*
H5B0.86510.45660.37270.139*
C60.7133 (7)0.4062 (6)0.3633 (5)0.090 (3)
H6A0.71160.33440.39640.108*
H6B0.75100.39470.30060.108*
C70.5179 (11)0.3739 (6)0.3550 (5)0.118 (4)
H7A0.52540.30080.38380.142*
H7B0.54360.36750.29090.142*
C80.3912 (9)0.4152 (7)0.3862 (5)0.102 (3)
H8A0.38300.48300.35090.122*
H8B0.34030.35910.37680.122*
C90.2464 (7)0.4975 (9)0.5125 (7)0.117 (4)
H9A0.18420.45540.50250.141*
H9B0.25230.56890.47830.141*
C100.1507 (6)0.2125 (6)0.3812 (4)0.076 (2)
H10A0.20710.20360.41440.091*
H10B0.17650.27520.33760.091*
C110.1584 (5)0.1094 (6)0.3312 (4)0.076 (2)
H11A0.09650.11270.30320.091*
H11B0.23370.10810.28430.091*
C120.1461 (6)−0.0947 (6)0.3457 (4)0.0720 (17)
H12A0.2237−0.10830.30400.086*
H12B0.0898−0.08650.31240.086*
C130.1129 (6)−0.1908 (6)0.4133 (4)0.0712 (16)
H13A0.1090−0.25850.38420.085*
H13B0.1719−0.20220.44400.085*
C14−0.0365 (6)−0.2434 (5)0.5565 (5)0.0748 (19)
H14A0.0235−0.24360.58630.090*
H14B−0.0406−0.31850.53860.090*
Pd20.93554 (2)0.44721 (2)0.12721 (2)0.02725 (8)
Ni31.00000.00000.00000.03090 (16)
Ni40.50000.50000.00000.02828 (15)
S50.85268 (10)0.59981 (9)0.06996 (7)0.0390 (2)
S61.05965 (12)0.57290 (10)0.15527 (10)0.0545 (3)
S71.02674 (9)0.30026 (8)0.18631 (7)0.0362 (2)
S80.81388 (10)0.31918 (9)0.09892 (9)0.0461 (3)
N90.6479 (4)0.6245 (4)0.2142 (3)0.0551 (11)
N101.0935 (5)0.4998 (6)0.3169 (4)0.0837 (17)
N111.0144 (3)0.1220 (3)0.0859 (3)0.0404 (8)
N120.6275 (3)0.4230 (3)0.0522 (2)0.0366 (8)
N130.8194 (4)0.0037 (4)0.0536 (3)0.0624 (12)
H130.79950.06450.09420.075*
N140.9957 (5)−0.1255 (3)0.0958 (3)0.0618 (13)
H141.0071−0.19630.06650.074*
N150.5137 (4)0.6438 (3)0.0586 (3)0.0499 (10)
H150.57940.63090.08320.060*
N160.6323 (3)0.5413 (4)−0.1154 (3)0.0522 (11)
H160.70710.5218−0.10390.063*
C150.7333 (4)0.6139 (3)0.1573 (3)0.0385 (9)
C161.0765 (4)0.5283 (4)0.2521 (4)0.0506 (12)
C171.0189 (3)0.1950 (3)0.1267 (3)0.0305 (8)
C180.7058 (3)0.3851 (3)0.0710 (3)0.0314 (8)
C190.7951 (6)0.1229 (5)−0.0756 (5)0.075 (2)
H19A0.78690.1883−0.04130.090*
H19B0.74150.1340−0.11100.090*
C200.7523 (6)0.0261 (5)−0.0115 (5)0.0764 (19)
H20A0.7569−0.0400−0.04450.092*
H20B0.66990.03900.02120.092*
C210.7876 (6)−0.0966 (5)0.1063 (5)0.0736 (17)
H21A0.7883−0.15700.06850.088*
H21B0.7082−0.08930.14710.088*
C220.8701 (6)−0.1231 (4)0.1570 (4)0.0621 (15)
H22A0.8512−0.19540.18950.075*
H22B0.8622−0.06720.20010.075*
C231.0814 (7)−0.1226 (4)0.1396 (5)0.080 (2)
H23A1.0722−0.18710.18200.096*
H23B1.0691−0.05570.17270.096*
C240.4094 (5)0.6511 (5)0.1338 (4)0.0657 (15)
H24A0.34380.68010.11420.079*
H24B0.42220.70160.17520.079*
C250.5428 (5)0.7474 (4)−0.0019 (4)0.0648 (16)
H25A0.47550.7694−0.02180.078*
H25B0.55760.80750.03110.078*
C260.6469 (5)0.7318 (5)−0.0803 (4)0.0665 (16)
H26A0.66890.8050−0.11040.080*
H26B0.71140.7048−0.05860.080*
C270.6389 (5)0.6564 (5)−0.1476 (4)0.0671 (17)
H27A0.56950.6765−0.16530.081*
H27B0.70760.6664−0.20000.081*
C280.6179 (5)0.4616 (6)−0.1783 (3)0.0629 (15)
H28A0.55460.4877−0.20160.075*
H28B0.69010.4582−0.22800.075*

Source of material

To a solution of [Ni(NCS)2(cyclam)] (cyclam = 1,4,8,11-tetraazacyclotetradecane; 0.2229 g, 0.594 mmol) in acetone (20 ml) was added K2Pd(SCN)4 (0.2501 g, 0.600 mmol) and refluxed for 2 h. After cooling, the formed precipitate was separated by filtration, washed with acetone, and dried at 50 °C, to give a redbrown powder (0.1815 g). Crystals were obtained by slow evaporation from an N,N-dimethylformamide (DMF) solution at 60 °C.

Experimental details

Hydrogen atoms were positioned geometrically and allowed to ride on their parent atoms with d(C–H) = 0.98 Å, d(N–H) = 0.99 Å and Uiso(H) = 1.2Ueq(C,N) with the help of the SHELXL program (AFIX 23 or 13 options) [2]. The highest peak (1.25 e Å−3) and the deepest hole (−1.07 e Å−3) in the difference Fourier map are located 0.99 and 0.64 Å from the atoms N13 and S2, respectively.

Comment

The crystal structures of the related heterometallic cyanido-complexes [Ag(cyclam)M1(CN)4]n (cyclam = 1,4,8,11-tetraazacyclotetradecane; M1 = Pd, Pt) [5] and [Cu(cyclam)M2(CN)4]n (M2 = Ni, Pd, Pt) [6] have been determined previously. The structures are formed by one-dimensional cyanido-bridged chains.

The title compound consists of two streochemically different heterometallic complexes [Ni(cyclam)Pd(SCN)4]n. In the trans-like complex moiety of the title coordination polymer (upper part of the Figure), two trans-thiocyanato ligands of Pd(II) unit [Pd(SCN)4]2− are linked to two Ni(II) units [Ni(cyclam)]2+, whereas in the cis-like complex moiety, two cis-coordinated thiocyanato ligands of the Pd(II) unit (lower part of the Figure) are linked to the two Ni(II) units. The both complexes moieties are connected to exhibit one-dimensional SCN-bridged chains. The Pd(II) ion in each complex is four-coordinated in a distorted square-planar environment by four S atoms from four SCN ligands, whereas the Ni(II) ions in each complex are six-coordinated in a distorted octahedral coordination geometry by four N atoms of a tetradentate cyclam ligand and two N atoms derived from two mutually trans-positioned bridging SCN ligands and are located on an inversion center. The Pd–S bond lengths are almost equal with d(Pd–S) = 2.3133(13)–2.3507(13) Å. The Ni–N(thiocyanato) bonds with d(Ni–N) = 2.119(3)–2.133(3) Å are slightly longer than the Ni–N(cyclam) bonds with d(Ni–N) = 2.043(4)–2.076(5) Å. In the crystal structure, the complexes display intra- and intermolecular N–H⋯N hydrogen bonds with distances of 2.909(6)–3.447(9) Å between the donor and acceptor atoms, to stabilize the three-dimensional packing [4].


Corresponding author: Kwang Ha, School of Chemical Engineering, Research Institute of Catalysis, Chonnam National University, Gwangju61186, Republic of Korea, E-mail:

Funding source: Ministry of Education

Award Identifier / Grant number: 2018R1D1A1B07050550

Acknowledgements

The author thanks the KBSI, Seoul Center, for the X-ray data collection.

  1. Author contributions: All the authors have accepted responsibility for the entire content of this submitted manuscript and approved submission.

  2. Research funding: This research was supported by Basic Science Research Program through the National Research Foundation of Korea (NRF) funded by the Ministry of Education (grant number: 2018R1D1A1B07050550).

  3. Conflict of interest statement: The authors declare no conflicts of interest regarding this article.

References

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Received: 2021-01-15
Accepted: 2021-01-28
Published Online: 2021-02-15
Published in Print: 2021-05-26

© 2021 Kwang Ha, published by De Gruyter, Berlin/Boston

This work is licensed under the Creative Commons Attribution 4.0 International License.

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  56. Crystal structure of (R)-6-(benzo[b]thiophen-5-yl)-2-methyl-2,6-dihydrobenzo [5,6] silino[4,3,2-cd]indole, C23H17NSSi
  57. Crystal structure of catena-poly[bis(μ2-thiocyanato-κ2N:S)-(2-(5-methyl-1H-pyrazol-3-yl)pyridine-κ2N,N′)cadmium(II)]–dioxane (1/1), C15H17CdN5O2S2
  58. Crystal structure of poly[aqua-(μ2-1,4-bis(2′-carboxylatophenoxy)benzene-κ2O:O′)-(μ2-4,4′-bipyridione-κ2N:N′)cadmium(II)] monhydrate, C30H22CdN2O7⋅H2O
  59. Crystal structure of catena-poly[tetraaqua-(μ2-4,4′-bipyridine-k2N:N′)-bis(μ2-4′-methyl-[1,1′-biphenyl]-3,5-dicarboxylato-k4O,O′:O″,O′″)dicadmium(II)] dihydrate, C20H20NO7Cd
  60. Crystal structure of 1‐tert‐butyl‐3‐(2,6‐diisopropyl‐4‐phenoxyphenyl)‐2-methylisothiourea, C24H34N2OS
  61. Crystal structure of catena-poly[triaqua-(μ2-1,3-di(1H-imidazol-1-yl)propane-κ2N:N′)-(4,4′-(1H-1,2,4-triazole-3,5-diyl)dibenzoato-κ1O)cobalt(II)] — N,N′-dimethylformamide (1/1), C28H34N8O8Co
  62. Crystal structure of tetraaqua-bis(1,4-di(1H-imidazol-1-yl)benzene-κ1N)manganese(II) 2,3-dihydroxyterephthalate, C32H32MnN8O10
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