Bayesian optimization design for finding a maximum tolerated dose combination in phase I clinical trials
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Ami Takahashi
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Taiji Suzuki
Abstract
The development of combination therapies has become commonplace because potential synergistic benefits are expected for resistant patients of single-agent treatment. In phase I clinical trials, the underlying premise is toxicity increases monotonically with increasing dose levels. This assumption cannot be applied in drug combination trials, however, as there are complex drug–drug interactions. Although many parametric model-based designs have been developed, strong assumptions may be inappropriate owing to little information available about dose–toxicity relationships. No standard solution for finding a maximum tolerated dose combination has been established. With these considerations, we propose a Bayesian optimization design for identifying a single maximum tolerated dose combination. Our proposed design utilizing Bayesian optimization guides the next dose by a balance of information between exploration and exploitation on the nonparametrically estimated dose–toxicity function, thereby allowing us to reach a global optimum with fewer evaluations. We evaluate the proposed design by comparing it with a Bayesian optimal interval design and with the partial-ordering continual reassessment method. The simulation results suggest that the proposed design works well in terms of correct selection probabilities and dose allocations. The proposed design has high potential as a powerful tool for use in finding a maximum tolerated dose combination.
Acknowledgement
TS was partially supported by JSPS Kakenhi (18K19793, 18H03201, and 20H00576), Japan Digital Design, and JST-CREST.
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Author contribution: All the authors have accepted responsibility for the entire content of this submitted manuscript and approved submission.
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Research funding: None declared.
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Conflict of interest statement: The authors declare no conflicts of interest regarding this article.
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Supplementary Material
The online version of this article offers supplementary material (https://doi.org/10.1515/ijb-2020-0147).
© 2021 Walter de Gruyter GmbH, Berlin/Boston
Artikel in diesem Heft
- Frontmatter
- Research Articles
- Integrating additional knowledge into the estimation of graphical models
- Asymptotic properties of the two one-sided t-tests – new insights and the Schuirmann-constant
- Bayesian optimization design for finding a maximum tolerated dose combination in phase I clinical trials
- A Bayesian mixture model for changepoint estimation using ordinal predictors
- Power prior for borrowing the real-world data in bioequivalence test with a parallel design
- Bayesian approaches to variable selection: a comparative study from practical perspectives
- Bayesian adaptive design of early-phase clinical trials for precision medicine based on cancer biomarkers
- More than one way: exploring the capabilities of different estimation approaches to joint models for longitudinal and time-to-event outcomes
- Designing efficient randomized trials: power and sample size calculation when using semiparametric efficient estimators
- Power formulas for mixed effects models with random slope and intercept comparing rate of change across groups
- The effect of data aggregation on dispersion estimates in count data models
- A zero-inflated non-negative matrix factorization for the deconvolution of mixed signals of biological data
- Multiple scaled symmetric distributions in allometric studies
- Estimation of semi-Markov multi-state models: a comparison of the sojourn times and transition intensities approaches
- Regularized bidimensional estimation of the hazard rate
- The effect of random-effects misspecification on classification accuracy
- The area under the generalized receiver-operating characteristic curve
Artikel in diesem Heft
- Frontmatter
- Research Articles
- Integrating additional knowledge into the estimation of graphical models
- Asymptotic properties of the two one-sided t-tests – new insights and the Schuirmann-constant
- Bayesian optimization design for finding a maximum tolerated dose combination in phase I clinical trials
- A Bayesian mixture model for changepoint estimation using ordinal predictors
- Power prior for borrowing the real-world data in bioequivalence test with a parallel design
- Bayesian approaches to variable selection: a comparative study from practical perspectives
- Bayesian adaptive design of early-phase clinical trials for precision medicine based on cancer biomarkers
- More than one way: exploring the capabilities of different estimation approaches to joint models for longitudinal and time-to-event outcomes
- Designing efficient randomized trials: power and sample size calculation when using semiparametric efficient estimators
- Power formulas for mixed effects models with random slope and intercept comparing rate of change across groups
- The effect of data aggregation on dispersion estimates in count data models
- A zero-inflated non-negative matrix factorization for the deconvolution of mixed signals of biological data
- Multiple scaled symmetric distributions in allometric studies
- Estimation of semi-Markov multi-state models: a comparison of the sojourn times and transition intensities approaches
- Regularized bidimensional estimation of the hazard rate
- The effect of random-effects misspecification on classification accuracy
- The area under the generalized receiver-operating characteristic curve
