Home Crystal structure of methyl 4-methyl-2,5-di(pyridin-4-yl)-1H-pyrrole-3-carboxylate monohydrate C17H15N3O2⋅H2O
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Crystal structure of methyl 4-methyl-2,5-di(pyridin-4-yl)-1H-pyrrole-3-carboxylate monohydrate C17H15N3O2⋅H2O

  • Chuan-Qi Wang , Xiao-Xia Wang , Xiao-Hu Liu , Bin-Yi Yang , Qi-Di Zhong , Peng-Yu Zhuang EMAIL logo and Hong-Bo Tan
Published/Copyright: October 2, 2018

Abstract

C17H15N3O2⋅H2O, triclinic, P1̄ (no. 2), a = 5.7965(14) Å, b = 11.625(3) Å, c = 12.315(3) Å, α = 76.216(18)°, β = 76.674(18)°, β = 79.158(18)° V = 776.4(3) Å3, Z = 2, Rgt(F) = 0.0608, wRref(F2) = 0.1574, T = 113 K.

CCDC no.: 1843406

The asymmetric unit of the title crystal structure is shown in the figure. Tables 1 and 2 contain details of the measurement method and a list of the atoms including atomic coordinates and displacement parameters.

Table 1:

Data collection and handling.

Crystal:Colourless Triclinic
Size:0.22 × 0.2 × 0.18 mm
Wavelength:Mo Kα radiation (0.71073 Å)
μ:0.9 cm−1
Diffractometer, scan mode:Rigaku XtaLAB P200, φ and ω
2θmax, completeness:55°, >98%
N(hkl)measured, N(hkl)unique, Rint:10002, 3503, 0.1183
Criterion for Iobs, N(hkl)gt:Iobs > 2 σ(Iobs), 2416
N(param)refined:220
Programs:Rigaku [1], SHELX [2]
Table 2:

Hydrogen coordinates and isotropic displacement parameters.

AtomxyzUiso*/Ueq
H12310(30)6438(19)7116(17)0.030(5)
H6−3608840254130.040
H7−4174770439000.043
H82027565537370.040
H92825628452370.035
H10A−20371007154670.047
H10B−18841075564270.047
H10C−3863988666660.047
H12A24041168884950.051
H12B48691097088240.051
H12C23931078496990.051
H141421794899930.038
H1536997028113450.040
H168602554791140.037
H176433638776900.034
H3A7650(50)5720(20)2860(20)0.058
H3B7030(50)5530(20)1870(30)0.058

Source of material

4-Pyridinecarboxaldehyde, ethl acetoacetate and ammonium acetate was added to ethanol under stirring at room temperature and the reaction mixture was refluxed for 8 h. Concentration in vacuum followed by recrystallization from ethanol afforded a white solid.

Experimental details

The Amide hydrogen atom as well as those at water were refined freely. Fixed Uiso at 1.2 times of all C(H) groups, and 1.5 times of all C(H,H,H) groups. The hydrogen atoms attached to carbon were placed on calculated positions with the help of the SHELX program (AFIX 43 or 137 option) [2].

Discussion

To our knowledge the title compound, is known [3, 4] , but was not characterized by X-ray single crystal structure analysis. X-ray crystallography analyses reveal that the title compound is a monohydrate. Characteristic torsion angel are: C3—C4—C13—C14: 36.9°, C2—C1—C5—C6: 27.5°, C2—C3—C11—O1: 32.8°, C10—C2—C3—C11: 6.3°. This indicates a highly rotational freedom of the pyridyl group linked at C1 and C4 (cf. the figure). All the lengths and angles are in the normal range [5].

Acknowledgements

This work was financially supported by the Key Projects in the Hebei Youth Natural Science Foundation (No. H2014209241).

References

Rigaku: RAPID-AUTO. Rigaku Corporation, Tokyo, Japan (1998).Search in Google Scholar

Sheldrick, G. M.: SHELXS-97: Program for the Solution of Crystal Structures. University of Göttingen, Germany (1997).Search in Google Scholar

Zhu, H.; Guo, Y.-Y.; Liu, S.: Crystal structure of diethyl 3,9-diphenyl-6,12-bis(3-methoxyphenyl)-3,9-diazahexacyclo[6.4.0.02,7.04,11.05,10]dodecane-1,11-dicarboxylate, C42H42N2O6. Z. Kristallogr. NCS. 233 (2018) 327–328.10.1515/ncrs-2017-0333Search in Google Scholar

Kawai, A.; Kawai, M.; Murata, Y.: Preparation of pyridylpyrroles as interleukin and tumor necrosis factor antagonists. P. WO 9802430. (1998) Jan 22.Search in Google Scholar

Bakkali, H.; Marie, C.; Ly, A.; Thobie-Gautier, C.; Graton, J.; Pipelier, M.; Sengmany, S.; Léonel, E.; Nédélec, J.-Y.; Evain, M.; Dubreuil, D.: Functionalized 2,5-dipyridinylpyrroles by electrochemical reduction of 3,6-dipyridinylpyridazine precursors. Eur. J. Org. Chem. 12 (2008) 2156–2166.10.1002/ejoc.200701115Search in Google Scholar

Received: 2018-06-24
Accepted: 2018-08-30
Published Online: 2018-10-02
Published in Print: 2018-12-19

©2018 Chuan-Qi Wang et al., published by De Gruyter, Berlin/Boston

This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 License.

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