Startseite The crystal structure of 2,6-di-tert-butyl-4-(4-(methylthio)benzylidene)cyclohexa-2,5-dien-1-one, C22H28OS
Artikel Open Access

The crystal structure of 2,6-di-tert-butyl-4-(4-(methylthio)benzylidene)cyclohexa-2,5-dien-1-one, C22H28OS

  • Xiaofan Bai ORCID logo , Ziwen Zhang , Wei Guo ORCID logo , Yongkang Zhang , Liqiang Zhang , Huihui Liu , Haixia Wu EMAIL logo und Yong Li EMAIL logo
Veröffentlicht/Copyright: 5. Oktober 2022

Abstract

C22H28OS, monoclinic, P21/n (no. 14), a = 6.7729(3) Å, b = 17.3973(6) Å, c = 16.6277(6) Å, β = 92.380(3)°, V = 1957.55(13) Å3, Z = 4, R gt(F) = 0.041, wR ref(F 2) = 0.100, T = 90 K.

CCDC no.: 2174516

The molecular structure is shown in the figure. Table 1 contains crystallographic data and Table 2 contains the list of the atoms including atomic coordinates and displacement parameters.

Table 1:

Data collection and handling.

Crystal: Block, colorless
Size: 0.12 × 0.11 × 0.11 mm
Wavelength: Mo Kα radiation (0.71073 Å)
μ: 0.17 mm−1
Diffractometer, scan mode: ROD, Synergy Custom DW system, φ and ω-scans
θ max, completeness: 29.3°, >99%
N(hkl)measured, N(hkl)unique, R int: 14307, 4301, 0.030
Criterion for I obs, N(hkl)gt: I obs > 2 σ(I obs), 3558
N(param)refined: 224
Programs: CrysAlisPRO [1], OLEX-II [2], SHELX [3, 4]
Table 2:

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2).

x y z U iso*/U eq
S1 0.00756 (6) 0.65263 (2) 0.64058 (2) 0.02640 (12)
O1 1.15916 (17) 0.71746 (6) 0.23651 (7) 0.0277 (3)
C1 1.0309 (2) 0.68243 (8) 0.27213 (8) 0.0188 (3)
C2 0.9601 (2) 0.60623 (8) 0.24299 (8) 0.0184 (3)
C3 0.9387 (2) 0.71763 (8) 0.34295 (8) 0.0168 (3)
C4 0.8152 (2) 0.57147 (8) 0.28237 (8) 0.0199 (3)
H4 0.772509 0.522082 0.264554 0.024*
C5 0.7880 (2) 0.68036 (8) 0.37669 (8) 0.0181 (3)
H5 0.723464 0.704559 0.419556 0.022*
C6 0.7208 (2) 0.60531 (8) 0.35044 (8) 0.0185 (3)
C7 0.5714 (2) 0.56579 (8) 0.38399 (8) 0.0199 (3)
H7 0.543471 0.516896 0.360749 0.024*
C8 0.4476 (2) 0.58714 (8) 0.45024 (8) 0.0186 (3)
C9 0.2497 (2) 0.56358 (8) 0.44567 (9) 0.0200 (3)
H9 0.204160 0.532010 0.402126 0.024*
C10 0.5122 (2) 0.62896 (8) 0.51841 (8) 0.0196 (3)
H10 0.647227 0.643473 0.524366 0.023*
C11 0.3836 (2) 0.64959 (8) 0.57724 (8) 0.0198 (3)
H11 0.430954 0.677793 0.623002 0.024*
C12 0.1193 (2) 0.58535 (8) 0.50327 (9) 0.0199 (3)
H12 −0.015438 0.570418 0.497649 0.024*
C13 0.1839 (2) 0.62901 (8) 0.56949 (9) 0.0196 (3)
C14 0.0916 (2) 0.74458 (9) 0.67660 (10) 0.0288 (4)
H14A 0.101660 0.779940 0.631077 0.043*
H14B 0.221603 0.738947 0.704103 0.043*
H14C −0.002480 0.765121 0.714324 0.043*
C15 1.0521 (2) 0.57099 (8) 0.16859 (9) 0.0222 (3)
C16 0.9608 (3) 0.49260 (9) 0.14774 (10) 0.0314 (4)
H16A 0.983176 0.457429 0.193242 0.047*
H16B 1.022333 0.471621 0.100157 0.047*
H16C 0.818445 0.498591 0.136477 0.047*
C17 1.0151 (3) 0.62373 (9) 0.09509 (9) 0.0314 (4)
H17A 0.872583 0.630748 0.085230 0.047*
H17B 1.071769 0.600240 0.047698 0.047*
H17C 1.077455 0.673771 0.105578 0.047*
C18 1.2742 (3) 0.55909 (10) 0.18434 (11) 0.0319 (4)
H18A 1.336514 0.608385 0.198411 0.048*
H18B 1.332147 0.538474 0.135811 0.048*
H18C 1.296039 0.522789 0.228890 0.048*
C19 1.0153 (2) 0.79546 (8) 0.37396 (8) 0.0207 (3)
C20 0.9893 (3) 0.85790 (8) 0.30874 (9) 0.0249 (3)
H20A 1.070696 0.845183 0.263214 0.037*
H20B 1.030594 0.907734 0.331191 0.037*
H20C 0.850160 0.860531 0.290301 0.037*
C21 1.2348 (3) 0.78843 (9) 0.40011 (10) 0.0291 (4)
H21A 1.250867 0.748615 0.441559 0.044*
H21B 1.282185 0.837730 0.421912 0.044*
H21C 1.311282 0.774464 0.353547 0.044*
C22 0.9018 (3) 0.82178 (9) 0.44694 (10) 0.0319 (4)
H22A 0.762170 0.829009 0.430952 0.048*
H22B 0.957146 0.870448 0.467216 0.048*
H22C 0.913665 0.782704 0.489323 0.048*

Source of material

All chemicals and solvents are analytical grade. The starting materials 2,6-di-tert-butylphenol (0.1 mmol, 1.0 eq) and 4–methylsulfanyl-benzaldehyde (0.13 mmol, 1.3 eq) were mixed, dissolved in toluene (0.25 M), and then placed in a Dean–Stark device for sonication for 15 min. The reaction was heated at 393 K. Piperidine (2 eq) was added dropwise to the reaction at a constant speed within 3 h. After the reaction was completed, the temperature was adjusted to 383 K, and an appropriate amount of acetic acid anhydride was added. After 15 min, the reaction solution was poured into ice water. Extract with dichloromethane (25 mL × 3). The organic phases were combined, dried over anhydrous Na2SO4, the organic phase was concentrated under reduced pressure, and the residue was purified by column chromatography using petroleum ether as eluent to obtain the product with a yield of 91.3%. The product was dissolved with an appropriate amount of methanol at room temperature, and the title compound was obtained as crystals after slowly evaporating the solvent.

Experimental details

Using Olex2 [2], the structure was solved with the SHELXT [3] structure solution program and refined with the SHELXL [4] refinement package. All H atoms were positioned geometrically and treated as riding, and U iso was fixed at 1.2 times of C(H) groups and at 1.5 times of C(H, H, H) groups.

Discussion

The p-quinone methides is a unique class of compounds with two α, β-unsaturated carbonyl groups [5]. It is a widely used intermediate in many chemical, pharmaceutical and biosynthesis [6, 7]. The structure of cyclohexenone and exocyclic conjugated double bonds endows it with aromatization and electron-deficient driving forces [8, 9], thus exhibiting unique electrophilic reactivity and prone to 1,6-addition reactions, and has good research value. Such compounds [10] can be extracted from natural products by biological and chemical methods, or they can be directly synthesized by chemical methods [11, 12]. The presence of the electrophilic methylthio group in the title compound makes it more susceptible to 1,6-addition reaction, thereby enhancing the activity of this class of compounds. Many similar crystal structures have been reported [13], [14], [15], [16]. The structures of the compounds were identified by NMR and X-ray diffraction.

The unit contains one molecule, as shown in the figure, two tert-butyl groups replace the two hydrogen atoms at the C2 and C3 positions, respectively, and the electrophilic methylthio group replaces the hydrogen atom at the C13 position. The bond lengths and bond angles of this structure are within reasonable ranges [17]. The cyclohexadiene plane (C1–C2–C4–C6–C5–C3) and the benzene ring plane (C8–C9–C12–C13–C11–C10) make an angle of 37.46°. The bond lengths of O1–C1, C14–S1, C13–S1 are 1.233(18), 1.793(16), 1.763(15) Angström, respectively. The torsion angles of C6–C7–C8–C9, C6–C7–C8–C10, C14–S1–C13–C11 are 144.56(15)°, −35.95(2)°, and 33.94(14)°. The angle of C14–S1–C13 is 102.56(7)°. The distance from O1 to the plane of the benzene ring (C8–C9–C12–C13–C11–C10) is 2.763 Angström, and the distance of S1 to the cyclohexadiene plane (C1–C2–C4–C6–C5–C3) is 0.561 Angström.


Corresponding authors: Haixia Wu, College of Chemical and Pharmaceutical Engineering, Hebei University of Science and Technology, #26 Yuxiang Street, Yuhua District, Shijiazhuang, 050018, China, E-mail: ; and Yong Li, College of Chemical and Pharmaceutical Engineering, Hebei University of Science and Technology, #26 Yuxiang Street, Yuhua District, Shijiazhuang, 050018, China; and Shijiazhuang No. 4 Pharmaceutical Co. Ltd, Quality & Technology Center, No. 288, Zhujiang Road, Hi-Tech industrial and Development Zone, Shijiazhuang, 050000, China, E-mail:

Award Identifier / Grant number: 16214016

  1. Author contributions: Xiaofan Bai: Writing–Original Draft; Ziwen Zhang: Methodology and Conceptualization; Wei Guo: Formal analysis; Yongkang Zhang: Visualization; Liqiang Zhang and Huihui Liu: Data Curation; Haixia Wu: Writing–Review and Editing; Yong Li: Supervision. All the authors have accepted responsibility for the entire content of this submitted manuscript and approved submission.

  2. Research funding: This work was supported by Hebei Province Science and Technology Support Program (No. 16214016).

  3. Conflict of interest statement: The authors declare no conflicts of interest regarding this article.

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Received: 2022-09-02
Accepted: 2022-09-21
Published Online: 2022-10-05
Published in Print: 2022-12-16

© 2022 the author(s), published by De Gruyter, Berlin/Boston

This work is licensed under the Creative Commons Attribution 4.0 International License.

Artikel in diesem Heft

  1. Frontmatter
  2. New Crystal Structures
  3. The crystal structure of 1,5-bis(4-chlorophenyl)-3-(3-methylphenyl)pentane- 1,5-dione, C48H40Cl4O4
  4. Crystal structure of (bis(1,10-phenanthroline-κ 2 N,N′))-(3,5-dinitrosalicylato-κ 2 O,O′)nickel(II), C31H18N6NiO7
  5. Crystal structure of {N,N′-bis(4-fluoro-salicylaldehyde)-3,6-dioxa-1,8-diaminooctane-κ4 O,N,N′,O′}zinc(II), C20H20F2N2O4Zn
  6. [5-Bromo-2-(2-(dimethylamino)ethyliminomethyl)phenolato-κ3 N,N′,O]-isothiocyanato-nickel(II), C12H14BrN3NiOS
  7. Crystal structure of 9-bromo-4-(6-methoxypyridin-2-yl)-5,6-dihydrobenzo[h]quinazolin- 2-amine, C18H15BrN4O
  8. The crystal structure of imidazolium nitrate, C3H5O3N3
  9. Crystal structure of diiodido-bis(6,6′-dimethoxy-2,2′-(ethane-1,2-diylbis(nitrilomethanylylidene)) diphenolato)tricadmium(II), C36H36Cd3I2N4O8
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  13. Crystal structure of N 2,N 6-bis(2-(((E)-quinolin-8-ylmethylene)amino)phenyl)pyridine-2,6-dicarboxamide, C39H27N7O2
  14. An I 6 2 anion in the crystal structure of theophyllinium triiodide monohydrate, C7H11I3N4O3
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  16. The crystal structure of (carbonato κ2 O,O′)(2-oxopyridin-1(2H)-olato-κN)tris(trimethylphosphine)rhodium(III) water solvate, C15H33NO5P3Rh
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  18. Synthesis and crystal structure of 3-(((7-hydroxy-3-(4-hydroxy-3,5-dinitrophenyl)-4-oxo-4H-chromen-8-yl)methyl)(nitroso)amino)propanoic acid, C19H14N4O11
  19. The crystal structure of 3-((4-chloro-N-(2-methoxyethyl)benzamido)methyl)phenyl methanesulfonate, C18H20ClNO5S
  20. Crystal structure of di([1,1′:3′,1″-terphenyl]-2′-yl)tellane, C36H26Te
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  22. Crystal structure of N′,N‴-((1E,2E)-1,2-diphenylethane-1,2-diylidene)bis(4-methylbenzohydrazide) – water – methanol (1/1/1), C31H32N4O4
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  24. Crystal structure of 3,5,6,7-tetramethoxy-3′,4′-methylenedioxy-flavone, C20H18O8
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  26. The crystal structure of 3,5-bis(propan-2-yl)-1H-pyrazol-4-amine, C9H17N3
  27. Crystal structure of [(1,4,7,10-tetraoxacyclododecane-κ 4 O,O′,O″, O‴)-tris(nitrato-κ 2 O,O′)gadolinium(III)], C8H16N3O13Gd
  28. The crystal structure of 2,2′-((pyridine-2,6-diylbis(methylene))bis(sulfanediyl))-bis(4,5-dihydro-1H-imidazol-3-ium) bromide, C13H19Br2N5S2
  29. Crystal structure of E-2-chloro-N′-(1-(5-chloro-2-hydroxyphenyl)propylidene)benzohydrazide, C16H14Cl2N2O2
  30. Crystal structure of 3-(adamantan-1-yl)-4-methyl-5-{[(4-nitrophenyl)methyl]sulfanyl}-4H-1,2,4-triazole, C20H24N4O2S
  31. The crystal structure of dimethanol-κ1O-(5,10,15,20-tetrakis(4-nitrophenyl)porphyrin-21,23-diido-κ4 O,O′,O″,O′″)manganese(III) trans-dicyanido-κ1C-bis(acetylacetonato-κ2 O,O′)ruthenium(III), C58H46N10O14RuMn
  32. The crystal structure of nitroxyl-κ N-{hydridotris(3-trifluoromethyl-5-methylpyrazolyl-1-yl-κN 3)borato}nickel(II), C15H13BF9N7NiO
  33. The crystal structure of [(2,2′-bipyridine-κ2 N,N)-bis(6-phenylpyridine-2-carboxylato- κ2 N,O)nickel(II)] monohydrate, C34H26N4O5Ni
  34. The crystal structure of 5-(2-fluoro-3-methoxyphenyl)-1-(2-fluoro-6-(trifluoromethyl)benzyl)-6-methylpyrimidine-2,4(1H,3H)-dione, C20H15F5N2O3
  35. The crystal structure of ethyl 2,3,5-trifluoro-4-(4-oxo-3,4-dihydropyridin-1(2H)-yl)benzoate, C14H12F3NO3
  36. [2,2′-{Ethane-1,2-diylbis[(azanylylidene)methanylylidene]}bis(3-bromo-2-hydroxyphenyl)]iron(III) nitrate, C20H12Br2CuN2O2
  37. The crystal structure of 1-(2-iodophenyl)-4-phenyl-1H-1,2,3-triazole, C14H10IN3
  38. Synthesis and crystal structure of 2-(2-oxo-2-(thiophen-2-yl)ethyl)-4H-chromen-4-one, C15H10O3S
  39. {6,6′-((1E,1′E)-((2,2-dimethylpropane-1,3-diyl)bis(azaneylylidene))bis(methaneylylidene))bis(2-bromo-4-chlorophenolate)-κ4N,N′,O,O′}copper(II), C19H16Br2Cl2CuN2O2
  40. The crystal structure of N′-[bis(2-hydroxyphenyl)methylidene]pyridine-4-carbohydrazide, C19H15N3O3
  41. Crystal structure of 2-chloro-6-formylphenolato-κ2O,O′-(6,6′-(((2,2-dimethylpropane-1,3-diyl)bis(azaneylylidene))bis(methaneylylidene))bis(2-chlorophenolato)κ4 N,N,O,O′)cobalt(III), C26H22Cl3CoN2O4
  42. The crystal structure of tetrakis(6-phenylpyridine-2-carboxylate-κ 2 N,O)-bis(μ2-6-phenylpyridine-2-carboxylate-κ 2 O:O′)-bis(μ2-6-phenylpyridine-2-carboxylate-κ 3N,O:O)tetralead(II) C48H32N4O8Pb2
  43. The crystal structure of 3,7-dihydroxy-9-methoxy-4a-methyl-4aH-benzo[c] chromene-2,6-dione —dichloromethane (1/1), C16H14Cl2O6
  44. The crystal structure of (Z)-6-(((5-chloro-2-hydroxyphenyl)amino)methylene)- 4-nitrocyclohexa, C13H9ClN2O4
  45. Crystal structure of dichlorido-tetra((E)-(RS)-1-(2,4-dichlorophenyl)-4,4-dimethyl-2-(1,2,4-triazol-1-yl)pent-1-en-3-ol-κ1 N)zinc(II), C60H68O4N12Cl10Zn
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  48. Crystal structure of dibromido-tetra((E)-(RS)-1-(2,4-dichlorophenyl)-4,4-dimethyl-2-(1,2,4-triazol-1-yl)pent-1-en-3-ol-κ 1 N)zinc(II), C60H68O4N12Br2Cl8Zn
  49. Crystal structure of tetrasodium-bis(μ 2-oxido)-hexafluoro-didioxo-molybdenum(V), Na2(Mo2O4F6)
  50. Crystal structure of (E)-N′-(2-chloro-6-hydroxybenzylidene)-4- hydroxybenzohydrazide-water (1/1), C14H13Cl1N2O4
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  53. The crystal structure of 2,6-di-tert-butyl-4-(4-(methylthio)benzylidene)cyclohexa-2,5-dien-1-one, C22H28OS
  54. La3.65Mg30Sb1.07 as a disordered derivative of Th2Ni17-type structure
  55. Crystal structure of (E)-N-(4-morpholinophenyl)-1-(quinoxalin-2-yl)methanimine, C19H18N4O
  56. The crystal structure of 2,2′-(1,2-phenylenebis(methylene))bis(1,3-dimethylisothiouronium) bromide, C14H24Br2N4S2
  57. Crystal structure of tetraaqua-bis[4-(1H-1,2,4-triazol-1-yl)benzoato-κ1 N]zinc(II), C18H20ZnN6O8
  58. Crystal structure of bis(tricarbonyl)-{(S)-(tert-butoxycarbonyl)(1-methoxy-1-oxo-3-sulfido-k2 S:S′-propan-2-yl)amido-k2N:N′}diiron(I) (Fe—Fe), C15H15Fe2NO10S
  59. Crystal structure of (E)-3-((4-chlorophenyl)thio)-4-hydroxypent-3-en-2-one, C11H11ClO2S
  60. The crystal structure of (E)-3′,6′-bis(diethylamino)-2-((5-(diethylamino)-2-hydroxybenzylidene)amino)spiro[isoindoline-1,9′-xanthen]-3-one, C39H45N5O3
  61. The crystal structure of 2-(4-methoxynaphthalen-1-yl)-4H-chromen-4-one, C20H14O3
  62. The crystal structure of trans-dichlorido-(ethylenediamine-κ 2 N,N′)-bis(triphenylphosphine-κ 1 P)ruthenium(II), C38H38Cl2N2P2Ru
  63. The double polymeric chain of catena-poly[(μ2-6-bromopyridine-3-carboxylato-κ2 O,O′) (6-bromopyridine-3-carboxylato-κ2 O,O′) (μ2-1,2-bis(4-pyridyl)ethylene-κ2 N:N′)cobalt(II)], C24H16CoBr2N4O4
  64. The crystal structure of tert-butyl 2-(4-(12-bromo [2.2]paracyclophanyl)carbamoyl)pyrrolidine-1-carboxylate, C26H31BrN2O3
  65. The crystal structure of (Z)-2-(2,3-dimethoxybenzylidene)naphtho[1,2-b]furan-3(2H)-one, C21H16O4
  66. Crystal structure of 2-hydroxy-1-tosylindolin-3-yl- 2-naphthoate, C26H21N1S1O5
  67. The crystal structure of 1-methyl-N-(1-methyl-1H-imidazole-2-carbonyl)-1H-imidazole-2-carboxamide, C10H11N5O2
  68. The crystal structure of (E)-2-((5-bromo-2-hydroxybenzylidene)amino)-3′,6′-bis(ethylamino)-2′, 7′-dimethylspiro[isoindoline-1,9′-xanthen]-3-one, C33H31BrN4O3
  69. The crystal structure of dimethanol-5,15-diphenylporphyrin-21,23-diido-κ4 N,Nʹ,Nʺ,Nʹʺ-manganese(III) trans-dicyanido-bis(acetylacetonato-κ2O,Oʹ)ruthenium(III), C46H42N6O6RuMn
  70. Crystal structure of 1,4,8,11-tetraazacyclotetradecane-1,8-diium bis(3,5-dicarboxybenzoate), C28H36N4O12
  71. Bifurcated halogen bonds in the crystal structure of 2,2′-bi(1,8-naphthyridine)—1,4-diiodotetrafluorobenzene (1/1), C22H10F4I2N4
Heruntergeladen am 2.10.2025 von https://www.degruyterbrill.com/document/doi/10.1515/ncrs-2022-0442/html?lang=de
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