Home Physical Sciences Crystal structure of photochromic 3-(5-(2,5-dimethylthiophen-3-yl)-2,2,3,3,4,4-hexafluorocyclopentyl)-2-methylbenzo[b]-thiophene, C20H14F6S2
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Crystal structure of photochromic 3-(5-(2,5-dimethylthiophen-3-yl)-2,2,3,3,4,4-hexafluorocyclopentyl)-2-methylbenzo[b]-thiophene, C20H14F6S2

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Published/Copyright: February 14, 2023

Abstract

C20H14F6S2, triclinic, P 1 (no. 2), a = 8.6105(19) Å, b = 11.027(3) Å, c = 11.485(3) Å, α = 87.191(3)°, β = 69.130(2)°, γ = 69.679(2)°, V = 952.1(4) Å3, Z = 2, R gt (F) = 0.0344, wR ref (F2) = 0.0967, T = 296(2) K.

CCDC no.: 2238116

The molecular structure is shown in the figure. (Ellipsoids are drawn at the 30% probability level.) Table 1 contains crystallographic data and Table 2 contains the list of the atoms including atomic coordinates and displacement parameters.

Table 1:

Data collection and handling.

Crystal: Colourless block
Size: 0.17 × 0.10 × 0.10 mm
Wavelength: Mo Kα radiation (0.71073 Å)
μ: 6.0 mm−1
Diffractometer, scan mode: Bruker APEXII, φ and ω
θmax, completeness: 56.6°, >99%
N(hkl)measured, N(hkl)unique, Rint: 13,239, 9148, 0.025
Criterion for Iobs, N(hkl)gt: Iobs > 2σ(Iobs), 7183
N(param)refined: 686
Programs: SHELX [1, 2], Bruker [3]
Table 2:

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2).

Atom x y z Uiso*/Ueq
C1 0.4796 (4) 0.8850 (3) −0.1232 (2) 0.0833 (8)
H1 0.5293 0.9255 −0.1920 0.100*
C2 0.2985 (4) 0.9374 (3) −0.0550 (2) 0.0720 (7)
H2 0.2294 1.0135 −0.0774 0.086*
C3 0.2201 (3) 0.8779 (2) 0.04547 (19) 0.0549 (5)
H3 0.0986 0.9130 0.0904 0.066*
C4 0.3249 (2) 0.76428 (18) 0.07932 (15) 0.0418 (4)
C5 0.5084 (3) 0.7151 (2) 0.01182 (17) 0.0513 (5)
C6 0.5864 (3) 0.7754 (3) −0.0914 (2) 0.0730 (7)
H6 0.7079 0.7416 −0.1370 0.088*
C7 0.2760 (2) 0.68799 (17) 0.18331 (15) 0.0371 (4)
C8 0.4174 (2) 0.58908 (18) 0.19297 (17) 0.0443 (4)
C9 0.4199 (3) 0.4917 (2) 0.2875 (2) 0.0618 (6)
H9A 0.4748 0.4058 0.2458 0.093*
H9B 0.3003 0.5041 0.3421 0.093*
H9C 0.4861 0.5023 0.3357 0.093*
C10 0.0922 (2) 0.70896 (16) 0.26755 (15) 0.0355 (4)
C11 −0.0309 (3) 0.67752 (19) 0.21851 (16) 0.0457 (4)
C12 −0.2116 (3) 0.7267 (2) 0.32398 (18) 0.0491 (5)
C13 −0.1643 (2) 0.72670 (18) 0.43986 (16) 0.0425 (4)
C14 0.0174 (2) 0.73723 (16) 0.39250 (15) 0.0340 (4)
C15 0.0867 (2) 0.76743 (16) 0.48271 (15) 0.0350 (4)
C16 0.1873 (2) 0.84451 (17) 0.46381 (16) 0.0391 (4)
C17 0.2505 (3) 0.91637 (19) 0.35445 (18) 0.0491 (5)
H17A 0.2659 0.9907 0.3822 0.074*
H17B 0.1646 0.9443 0.3146 0.074*
H17C 0.3619 0.8604 0.2960 0.074*
C18 0.0473 (2) 0.72183 (18) 0.60505 (16) 0.0418 (4)
H18 −0.0198 0.6686 0.6323 0.050*
C19 0.1161 (3) 0.76290 (19) 0.67724 (17) 0.0468 (4)
C20 0.0973 (3) 0.7379 (2) 0.81060 (19) 0.0646 (6)
H20A 0.2001 0.7397 0.8244 0.097*
H20B 0.0866 0.6544 0.8268 0.097*
H20C −0.0070 0.8038 0.8658 0.097*
F1 0.02068 (18) 0.54662 (12) 0.19522 (12) 0.0680 (4)
F2 −0.03710 (18) 0.72800 (15) 0.11043 (11) 0.0720 (4)
F3 −0.31394 (18) 0.65724 (16) 0.33175 (12) 0.0794 (4)
F4 −0.30135 (18) 0.85003 (15) 0.30754 (14) 0.0796 (4)
F5 −0.16098 (18) 0.61352 (13) 0.49247 (11) 0.0670 (4)
F6 −0.28826 (15) 0.82142 (14) 0.52739 (12) 0.0709 (4)
S1 0.61502 (7) 0.58088 (6) 0.07483 (5) 0.05886 (18)
S2 0.23189 (7) 0.85949 (5) 0.59620 (5) 0.05188 (16)

Source of material

The title compound was prepared according to the literature method [4] in 40.26% yield. The title compound crystallized from hexane at room temperature and produced colorless crystals.

Experimental details

The hydrogen atoms were located by geometrical calculations, and their positions and thermal parameters were fixed during the structure refinement. All H atoms attached to C were fixed geometrically and treated as riding with C–CH = 0.96 Å (methyl) or 0.93 Å (phenyl and thienyl) with Uiso(H) = 1.2Ueq (phenyl and thienyl) or Uiso(H) = 1.5Ueq (methyl).

Comment

Organic photochromic compounds have attracted remarkable research interests due to their wide applications in photo-optical switching devices [5]. In recent years, various diarylethene compounds have been reported to functionalize their characteristics, which have been used in several fields [6], [7], [8].

To date, novel diarylethene derivatives with a benzo[b]-thiophene and thiophene moiety have been reported and attracted much attention because their photochromic reactivity could be effectively modulated by light [4, 9, 10].

The title molecule adopts an antiparallel conformation (see the figure), and the distance between the photoactive carbon atoms (C8⋯C16) was 3.757 Å. Based on the empirical rule, the crystal displayed a notable color change upon irradiation of UV light. The colorless crystal turned blue upon irradiation with 313 nm light, and the colored crystals reverted to a colorless state upon irradiation with visible light. The molecule includes three kinds of planar rings. The dihedral angles between the perfluorocyclopentene ring and the adjacent benzo[b]thiophene, and thiophene rings were 62.9° for S1/C4, C5, C7, C8 and 138.0° for S2/C15, C16, C18, C19, repectively.


Corresponding author: Xianzhi Duan, Nanchang Vocational University, Nanchang 330007, People’s Republic of China, E-mail:

Funding source: Nanchang Vocational University

Acknowledgements

This work was supported by Nanchang Vocational University.

  1. Author contributions: All the authors have accepted responsibility for the entire content of this submitted manuscript and approved submission.

  2. Research funding: Nanchang Vocational University.

  3. Conflict of interest statement: The authors declare no conflicts of interest regarding this article.

References

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Received: 2022-12-26
Accepted: 2023-01-26
Published Online: 2023-02-14
Published in Print: 2023-04-25

© 2023 the author(s), published by De Gruyter, Berlin/Boston

This work is licensed under the Creative Commons Attribution 4.0 International License.

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