Home Crystal structure of 2-(furan-2-yl)-5-methyl-1,3-dioxane-5-carboxylic acid, C10H12O5
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Crystal structure of 2-(furan-2-yl)-5-methyl-1,3-dioxane-5-carboxylic acid, C10H12O5

  • Lin Yuan , Xian-You Yuan and Zhong-Yan Li EMAIL logo
Published/Copyright: October 6, 2018

Abstract

C10H12O5, monoclinic, P21/c (no. 14), a = 5.6706(16) Å, b = 32.091(9) Å, c = 6.5636(14) Å, β = 123.733(17)°, V = 993.3(5) Å3, Z = 4, Rgt(F) = 0.0359, wRref(F2) = 0.0893, T = 296(2) K.

CCDC no.: 1867980

The crystal structure is shown in the figure. Tables 1 and 2 contain details on crystal structure and measurement conditions and a list of the atoms including atomic coordinates and displacement parameters.

Table 1:

Data collection and handling.

Crystal:Block
Wavelength:Mo Kα radiation (0.71073 Å)
μ:0.12 mm−1
Diffractometer, scan mode:Bruker APEX-II, φ and ω-scans
θmax, completeness:25°, >99%
N(hkl)measured, N(hkl)unique, Rint:4601, 1734, 0.021
Criterion for Iobs, N(hkl)gt:Iobs > 2 σ(Iobs), 1620
N(param)refined:142
Programs:Bruker programs [1], SHELX [2], OLEX2 [3]
Table 2:

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2).

AtomxyzUiso*/Ueq
O1−0.3698(2)−0.19894(4)−1.2770(2)0.0459(3)
O20.1742(2)−0.13452(3)−0.80129(18)0.0348(3)
O3−0.3163(2)−0.12762(3)−1.00896(18)0.0340(3)
O40.2246(2)−0.03427(4)−0.7735(3)0.0581(4)
O5−0.2418(2)−0.02936(4)−0.9773(2)0.0589(4)
C1−0.0865(3)−0.15549(4)−0.9183(3)0.0324(3)
H1−0.0863−0.1748−0.80270.039*
C2−0.1149(3)−0.17941(4)−1.1250(3)0.0347(4)
C30.0656(4)−0.18872(5)−1.1893(3)0.0435(4)
H30.2511−0.1793−1.11430.052*
C4−0.0824(4)−0.21589(5)−1.3951(3)0.0482(4)
H4−0.0124−0.2278−1.48050.058*
H5−0.229(8)0.0006(13)−1.094(7)0.186(15)*
C5−0.3411(4)−0.22090(5)−1.4410(3)0.0507(5)
H5A−0.4830−0.2371−1.56740.061*
C60.2236(3)−0.11237(5)−0.5907(3)0.0347(4)
H6A0.4026−0.0976−0.51340.042*
H6B0.2358−0.1320−0.47300.042*
C7−0.2948(3)−0.10533(5)−0.8096(3)0.0341(4)
H7A−0.3056−0.1248−0.70210.041*
H7B−0.4521−0.0860−0.87310.041*
C8−0.0156(3)−0.08141(4)−0.6648(3)0.0322(3)
C90.0189(4)−0.06184(6)−0.4358(3)0.0474(4)
H9A0.0184−0.0834−0.33470.071*
H9B−0.1353−0.0430−0.48460.071*
H9C0.1950−0.0469−0.34520.071*
C10−0.0100(3)−0.04637(4)−0.8186(3)0.0337(3)

Source of material

The mixture of 2,2-bis(hydroxymethyl)propionic acid (1.88 g, 14.0 mmol), furan-2-carbaldehyde (1.15 g, 12.0 mmol), cyclohexane (18 mL), N,N-dimethylformamide (5 mL) and p-toluene sulfonic acid (0.12 g, 0.70 mmol) were refluxed with stirring for 3 h. After the mixture was cooled, to room temperature sodium bicarbonate (0.06 g, 0.76 mmol) was added to neutralize p-toluene sulfonic acid and stirred at room temperature for 40 min. The solvent was evaporated under reduced pressure and then ethyl acetate was added to dissolve the residue. The solution was washed with saturated salt water (10 mL*2) and water (10 mL*2), respectively. Then the organic layer was dried with anhydrous sodium sulfate, filtered and evaporated, and the product was recrystallized from ethyl acetate to afford colorless crystals (1.91 g, 9.0 mmol; yield 75%).

Experimental details

All hydrogen atoms were identified in difference Fourier syntheses. The Uiso values of the hydrogen atoms of methyl groups were set to 1.5Ueq(C) and the Uiso values of all other hydrogen atons were set to 1.2Ueq(C).

Discussion

Ketal compounds have a wide range of applications in organic syntheses, that is because they are common used as a protection of carbonyl groups or intermediates [4, 5] . In addition, this type of compounds has insecticidal as well as anti-foaming properties [6]. The crystal structures of some similar 1,3-dioxanes have been reported [7], [8], [9].

In the new formed 1,3-dioxane ring, the bond lengths of O2—C1 and O3—C1 are 1.4026(17) and 1.4109(17) Å, respectively. In the structure, the bond angles of O2—C1—O3, O2—C1—C2 and O3—C1—C2 are 111.85(11)°, 107.12(11)° and 109.62(12)°. The conformation of this central moiety of the title molecule is in accord with the expectations [10].

In the title structure molecules are connected pairwise by their carboxyl group to form the typical hydrogen bonded dimer, which is well known for this class of compounds [9].

Acknowledgements

This work was financially supported by the Natural Science Foundation of Hunan Province of China (2018JJ3193, 2017 J J3093).

References

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2. Sheldrick, G. M.: SHELXT – Integrated space-group and crystal-structure determination. Acta Crystallogr. A71 (2015) 3–8.10.1107/S2053273314026370Search in Google Scholar

3. Dolomanov, O. V.; Bourhis, L. J.; Gildea, R. J.; Howard, J. A. K.; Puschmann, H.: OLEX2: a complete structure solution, refinement and analysis program. J. Appl. Crystallogr. 42 (2009) 339–341.10.1107/S0021889808042726Search in Google Scholar

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Received: 2018-07-29
Accepted: 2018-09-15
Published Online: 2018-10-06
Published in Print: 2018-12-19

©2018 Lin Yuan et al., published by De Gruyter, Berlin/Boston

This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 License.

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