Home Synthesis and crystal structure of 3-N-acetyl-5-(pyridin-3-yl)-2-(quinolin-2-yl)-1,3,4-oxadiazoline, C18H14N4O2
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Synthesis and crystal structure of 3-N-acetyl-5-(pyridin-3-yl)-2-(quinolin-2-yl)-1,3,4-oxadiazoline, C18H14N4O2

  • Xiang Yu ORCID logo , Lu Peng , Xin Wang and Ya-Fang Chen EMAIL logo
Published/Copyright: July 10, 2020

Abstract

C18H14N4O2, triclinic, P1̄ (no. 2), a = 7.6557(7) Å, b = 11.0905(8) Å, c = 11.3544(9) Å, α = 61.6430(10)°, β = 73.600(2)°, γ = 75.397(2)°, V = 805.86(11) Å3, Z = 2, Rgt(F) = 0.0609, wRref(F2) = 0.1633, T = 298 K.

CCDC no.: 1997954

The molecular structure is shown in the figure. Table 1 contains crystallographic data and Table 2 contains the list of the atoms including atomic coordinates and displacement parameters.

Table 1:

Data collection and handling.

Crystal:Colourless block
Size:0.45 × 0.44 × 0.40 mm
Wavelength:Mo Kα radiation (0.71073 Å)
μ:0.09 mm−1
Diffractometer, scan mode:Oxford Diffraction Gemini, omega scans
θmax, completeness:25.0°, 96%
N(hkl)measured, N(hkl)unique, Rint:3916, 2736, 0.029
Criterion for Iobs, N(hkl)gt:Iobs > 2 σ(Iobs), 1688
N(param)refined:218
Programs:CrysAlisPRO [1], Olex2 [2], SHELX [3], [4]
Table 2:

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2).

AtomxyzUiso*/Ueq
O10.9068(2)0.39481(18)0.3208(2)0.0422(5)
O20.7590(3)0.0015(2)0.5539(2)0.0575(6)
N10.7505(3)0.2260(2)0.4974(2)0.0416(6)
N20.7144(3)0.3405(2)0.5279(3)0.0418(6)
N30.9516(3)0.7840(2)0.2686(3)0.0514(7)
N40.6239(3)0.3030(2)0.2498(2)0.0383(6)
C10.8080(3)0.4322(3)0.4232(3)0.0344(7)
C20.8777(4)0.2529(3)0.3643(3)0.0384(7)
H20.99370.19000.37800.046*
C30.9303(4)0.6579(3)0.2907(3)0.0432(8)
H30.99380.62670.22530.052*
C40.8186(4)0.5703(3)0.4059(3)0.0338(7)
C50.7217(4)0.6185(3)0.5040(3)0.0384(7)
H50.64510.56420.58150.046*
C60.7420(4)0.7481(3)0.4833(3)0.0418(7)
H60.68000.78220.54690.050*
C70.8572(4)0.8263(3)0.3656(3)0.0470(8)
H70.87000.91310.35280.056*
C80.8000(4)0.2477(3)0.2575(3)0.0358(7)
C90.9168(4)0.1899(3)0.1694(3)0.0419(7)
H91.03720.15110.18040.050*
C100.8507(4)0.1919(3)0.0687(3)0.0488(8)
H100.92550.15400.01080.059*
C110.6653(4)0.2529(3)0.0529(3)0.0432(8)
C120.5560(4)0.3057(3)0.1471(3)0.0382(7)
C130.3697(4)0.3666(3)0.1346(3)0.0507(8)
H130.29640.39970.19670.061*
C140.2982(5)0.3765(4)0.0314(4)0.0668(10)
H140.17710.41650.02380.080*
C150.4085(6)0.3259(4)−0.0633(4)0.0757(11)
H150.35920.3341−0.13320.091*
C160.5878(6)0.2649(4)−0.0537(4)0.0655(10)
H160.65810.2315−0.11640.079*
C170.7078(4)0.0961(3)0.5885(3)0.0422(8)
C180.6002(5)0.0792(3)0.7292(3)0.0604(9)
H18A0.5387−0.00100.77150.091*
H18B0.51100.15980.72060.091*
H18C0.68310.06820.78430.091*

Source of material

In a representative experiment 3-methylquinolin (1.0 mmol) reacted with SeO2 (1.1 mmol) in dioxane (10 mL) at 80 °C to afford the aldehyde, and then the mixture was reacted with nicotinohydrazide (1.0 mmol) in acetic anhydride (5 mL). The reaction mixture was refluxed and the title compound was purified by preparative thin-layer chromatography (PTLC) and recrystallised from dichloromethane. 1H NMR (400 MHz, Chloroform-d) δ [ppm]: 9.14 (d, J = 2.8 Hz, 1H), 8.73 (dd, J = 4.9, 1.2 Hz, 1H), 8.24 (d, J = 8.4 Hz, 1H), 8.13–8.18 (m, 2H), 7.84 (d, J = 8.4 Hz, 1H), 7.74 (t, J = 7.2 Hz, 1H), 7.54–7.60 (m, 2H), 7.36–7.40 (m, 1H), 7.26 (m, 1H), 2.42 (s, 3H).

Experimental details

Crystal structure determination of C18H14N4O2 by X-ray diffractions was carried on a Oxford Diffraction Gemini with the crystal kept at 298 K during data collection. The structure was solved with the Olex2 program [2] as an interface together with the SHELXT and SHELXL programs [3], [4]. Hydrogen atoms were treated using a riding model.

Comment

Recent studies show that introduction of active fragments into quinolin could increase biological activity [5]. Oxazoline is a group of heterocyclic compounds with nitrogen and oxygen atoms, which showed bioactivities such as anti-HIV [6] and antibacterial [7] activities. To further study the structure-activity relationship of quinolin, here we introduced oxazoline ring and prepared an quinolin-based derivative to find compounds with potential activity.

The asymmetric unit of the title structure consists of one cystallographically independent molecule (shown in the figure). One 1,3,4-oxadiazolyl group, one 3-pyridinyl ring and one quinolinyl moiety form the title molecule. All bond lengths are in normal ranges and they are similar with the known compound [8]. The short C—N bond length of 1.303(3) Å (N2-C1) suggests a localized double bond, and the C—N bond lengths of 1.486(3) Å (N1-C2) suggests a localized single bond. The bond distance of C17-O2 is 1.227(3) Å, which is typical for a carbonyl group.

Acknowledgements

This work was supported by the Science and Technology Fund of Guizhou [QKH-PTRC(2017)5735-22], Guizhou Provincial Natural Science Foundation [QKH-J(2020)1Y070] and the Youth Talent Development Project of Guizhou Provincial Department of Education [2017]169.

References

1. Oxford Diffraction: CrysAlisPro, 1.171.39.46, SCALE3 ABSPACK. Oxford Diffraction Ltd, Yarnton, England (2018).Search in Google Scholar

2. Dolomanov, O. V.; Bourhis, L. J.; Gildea, R. J.; Howard, J. A. K.; Puschmann, H.: OLEX2: a complete structure solution, refinement and analysis program. J. Appl. Crystallogr. 42 (2009) 339–341.10.1107/S0021889808042726Search in Google Scholar

3. Sheldrick, G. M.: SHELXT – Integrated space-group and crystal-structure determination. Acta Crystallogr. A71 (2015) 3–8.10.1107/S2053273314026370Search in Google Scholar PubMed PubMed Central

4. Sheldrick, G. M.: Crystal structure refinement with SHELXL. Acta Crystallogr. C71 (2015) 3–8.10.1107/S2053229614024218Search in Google Scholar PubMed PubMed Central

5. Yu, X.; Feng, G.; Huang, J. L.; Xu, H.: Evaluation of some quinoline-based hydrazone derivatives as insecticidal agents. RSC Adv. 6 (2016) 30405–30411.10.1039/C6RA00993JSearch in Google Scholar

6. Che, Z. P.; Huang, N.; Yu, X.; Yang, L. M.; Ran, J. Q.; Zhi, X. Y.; Xu, H.; Zheng, Y. T.: Microwave-assisted combinatorial synthesis of 2-alkyl-2-(N-arylsulfonylindol-3-yl)-3-N-acyl-5-aryl-1,3,4-oxadiazolines as anti-HIV-1 agents. Comb. Chem. High Throughput Screen. 16 (2013) 400–407.10.2174/1386207311316050005Search in Google Scholar PubMed

7. Naveena, C. S.; Boja, P.; Manjunath, K.; Arulmoli, T.; Shalini, S.: Synthesis, characterization and antimicrobial activity of some 2,5-disubstituted-3-acetyl-[1,3,4]-oxadiazoles carrying 2-(aryloxymethyl) phenyl moiety. Der Pharma Chem. 3 (2011) 247–257.Search in Google Scholar

8. Grishko, V. V.; Tolmacheva, I. A.; Galaiko, N. V.; Pereslavceva, A. V.; Anikina, L. V.; Volkova, L. V.; Bachmetyev, B. A.; Slepukhin, P. A.: Synthesis, transformation and biological evaluation of 2,3-secotriterpene acetylhydrazones and their derivatives. Eur. J. Med. Chem. 68 (2013) 203–211.10.1016/j.ejmech.2013.07.016Search in Google Scholar PubMed

Received: 2020-04-05
Accepted: 2020-04-20
Published Online: 2020-07-10
Published in Print: 2020-08-26

©2020 Xiang Yu et al., published by De Gruyter, Berlin/Boston

This work is licensed under the Creative Commons Attribution 4.0 International License.

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  80. Crystal structure of [(Z)-O-isopropyl N-(4-nitrophenyl)thiocarbamato-κS]-(triphenylphosphine-κP)-gold(I), C28H26AuN2O3PS
  81. Crystal structure of [O-ethyl N-(4-nitrophenyl)thiocarbamato-κS](tri-4-tolylphosphine-κP)gold(I) tetrahydrofuran solvate, C30H30AuN2O3PS, C4H8O
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