Home Physical Sciences Crystal Structure of ethyl (E)-2,4-dimethyl-5-((2-tosylhydrazono)methyl)-1H-pyrrole-3-carboxylate monohydrate, C17H23N3O5
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Crystal Structure of ethyl (E)-2,4-dimethyl-5-((2-tosylhydrazono)methyl)-1H-pyrrole-3-carboxylate monohydrate, C17H23N3O5

  • Zhongliang Lu EMAIL logo , Jingzhang Ren and Wei-Na Wu
Published/Copyright: February 1, 2018

Abstract

C17H23N3O5, monoclinic, P21/n (No. 14), a = 12.8132(12) Å, b = 21.4531(19) Å, c = 15.3438(14) Å, β = 114.308(2)°, V = 3843.8(6) Å3, Z = 8, Rgt(F) = 0.0652, wRref(F2) = 0.2297, T = 296(2) K.

CCDC no.:: 1817719

One of the two crystallographically independent molecules and one of the two water molecules of the title crystal structure are shown in the figure. Tables 1 and 2 contain details on crystal structure and measurement conditions and a list of the atoms including atomic coordinates and displacement parameters.

Table 1:

Data collection and handling.

Crystal:Yellow block
Size:0.15 × 0.12 × 0.12 mm
Wavelength:Mo Kα radiation (0.71073 Å)
μ:0.2 mm−1
Diffractometer, scan mode:Bruker SMART, φ and ω-scans
θmax, completeness:50°, >99%
N(hkl)measured, N(hkl)unique, Rint:21846, 7566, 0.049
Criterion for Iobs, N(hkl)gt:Iobs > 2 σ(Iobs), 3901
N(param)refined:486
Programs:Bruker programs [1], SHELX [2]
Table 2:

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2).

AtomxyzUiso*/Ueq
S10.30392(8)0.14143(5)0.16004(7)0.0545(3)
S21.23520(8)0.37405(5)−0.03388(7)0.0530(3)
N10.4388(3)0.15944(16)0.1995(2)0.0573(8)
N20.4641(3)0.21033(13)0.1534(2)0.0534(8)
N30.5415(3)0.30424(15)0.0646(3)0.0637(9)
H30.46800.30130.03850.076*
N41.0995(3)0.35770(15)−0.0740(2)0.0566(8)
N51.0730(3)0.30573(13)−0.0305(2)0.0527(8)
N60.9934(3)0.21210(14)0.0566(2)0.0565(8)
H6A1.06680.21500.08290.068*
O10.3017(2)0.08932(13)0.2165(2)0.0723(8)
O20.2449(2)0.19717(12)0.16361(19)0.0628(7)
O30.8007(3)0.39974(17)0.0167(3)0.1023(12)
O40.9133(4)0.3595(2)0.1616(3)0.1338(17)
O51.2393(2)0.42835(13)−0.08596(19)0.0674(8)
O61.2908(2)0.31855(12)−0.0433(2)0.0666(7)
O70.7350(2)0.11725(13)0.1053(2)0.0717(8)
O80.6213(3)0.16203(15)−0.0328(2)0.0850(9)
O90.9385(4)0.4471(2)−0.0726(4)0.1462(19)
H9A0.88620.4309−0.05940.219*
H9B0.90490.4572−0.13120.219*
O100.6083(3)0.06713(16)0.2107(2)0.0791(9)
H10A0.65840.08000.19190.119*
H10B0.64360.06500.27120.119*
C10.1362(5)0.0583(2)−0.2506(4)0.0940(16)
H1A0.11260.0941−0.29170.141*
H1B0.07260.0303−0.26610.141*
H1C0.19740.0375−0.25950.141*
C20.1768(3)0.0787(2)−0.1481(3)0.0631(11)
C30.2154(4)0.03654(19)−0.0741(4)0.0704(12)
H3A0.2143−0.0057−0.08800.084*
C40.2555(3)0.05517(18)0.0197(3)0.0622(11)
H40.28340.02590.06860.075*
C50.2542(3)0.11772(16)0.0408(3)0.0489(9)
C60.2144(3)0.16108(18)−0.0322(3)0.0585(10)
H60.21320.2032−0.01860.070*
C70.1773(4)0.14133(19)−0.1240(3)0.0653(11)
H70.15110.1708−0.17280.078*
C80.5710(3)0.22161(17)0.1842(3)0.0562(10)
H80.62230.19860.23530.067*
C90.6136(3)0.26896(17)0.1416(3)0.0566(10)
C100.7249(4)0.28787(18)0.1638(3)0.0627(11)
C110.7171(4)0.3344(2)0.0957(4)0.0695(12)
C120.6036(4)0.34387(19)0.0365(4)0.0695(12)
C130.8280(4)0.2604(2)0.2419(3)0.0818(14)
H13A0.85500.28810.29580.123*
H13B0.88710.25440.21950.123*
H13C0.80820.22100.26060.123*
C140.8110(5)0.3686(3)0.0856(5)0.0862(16)
C151.0174(6)0.3861(4)0.1605(6)0.147(3)
H15A1.08140.35790.19130.177*
H15B1.00800.39290.09520.177*
C161.0377(9)0.4429(5)0.2102(7)0.228(4)
H16A0.99470.47540.16740.342*
H16B1.11780.45260.23510.342*
H16C1.01440.43960.26200.342*
C170.5455(5)0.3879(2)−0.0443(4)0.1009(17)
H17A0.60200.4124−0.05480.151*
H17B0.49570.4149−0.02900.151*
H17C0.50140.3647−0.10120.151*
C181.4084(4)0.4382(2)0.3849(3)0.0904(15)
H18A1.42680.40020.42110.136*
H18B1.34960.46000.39610.136*
H18C1.47550.46390.40430.136*
C191.3663(3)0.4232(2)0.2794(3)0.0626(10)
C201.3337(4)0.46920(19)0.2103(3)0.0693(12)
H201.33880.51080.22880.083*
C211.2940(3)0.45497(17)0.1148(3)0.0603(10)
H211.27170.48640.06900.072*
C221.2876(3)0.39290(16)0.0875(3)0.0482(9)
C231.3204(3)0.34633(17)0.1557(3)0.0546(10)
H231.31620.30480.13720.065*
C241.3589(4)0.36142(19)0.2501(3)0.0615(10)
H241.38050.32990.29570.074*
C250.9655(3)0.29535(18)−0.0605(3)0.0565(10)
H250.91430.3199−0.10940.068*
C260.9224(3)0.24703(17)−0.0206(3)0.0531(9)
C270.8115(3)0.22933(17)−0.0416(3)0.0539(9)
C280.8172(3)0.18241(17)0.0259(3)0.0531(9)
C290.9312(3)0.17290(17)0.0850(3)0.0559(10)
C300.7075(4)0.2563(2)−0.1214(3)0.0703(12)
H30A0.63980.2367−0.12210.105*
H30B0.71240.2492−0.18140.105*
H30C0.70410.3004−0.11160.105*
C310.7238(4)0.15017(18)0.0379(3)0.0589(10)
C320.5208(4)0.1346(2)−0.0277(4)0.0874(15)
H32A0.45580.1621−0.05810.105*
H32B0.53350.12960.03870.105*
C330.4960(6)0.0743(3)−0.0749(6)0.159(3)
H33A0.55820.0621−0.09060.238*
H33B0.42690.0771−0.13230.238*
H33C0.48640.0439−0.03290.238*
C340.9889(4)0.1292(2)0.1656(3)0.0762(13)
H34A0.93230.10480.17610.114*
H34B1.03300.15240.22240.114*
H34C1.03870.10200.15040.114*
H10.483(3)0.1280(12)0.207(3)0.077(15)*
H4A1.057(3)0.3896(10)−0.079(3)0.057(12)*

Source of material

Ethyl 5-formyl-2,4-dimethylpyrrole-3-carboxylate (0.195 g, 1 mmol) and 1-tosylhydrazine (0.186 g, 1 mmol) was dissolved in an ethanol solution (10 mL). The mixture was stirred for 4 h under refluxing, and then cooled to room temperature. The resulting solution was left in air for a few days, yielding yellow block-shaped crystals.

Experimental details

The N—H and water H-atoms were refined with an N—H distance restraint of 0.86 Å and an O—H distance restraint of 0.85 Å. The other hydrogen atoms were placed at calculated positions and refined as riding atoms.

Discussion

Pyrrole and several pyrrole derivatives, especially the methyl homologs, are found in coal tar and bone oil. Up to now, its derivatives have been applied in different fields [3]. Our previous work shows that acylhydrazones bearing pyrrole units exhibit considerable biological activities [4], [5], [6]. However, the sulfonyl hydrazones with pyrrole ring are rarely reported.

In the title crystal structure, there are two independent sulfonyl hydrazones and two water molecules in the asymmetric unit. The dihedral angles between pyrrole ring (N3/C9—C12, r.m.s. deviation 0.006 Å; N6/C26—C29, r.m.s. deviation 0.002 Å) and tosyl moieties (C2—C7, r.m.s. deviation 0.005 Å; C19—C24, r.m.s. deviation 0.005 Å) are 105.1 and 105.8°, respectively. The torsion angles of S1–N1–N2–C8 and S2–N4–N5–C25 are −177.8(3) and 177.4(3)°, respectively. In the solid state, pairs of intermolecular N—H⋯O and O—H⋯O hydrogen bonds all moieties of the asymmetric unit into a centrosymmetrically dimer. A further two-dimensional supermolecular network is constructed via intermolecular N—H⋯O and O—H⋯O hydrogen bonds.

References

Bruker. SMART and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA (2007).Search in Google Scholar

Sheldrick, G. M.: A short history of SHELX. Acta Crystallogr. A64 (2008) 112–122.10.1107/S0108767307043930Search in Google Scholar PubMed

Baltazzi, E.; Krimen, L. I.: Recent advances in the chemistry of pyrrole. Chem. Rev. 63 (1963) 511–556.10.1021/cr60225a004Search in Google Scholar

Han, X.-F.; Cai, H.-X.; Jia, L.; Wu, W.-N.; Zhang, X.; Xu, J.; Zhang, Z.-P.; Wang, Y.: Syntheses, characterizations and antitumor activities of two copper(II) complexes with an acylhydrazone ligand bearing Pyrrole Unit. Chin. J. Inorg. Chem. 31 (2015) 1453–1459.Search in Google Scholar

Ye, X.-P.; Wang, G.-J.; Pan, P.; Zhang, Z.-P.; Wu, W.-N.; Wang, Y.: Syntheses, Crystal structures and biological activities of two Cu(II) complexes with an acylhydrazone ligand bearing pyrrole unit. Chin. J. Inorg. Chem. 30 (2014) 2789–2795.Search in Google Scholar

Ye, X.-P.; Zhu, T.-F.; Wu, W.-N.; Ma, T.-L.; Xu, J.; Zhang, Z.-P.; Wang, Y.; Jia, L.: Syntheses, characterizations and biological activities of two Cu(II) complexes with acylhydrazone ligand bearing pyrrole unit. Inorg. Chem. Commun. 47 (2014) 60–62.10.1016/j.inoche.2014.07.022Search in Google Scholar

Received: 2017-10-10
Accepted: 2018-1-17
Published Online: 2018-2-1
Published in Print: 2018-3-28

©2018 Zhongliang Lu et al., published by De Gruyter, Berlin/Boston

This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 License.

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