Home Physical Sciences The crystal structure of dimethanol-5,15-diphenylporphyrin-21,23-diido-κ4 N,Nʹ,Nʺ,Nʹʺ-manganese(III) trans-dicyanido-bis(acetylacetonato-κ2O,Oʹ)ruthenium(III), C46H42N6O6RuMn
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The crystal structure of dimethanol-5,15-diphenylporphyrin-21,23-diido-κ4 N,Nʹ,Nʺ,Nʹʺ-manganese(III) trans-dicyanido-bis(acetylacetonato-κ2O,Oʹ)ruthenium(III), C46H42N6O6RuMn

  • Jianguo Wei ORCID logo EMAIL logo , Qing Yu and Fulin Sun
Published/Copyright: October 20, 2022

Abstract

C46H42N6O6RuMn, triclinic, P 1 (no. 2), a = 8.2340(8) Å, b = 9.7872(10) Å, c = 13.5397(14) Å, α = 83.646(2)°, β = 77.599(2)°, γ = 80.615(2)°, V = 1048.17(18) Å3, Z = 1, R gt (F) = 0.0342, wR ref (F 2) = 0.0910, T = 293 K.

CCDC no.: 2212035

Table 1 contains crystallographic data and Table 2 contains the list of the atoms including atomic coordinates and displacement parameters.

Table 1:

Data collection and handling.

Crystal: Block, dark-red
Size: 0.13 × 0.11 × 0.09 mm
Wavelength: Mo Kα radiation (0.71073 Å)
μ: 0.72 mm−1
Diffractometer, scan mode: Bruker APEX-II, φ and ω-scans
θ max, completeness: 25°, >99%
N(hkl)measured, N(hkl)unique, R int: 5210, 3643, 0.020
Criterion for I obs, N(hkl)gt: I obs > 2 σ(I obs), 3080
N(param)refined: 277
Programs: Bruker programs [1], Shelx [2, 3]
Table 2:

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2).

x y z U iso*/U eq
Ru1 0.500000 0.000000 0.500000 0.03471 (13)
Mn1 1.000000 1.000000 0.000000 0.03594 (17)
O1 0.3664 (2) 0.1740 (2) 0.45071 (16) 0.0445 (5)
O2 0.3878 (2) −0.1164 (2) 0.42926 (15) 0.0440 (5)
O3 0.9620 (3) 0.9134 (2) −0.13892 (16) 0.0496 (5)
H3A 1.034622 0.927984 −0.191693 0.060*
N1 0.7988 (3) 0.0345 (3) 0.3073 (2) 0.0526 (7)
N2 1.0974 (3) 0.8114 (2) 0.05292 (18) 0.0403 (6)
N3 0.7718 (3) 0.9643 (2) 0.07626 (18) 0.0395 (6)
C1 0.6915 (4) 0.0194 (3) 0.3744 (2) 0.0396 (7)
C2 0.1395 (5) 0.3211 (4) 0.4011 (3) 0.0717 (11)
H2A 0.106502 0.364655 0.463879 0.107*
H2B 0.041451 0.315586 0.374913 0.107*
H2C 0.212470 0.374938 0.353007 0.107*
C3 0.2307 (4) 0.1769 (3) 0.4191 (2) 0.0468 (8)
C4 0.1682 (4) 0.0623 (4) 0.4001 (3) 0.0534 (8)
H4 0.061827 0.077862 0.384396 0.064*
C5 0.2481 (4) −0.0742 (4) 0.4020 (2) 0.0478 (8)
C6 0.1710 (4) −0.1848 (4) 0.3673 (3) 0.0671 (10)
H6A 0.188646 −0.176503 0.294579 0.101*
H6B 0.052684 −0.173945 0.395340 0.101*
H6C 0.222611 −0.274736 0.389801 0.101*
C7 1.2647 (4) 0.7534 (3) 0.0327 (2) 0.0473 (8)
C8 1.2837 (4) 0.6213 (4) 0.0873 (3) 0.0606 (10)
H8 1.384128 0.561661 0.086540 0.073*
C9 1.1330 (4) 0.5972 (3) 0.1397 (3) 0.0567 (9)
H9 1.109622 0.518317 0.182067 0.068*
C10 1.0136 (4) 0.7155 (3) 0.1187 (2) 0.0449 (7)
C11 0.8420 (4) 0.7309 (3) 0.1580 (2) 0.0447 (7)
C12 0.7729 (4) 0.6159 (3) 0.2289 (3) 0.0503 (8)
C13 0.7444 (5) 0.6233 (4) 0.3313 (3) 0.0665 (10)
H13 0.768268 0.700147 0.357301 0.080*
C14 0.6801 (5) 0.5173 (4) 0.3969 (3) 0.0771 (12)
H14 0.663413 0.522557 0.466617 0.092*
C15 0.6414 (5) 0.4055 (4) 0.3602 (4) 0.0782 (13)
H15 0.599705 0.333974 0.404477 0.094*
C16 0.6639 (6) 0.3990 (4) 0.2581 (4) 0.0835 (14)
H16 0.634508 0.323894 0.232786 0.100*
C17 0.7303 (5) 0.5035 (4) 0.1916 (3) 0.0723 (11)
H17 0.746238 0.497968 0.121935 0.087*
C18 0.7317 (4) 0.8471 (3) 0.1380 (2) 0.0420 (7)
C19 0.5562 (4) 0.8669 (4) 0.1796 (3) 0.0524 (8)
H19 0.497065 0.803208 0.222913 0.063*
C20 0.4916 (4) 0.9926 (4) 0.1456 (3) 0.0579 (9)
H20 0.379469 1.032271 0.161069 0.069*
C21 0.6245 (4) 1.0550 (3) 0.0816 (2) 0.0458 (7)
C22 0.6097 (4) 1.1845 (3) 0.0309 (3) 0.0534 (8)
H22 0.502752 1.235741 0.040563 0.064*
C23 0.9244 (5) 0.7774 (4) −0.1392 (3) 0.0659 (10)
H23A 1.023025 0.711308 −0.134879 0.099*
H23B 0.888050 0.768926 −0.200714 0.099*
H23C 0.836637 0.759644 −0.082035 0.099*

Source of materials

The manganese precursor [Mn(DPP)(H2O)2]ClO4 (H2DPP = 5,15-diphenylporphyrin) was prepared by refluxing the mixture of H2DPP and [Mn(ClO4)2]⋅6H2O with molar ratio of 1:1 in DMF for 6–7 h under air atmosphere. A methanol/water (5:1, v:v) (10 mL) solution of [Ph4P][Ru(acac)2(CN)2].H2O (acac = acetylacetonato) (0.10 mmol, 71.0 mg) was carefully added into another solution formed by [Mn(DPP)(H2O)2]ClO4 (0.10 mmol, 65.1 mg) dissolved in methanol (10 mL). The resulting mixture was filtered after several minutes stirring and the filtrate was put in the dark with no disturbation for about one week at room temperature. The title dark-red block crystals were obtained by filtration with the yield of 51.3 mg (55.1%).

Experimental details

The coordinates of hydrogen atoms were added using riding models; the corresponding U iso  values were set to 1.2U eq or 1.5U eq of the parent atoms.

Comment

Porphyrin derivatives, which have attracted continuous and extensive interest over a long time in a wide range of fields including life science, chemistry, physics, and material sciences because of their excellent chemical and physical properties [4], [5], [6], [7]. These ligands can coordinate with many magnetic metal centers to assemble molecular magnetic systems. Among which, due to the large spin state (S = 2) and the usually negative magnetic anisotropy, the Mn(III) ion plays an important role in magnetism. Therefore the manganese(III) porphyrin derivatives are worth to be investigated systematically towards preparing molecular magnetic materials [8], [9], [10], [11], [12].

As shown in the Figure, the title salt is comprised by one [Mn(DPP)(CH3OH)2]+ cation and one [Ru(acac)2(CN)2] anion. The Ru ion in the cyano precursor is coordinated by four O atoms of two acetylacetonato ions and two C atoms of cyano groups in trans position, forming a hexa-coordinated octahedron. The Ru–O bond lengths are 2.009(2) and 2.003(2) Å, respectively, with the inconspicuous difference from the Ru–C 2.071(3) Å, demonstrating the only slightly distorted octahedral geometry around the Ru(III) ion. The coordination sphere for the Mn(III) ion (located on an inversion center) in the title complex is also described as a distorted octahedral, in which four positions are occupied by four pyrrole N atoms [13] located in a perfect equatorial plane and the other two come from two O atoms of the two coordinated methanol molecules. Different from the bond parameters around the Ru(III) ion, the axial Mn–O methanol bond length 2.246(2) Å is obviously longer than the equatorial Mn–N bond lengths (2.005(2) and 2.009(2) Å), providing clear information about the axial markedly elongated octahedral around the Mn(III) ion, typically resulted from the proverbial Jahn–Teller effect. Dependent on the strong intermolecular O-H⃛N interactions with the D⃛A = 2.735(6) Å and <DHA = 177.6(9)° between the N atom of the cyanide group and the O atom of the methanol molecule, the cations and anions in the ion-pair complex can be further linked into a chain structure.


Corresponding author: Jianguo Wei, School of Computer Engineering, Weifang University, Weifang, Shandong 261061, P. R. China, E-mail:

Funding source: Shandong Provincial Natural Science Foundation

Award Identifier / Grant number: ZR2019BEM017 and ZR2019QB011

Funding source: Weifang University Doctoral Research Funding

Award Identifier / Grant number: 2019BS007

  1. Author contributions: All the authors have accepted responsibility for the entire content of this submitted manuscript and approved submission.

  2. Research funding: This work was supported by the Shandong Provincial Natural Science Foundation (ZR2019BEM017 and ZR2019QB011) and Weifang University Doctoral Research Funding (2019BS007).

  3. Conflict of interest statement: The authors declare no conflicts of interest regarding this article.

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Received: 2022-09-02
Accepted: 2022-10-10
Published Online: 2022-10-20
Published in Print: 2022-12-16

© 2022 the author(s), published by De Gruyter, Berlin/Boston

This work is licensed under the Creative Commons Attribution 4.0 International License.

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  62. The crystal structure of trans-dichlorido-(ethylenediamine-κ 2 N,N′)-bis(triphenylphosphine-κ 1 P)ruthenium(II), C38H38Cl2N2P2Ru
  63. The double polymeric chain of catena-poly[(μ2-6-bromopyridine-3-carboxylato-κ2 O,O′) (6-bromopyridine-3-carboxylato-κ2 O,O′) (μ2-1,2-bis(4-pyridyl)ethylene-κ2 N:N′)cobalt(II)], C24H16CoBr2N4O4
  64. The crystal structure of tert-butyl 2-(4-(12-bromo [2.2]paracyclophanyl)carbamoyl)pyrrolidine-1-carboxylate, C26H31BrN2O3
  65. The crystal structure of (Z)-2-(2,3-dimethoxybenzylidene)naphtho[1,2-b]furan-3(2H)-one, C21H16O4
  66. Crystal structure of 2-hydroxy-1-tosylindolin-3-yl- 2-naphthoate, C26H21N1S1O5
  67. The crystal structure of 1-methyl-N-(1-methyl-1H-imidazole-2-carbonyl)-1H-imidazole-2-carboxamide, C10H11N5O2
  68. The crystal structure of (E)-2-((5-bromo-2-hydroxybenzylidene)amino)-3′,6′-bis(ethylamino)-2′, 7′-dimethylspiro[isoindoline-1,9′-xanthen]-3-one, C33H31BrN4O3
  69. The crystal structure of dimethanol-5,15-diphenylporphyrin-21,23-diido-κ4 N,Nʹ,Nʺ,Nʹʺ-manganese(III) trans-dicyanido-bis(acetylacetonato-κ2O,Oʹ)ruthenium(III), C46H42N6O6RuMn
  70. Crystal structure of 1,4,8,11-tetraazacyclotetradecane-1,8-diium bis(3,5-dicarboxybenzoate), C28H36N4O12
  71. Bifurcated halogen bonds in the crystal structure of 2,2′-bi(1,8-naphthyridine)—1,4-diiodotetrafluorobenzene (1/1), C22H10F4I2N4
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