Startseite Naturwissenschaften Crystal stucture of 3-benzamido-N-(2-bromo-4-(perfluoropropan-2-yl)-6-(trifluoromethyl)phenyl)-2-fluorobenzamide
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Crystal stucture of 3-benzamido-N-(2-bromo-4-(perfluoropropan-2-yl)-6-(trifluoromethyl)phenyl)-2-fluorobenzamide

  • Haiyan Zhang ORCID logo EMAIL logo und Kai Fu ORCID logo
Veröffentlicht/Copyright: 23. Juli 2024

Abstract

C24H12BrF11N2O2, M = 648.26 g/mol, triclinic, P1̄ (no. 2), a = 8.9871(10) Å, b = 9.6519(10) Å, c = 13.8769(13) Å, α = 88.141(3)°, β = 83.049(3)°, γ = 87.821(4)°, V = 1193.5(2) Å3, Z = 2, R gt (F) = 0.0604, wR ref (F2) = 0.1624, T = 170 K.

CCDC no.: 2359275

The molecular structure is shown in the figure. Table 1 contains crystallographic data and Table 2 contains the list of the atoms including atomic coordinates and displacement parameters.

Table 1:

Data collection and handling.

Crystal: Colourless block
Size: 0.15 × 0.08 × 0.06 mm
Wavelength:

μ:
Mo Kα radiation (0.71073 Å)

1.84 mm−1
Diffractometer, scan mode:

θmax, completeness:
Bruker D8 VENTURE, φ and ω

26.4°, 97 %
N(hkl)measured, N(hkl)unique, Rint: 9335, 4842, 0.098
Criterion for Iobs, N(hkl)gt: Iobs > 2σ(Iobs), 3721
N(param)refined: 407
Programs: SHELX, 1 Olex2, 2 CrysAlisPRO 3
Table 2:

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2).

Atom x y z Uiso*/Ueq
Br1 −0.09187 (8) 0.17966 (8) 0.58655 (5) 0.0583 (2)
Br2 0.3300 (10) 0.227 (2) 0.8431 (14) 0.0659 (17)
C1 1.0185 (6) 0.2881 (6) 0.3067 (4) 0.0522 (10)
C2 1.0616 (7) 0.3975 (6) 0.3598 (5) 0.0558 (11)
H2A 0.994257 0.434002 0.411637 0.067*
C3 1.2028 (7) 0.4530 (7) 0.3371 (5) 0.0628 (12)
H3 1.233277 0.524294 0.375318 0.075*
C4 1.2983 (7) 0.4046 (7) 0.2593 (5) 0.0663 (12)
H4 1.393292 0.444510 0.242773 0.080*
C5 1.2562 (7) 0.2980 (7) 0.2051 (5) 0.0664 (12)
H5 1.321295 0.265701 0.150726 0.080*
C6 1.1190 (7) 0.2391 (7) 0.2306 (5) 0.0603 (11)
H6 1.092746 0.162968 0.195147 0.072*
C7 0.8758 (6) 0.2173 (6) 0.3316 (4) 0.0508 (10)
C8 0.6104 (6) 0.2374 (5) 0.3954 (4) 0.0477 (9)
C9 0.5209 (6) 0.2809 (5) 0.4776 (4) 0.0465 (9)
C10 0.3805 (6) 0.2290 (5) 0.5061 (4) 0.0475 (9)
C11 0.3310 (7) 0.1268 (6) 0.4504 (4) 0.0518 (10)
H11 0.236758 0.086624 0.469775 0.062*
C12 0.4169 (7) 0.0835 (6) 0.3677 (4) 0.0538 (11)
H12 0.380919 0.014566 0.329968 0.065*
C13 0.5558 (6) 0.1390 (6) 0.3385 (4) 0.0516 (10)
H13 0.613338 0.110134 0.280216 0.062*
C14 0.2819 (6) 0.2815 (5) 0.5921 (4) 0.0474 (9)
C15 0.1062 (6) 0.2094 (5) 0.7285 (4) 0.0478 (9)
C16 0.1378 (6) 0.2314 (6) 0.8229 (4) 0.0508 (9)
C17 0.0232 (6) 0.2520 (6) 0.8983 (4) 0.0511 (10)
H17 0.046296 0.265304 0.962306 0.061*
C18 −0.1250 (6) 0.2529 (6) 0.8796 (4) 0.0512 (10)
C19 −0.1608 (6) 0.2326 (6) 0.7871 (4) 0.0508 (10)
C20 −0.0451 (6) 0.2096 (6) 0.7121 (4) 0.0482 (9)
C21 −0.2537 (7) 0.2701 (7) 0.9598 (4) 0.0583 (9)
C22 −0.2351 (8) 0.3857 (8) 1.0307 (5) 0.0699 (12)
C23 −0.2909 (8) 0.1308 (8) 1.0116 (5) 0.0717 (12)
C24 0.3029 (10) 0.237 (2) 0.8455 (15) 0.0597 (14)
C25 −0.108 (3) 0.187 (3) 0.6074 (14) 0.0524 (19)
F1 0.5747 (3) 0.3747 (3) 0.5330 (2) 0.0530 (7)
F2 0.3761 (4) 0.1157 (4) 0.8169 (3) 0.0658 (10)
F3 0.3732 (4) 0.3365 (4) 0.7982 (3) 0.0642 (9)
F4 0.3087 (4) 0.2439 (4) 0.9382 (3) 0.0633 (9)
F5 −0.3825 (4) 0.3124 (4) 0.9201 (3) 0.0729 (10)
F6 −0.3281 (6) 0.0431 (5) 0.9494 (4) 0.1007 (14)
F7 −0.4033 (5) 0.1423 (5) 1.0822 (3) 0.0864 (12)
F8 −0.1733 (5) 0.0778 (5) 1.0508 (4) 0.0958 (13)
F9 −0.3629 (5) 0.4164 (5) 1.0843 (3) 0.0908 (12)
F10 −0.1864 (5) 0.4974 (5) 0.9830 (4) 0.0935 (12)
F11 −0.1351 (5) 0.3471 (6) 1.0912 (3) 0.0927 (12)
F26 −0.248 (3) 0.200 (3) 0.614 (2) 0.054 (3)
F27 −0.047 (4) 0.281 (3) 0.552 (2) 0.052 (3)
F28 −0.056 (3) 0.068 (3) 0.587 (2) 0.053 (3)
N1 0.7541 (5) 0.2936 (5) 0.3696 (3) 0.0488 (9)
H1 0.764732 0.382359 0.378699 0.059*
N2 0.2208 (5) 0.1816 (5) 0.6524 (3) 0.0480 (9)
H2 0.253786 0.095344 0.643978 0.058*
O1 0.8696 (5) 0.0932 (4) 0.3167 (4) 0.0675 (11)
O2 0.2555 (5) 0.4058 (4) 0.6062 (3) 0.0574 (9)

1 Source of material

The title compound was prepared according to the known procedure in 2 steps with 2-bromo-6-iodo-4-(perfluoropropan-2-yl)aniline and 3-benzamido-2-fluorobenzoyl chloride as starting material affording the product as a white solid. 4 The crude product was recrystallized from ethyl acetate as crystals suitable for X–ray diffraction analysis.

2 Experimental details

All the Friedel pairs were merged. 1 3 All H atoms were positioned geometrically and treated as riding, with C–H bond lengths constrained to 0.95° for aryl H atoms, 0.88° for nitric H atoms, and with U iso (H) = 1.2 U eq (C) for aryl H atoms, and nitric H atoms.

3 Comment

X–ray diffraction structure analysis is a powerful tool to determine the structure of solid products. The structure of the corresponding desmethyl-broflanilide was chemically named as 3-benzamido–N-(2-bromo-4-(perfluoropropan-2-yl)-6-(trifluoromethyl)phenyl)-2-fluorobenzamide which was the active metabolite of broflanilide, a novel site in the M3 region of drosophila resistant-to-dieldrin (RDL) γ--aminobutyric acid (GABA) receptor, inhibiting the permeation of chloride ions and GABA-induced neuroactivity and thus resulting in hyperexcitation and death. 5 7 Here we report the crystal structure of the title compound. In the crystal stucture, the crystal packing is stabilized in layers and held together by van der Waals forces. Geometric parameters of the bonds are in the expected ranges. 8


Corresponding author: Haiyan Zhang, School of Chemistry and Chemical Engineering, North University of China, Shanxi Province, Taiyuan, P.R. China, E-mail:

  1. Author contributions: All the authors have accepted responsibility for the entire content of this submitted manuscript and approved submission.

  2. Research funding: This work was supported by the Applied Basic Research Programs of Shanxi Province of China (Grant No. 202203021222026).

  3. Competing interests: The authors declare no conflicts of interest regarding this article.

References

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Received: 2024-04-18
Accepted: 2024-05-30
Published Online: 2024-07-23
Published in Print: 2024-10-28

© 2024 the author(s), published by De Gruyter, Berlin/Boston

This work is licensed under the Creative Commons Attribution 4.0 International License.

Artikel in diesem Heft

  1. Frontmatter
  2. Editorial
  3. Editorial 2024 – New developments and changes of Zeitschrift für Kristallographie – New Crystal Structures
  4. New Crystal Structures
  5. Hydrogen bonding and π⋅⋅⋅halogen interactions in the crystal structure of bis(theophyllinium) hexachloridoplatinate(IV) monohydrate
  6. The crystal structure of 6-amino-2-carboxypyridin-1-ium perchlorate, C6H7ClN2O6
  7. Crystal structure of poly[(μ4-(3-amino-1H-1,2,4-triazol-1-yl)benzene-1,3-dicarboxylato-κ 4 N:O:O':O')(1-methylpyrroldin-2-one-κ1O)dicopper(II)] – 1-methylpyrroldin-2-one (1/3), C40H48Cu2N12O12
  8. The crystal structure of 18-crown-6-k6O6(2,4,5-trinitroimidazol-1-ido-k1O)potassium(I)
  9. Crystal structure of poly[tetraaqua-bis(μ2-5-bromoisophthalato-κ3O,O:O)-(μ2-1,5-bis(imidazol-2-methyl)pentane-κ2N:N)dicadmium(II)] dihydrate
  10. Crystal structure of (5R,6S,E)-5-acetoxy-2-methyl-6-((2aR,3R,5aS,5bS,11aR,12aS)-2a,5a,8,8-tetramethyl-9-oxotetradecahydro-1H,12H-cyclopenta[a]cyclopropa[e]phenanthren-3-yl)hept-2-enoic acid, C32H48O5
  11. The crystal structure of poly[diaqua-bis(μ2 -thiocyanato-κ2N:O)cobalt(II) monohydrate
  12. The crystal structure of 1,3,5-tri(1H-imidazol-1-yl)benzene–2,3,5,6-tetrachlorobenzene-1,4-dicarboxylic acid (1/1)
  13. Crystal structure of dichlorido-bis(1-[(2-ethyl-benzimidazole-1-yl)methyl]-1H–benzotriazole) cadmium(II), C32H32CdN10OCl2
  14. The crystal structure of N′-(tert-butyl)-N′-(3,5-dimethylbenzoyl)-3-methoxy-N,2-dimethylbenzohydrazide, C23H30N2O3
  15. Crystal stucture of 3-benzamido-N-(2-bromo-4-(perfluoropropan-2-yl)-6-(trifluoromethyl)phenyl)-2-fluorobenzamide
  16. Crystal structure of bis(μ-benzeneselenolato)-(tetracarbonyl)-{μ-[N-(diphenylphosphanyl)-N-(3-ethynylphenyl)-P,P-diphenylphosphinous amide]} diiron, C48H35Fe2NO4P2Se2
  17. The crystal structure of 2′-(p-tolyl)-4′H-spiro[isochromane-1,1′-naphthalene]-3,4′-dione, C25H18O3
  18. The crystal structure of poly[hexaqua-tetrakis(μ4-pyridine-2,4-dicarboxylate-κ5N: O: O′: O″: O‴)-bi(μ2-pyridine-2,4-dicarboxylate-κ3N: O: O′)-digadolinium(III)tricopper (II)], [Gd2Cu3(C7H3NO4)6(H2O)6] n
  19. Crystal structure of poly[bis(4-(4-(pyridin-4-yl)phenyl)pyridin-1-ium-κ1N)-(μ4-benzene-1,2,4,5-tetracarboxylato-κ5O:O′: O″:O‴:O⁗)-(μ2-2,5-dicarboxyterephthalato-κ2O:O′)dizinc(II)], C52H32N4O16Zn2
  20. The crystal structure of 4-(3-carboxy-1-ethyl-6-fluoro-4-oxo-1,4-dihydroquinolin-7-yl)piperazin-1-ium 2-carboxy-6-nitrobenzoate monohydrate, C24H25FN4O10
  21. Crystal structure of dichlorido-(1-((3,5-dimethyl-2,3-dihydro-1H-1,2,3-triazol-1-yl)methyl)-1H-benzo[d][1,2,3]triazole-k1N)zinc(II), C22H24ZnN12Cl2
  22. The crystal structure of (3-chlorothiophene-2-carboxylato-κ2O, O′)-(2,2′-dipyridyl-κ2N,N′)lead(II), C20H12Cl2N2O4S2Pb
  23. Synthesis and crystal structure of (Z)-4-((1-(3-fluorophenyl)-1H-1,2,3-triazol-4-yl)methylene)-5-methyl-2-phenyl-2,4-dihydro-3H-pyrazol-3-one, C19H14FN5O
  24. The crystal structure of the coordination compound catena-poly[(18-crown-6-ether-κ6O6)(4,5-dinitroimidazolato-κ1O)potassium(I)]
  25. Crystal structure of 7-(diethylamino)-3-(trifluoroacetyl)-2H-chromen-2-one, C15H14F3NO3
  26. Crystal structure of dichlorido-1-[(2-ethylimidazole-1-yl)methyl]-1H–benzotriazole κ1N zinc(II), C24H26ZnN10Cl2
  27. Crystal and molecular structure of 5-bromopyridine-2,3-diamine
  28. Crystal structure of catena-poly[bis(μ2-1-(3-carboxyphenyl)-5-methyl-4-oxo-1,4-dihydropyridazine-3-carboxylato-k3-O,O:O)hexaqua-dicobalt tetrahydrate], C26H36N4O20Co2
  29. Crystal structure of thiocyanate-κ1N-bis(μ1-2,6-diformyl-4-methylphenol oxime-κ2N,O)-manganese(III) acetonitrile solvate, C21H21MnN6O6S
  30. The crystal structure of pyrrolidin-1-yl pivalate, C9H13NO4
  31. The crystal structure of 2,2′-(2,2-diphenylethene-1,1-diyl)bis(1,4-dimethoxybenzene), C30H28O4
  32. Crystal structure of bis(benzyltrimethylammonium) tetrathiotungstate(VI), {(C6H5CH2)(CH3)3N}2[WS4]
  33. The crystal structure of ethyl (Z)-2-(ethoxymethylene)-3-oxobutanoate, C9H14O4
  34. The crystal structure of (E)-6-bromo-3,5-dimethyl-2-(1-phenylprop-1-en-2-yl)-3Himidazo[4,5b]pyridine, C17H16BrN3
  35. Crystal structure of (3S,3′S,4R,4′S)-3′-(furan-3-yl)-3-hydroxy-4′-methyl-3,5,6′,7′-tetrahydro-1H,3′H-4,5′-spirobi[isobenzofuran]-1,1′(4′H)-dione-methanol (1/1), C21H22O7
  36. Cocrystal structure of progesterone-isophthalic acid, C25H33O4
  37. The crystal structure of 3-(6-fluoro-1H-indol-3-yl)-1-methylquinoxalin-2(1H)-one, C17H12FN3O
  38. Crystal structure of S-(4-carboxybutyl)- l -cysteine
  39. The cocrystal of 2,2′-(hydrazine-1,1-diyl)bis(1H-imidazole-4,5-dicarbonitrile)– methanol (2/3)
  40. Crystal structure of (1′R,2′S,4′R,6′S)-4,6-dihydroxy-1′,8′,8′-trimethyl-3-(3-methylbutanoyl)-4′,8′,6′,1′,7,2′-hexahydro-1H-4′,6′-methanoxanthene-8-carbaldehyde, C23H30O5
  41. Crystal structure of (3,6-di(2-pyridyl)-4-methylphenyl pyridazine-k 2 N,N′)-bis(1-phenyl-pyrazole-κ 2 C,N) iridium(III) hexafluorophosphate, C39H29F6IrN8P
  42. Crystal structure of 1,5-bis[(E)-1-(2-hydroxyphenyl)ethylidene]thiocarbonohydrazide dimethyl sulfoxide monosolvate, C17H18N4O2S·C2H6OS
  43. Crystal structure of (S)-4-(2-(4-(2-acetyl-5-chlorophenyl)-3-methoxy-6-oxopyridazin-1(6H)-yl)-3-phenylpropanamido)benzoic acid monohydrate, C29H26ClN3O7
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  46. Crystal structure of 1-(5-(benzo[d][1,3]dioxol-5-yl)-4-benzyl-1-(4-bromophenyl)-4,5-dihydro-1H-1,2,4-triazol-3-yl)ethan-1-one, C24H20BrN3O3
  47. The crystal structure of (Z)-3′-(2-(1-(3,4-dimethyl-phenyl)-3-methyl-5-oxo-1,5-dihydro-4H-pyrazol-4-ylidene)hydrazinyl)-2′-hydroxy-[1,1′-biphenyl]-3-carboxylicacid ─ methanol (1/1), C26H26N4O5
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  49. Synthesis and crystal structure of methyl 2-((5-bromo-4-(4-cyclopropylnaphthalen-1-yl)-4H-1,2,4-triazol-3-yl)thio)acetate, C18H16BrN3O2S
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  51. Crystal structure of 1,8-dihydroxy-3-{[(triphenylstannyl)oxy]carbonyl} anthracene-9,10-dione, C33H22O6Sn
  52. The crystal structure of (E)-4-(2-(pyridin-4-ylmethylene)hydrazine-1-carbonyl)pyridin-1-ium-2-olate dihydrate, C12H14N4O4
  53. The crystal structure of 6-amino-pyridinium-2-carboxylate, C6H6N2O2
  54. The crystal structure of catena-poly[aqua-nitrato-κ3O,O:O′′-(1,10-phenanthroline-κ2N,N)sodium(I)], C24H18N6O7Na2
  55. Retractions
  56. Retraction of: Crystal structure of bis[diaquaisonicotinatosamarium(III)]-µ-isonicotinato-[diisonicotinatocopper(II)], CuSm2(C6H4NO2)8(H2O)4
  57. Retraction of: Crystal structure of aqua(2,2-bipyridine-k 2 N:N′)(nitrato)-(4-aminobenzoato)cadmium(II) nitrate, [Cd(H2O)(NO3)(C10H8N2)(C7H7NO2)][NO3]
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