Startseite Medizin A novel synonymous homozygous variant [c.2538G>A (p.Thr846Thr)] in TRPM6 in a patient with hypomagnesemia with secondary hypocalcemia
Artikel
Lizenziert
Nicht lizenziert Erfordert eine Authentifizierung

A novel synonymous homozygous variant [c.2538G>A (p.Thr846Thr)] in TRPM6 in a patient with hypomagnesemia with secondary hypocalcemia

  • Sezer Acar EMAIL logo , Karl Peter Schlingmann , Özlem Nalbantoğlu , Özge Köprülü , Gülçin Arslan , Beyhan Özkaya und Behzat Özkan
Veröffentlicht/Copyright: 15. Juli 2021

Abstract

Objectives

Hypomagnesemia 1, intestinal (HOMG1) is characterized by neurological symptoms that occur due to hypocalcemia and hypomagnesemia and caused by mutations in the TRPM6. Most of the identified variants in TRPM6 lead to premature termination: nonsense, frameshift, deletion, and splice site mutations.

Case presentation

Herein, we report a 1.5 month-old case who presented with convulsion due to hypocalcemia and hypomagnesemia in the early infancy. Sequencing of TRPM6 revealed a novel homozygous synonymous variant [c.2538G > A (p.Thr846Thr)] in the last codon of exon 19, which is most likely to affect the splicing. We report a novel homozygous synonymous variant in the TRPM6 leading to HOMG1, expanding the mutational spectrum.

Conclusions

Synonymous mutations that were previously considered as harmless should be evaluated at the nucleotide level, keeping in mind that they may affect splicing and cause to the disease.


Corresponding author: Sezer Acar, MD, Division of Pediatric Endocrinology, Dr. Behçet Uz Children’s Education and Research Hospital, İsmet Kaptan Mh, Sezer Doğan Sokağı No:11, 35210, Konak, Izmir, Turkey, E-mail: , Phone: +90 0232 411 60 00 (extension number: 6318), Fax: +90 0232 489 23 15

Acknowledgments

We gratefully thank our patient and her family for their consent.

  1. Research funding: None declared.

  2. Author contributions: All authors have accepted responsibility for the entire content of this manuscript and approved its submission.

  3. Competing interests: Authors state no conflict of interest.

  4. Informed consent: Informed consent was obtained from all individuals included in this study.

  5. Ethical approval: The local Institutional Review Board deemed the study exempt from review.

References

1. Seo, JW, Park, TJ. Magnesium metabolism. Electrolyte Blood Press 2008;6:86–95. https://doi.org/10.5049/ebp.2008.6.2.86.Suche in Google Scholar PubMed PubMed Central

2. de Baaij, JH, Hoenderop, JG, Bindels, RJ. Magnesium in man: implications for health and disease. Physiol Rev 2015;95:1–46. https://doi.org/10.1152/physrev.00012.2014.Suche in Google Scholar PubMed

3. Schlingmann, KP, Sassen, MC, Weber, S, Pechmann, U, Kusch, K, Pelken, L, et al.. Novel TRPM6 mutations in 21 families with primary hypomagnesemia and secondary hypocalcemia. J Am Soc Nephrol 2005;16:3061–9. https://doi.org/10.1681/asn.2004110989.Suche in Google Scholar PubMed

4. Guran, T, Akcay, T, Bereket, A, Atay, Z, Turan, S, Haisch, L, et al.. Clinical and molecular characterization of Turkish patients with familial hypomagnesaemia: novel mutations in TRPM6 and CLDN16 genes. Nephrol Dial Transplant 2012;27:667–73. https://doi.org/10.1093/ndt/gfr300.Suche in Google Scholar PubMed

5. Chubanov, V, Waldegger, S, Mederos y Schnitzler, M, Vitzthum, H, Sassen, MC, Seyberth, HW, et al.. Disruption of TRPM6/TRPM7 complex formation by a mutation in the TRPM6 gene causes hypomagnesemia with secondary hypocalcemia. Proc Natl Acad Sci U S A 2004;101:2894–9. https://doi.org/10.1073/pnas.0305252101.Suche in Google Scholar PubMed PubMed Central

6. Apa, H, Kayserili, E, Agin, H, Hizarcioglu, M, Gulez, P, Berdeli, A. A case of hypomagnesemia with secondary hypocalcemia caused by Trpm6 gene mutation. Indian J Pediatr 2008;75:632–4. https://doi.org/10.1007/s12098-008-0121-7.Suche in Google Scholar PubMed

7. Altıncık, A, Schlingmann, KP, Tosun, MS. A novel homozygous mutation in the transient receptor potential melastatin 6 gene: a case report. J Clin Res Pediatr Endocrinol 2016;8:101–4. https://doi.org/10.4274/jcrpe.2254.Suche in Google Scholar PubMed PubMed Central

8. Rodriguez-Soriano, J, Vallo, A, Garcia-Fuentes, M. Hypomagnesaemia of hereditary renal origin. Pediatr Nephrol 1987;1:465–72. https://doi.org/10.1007/bf00849255.Suche in Google Scholar PubMed

9. Buske, OJ, Manickaraj, A, Mital, S, Ray, PN, Brudno, M. Identification of deleterious synonymous variants in human genomes. Bioinformatics 2013 Jun 4;29:1843–50. [Epub ahead of print] Erratum in: Bioinformatics 2015;31(5):799. https://doi.org/10.1093/bioinformatics/btt308.Suche in Google Scholar PubMed

10. Hunt, RC, Simhadri, VL, Iandoli, M, Sauna, ZE, Kimchi-Sarfaty, C. Exposing synonymous mutations. Trends Genet 2014;30:308–21. https://doi.org/10.1016/j.tig.2014.04.006.Suche in Google Scholar PubMed

11. Richards, S, Aziz, N, Bale, S, Bick, D, Das, S, Gastier-Foster, J, et al.. Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of medical genetics and genomics and the association for molecular pathology. Genet Med 2015;17:405–24. https://doi.org/10.1038/gim.2015.30.Suche in Google Scholar PubMed PubMed Central

12. Lek, M, Karczewski, KJ, Minikel, EV, Samocha, KE, Banks, E, Fennell, T, et al.. Analysis of protein-coding genetic variation in 60,706 humans. Nature 2016;536:285–91. https://doi.org/10.1038/nature19057.Suche in Google Scholar PubMed PubMed Central

13. Sutton, RA, Domrongkitchaiporn, S. Abnormal renal magnesium handling. Miner Electrolyte Metab 1993;19:232–40.Suche in Google Scholar

14. Lainez, S, Schlingmann, KP, van der Wijst, J, Dworniczak, B, van Zeeland, F, Konrad, M, et al.. New TRPM6 missense mutations linked to hypomagnesemia with secondary hypocalcemia. Eur J Hum Genet 2014;22:497–504. https://doi.org/10.1038/ejhg.2013.178.Suche in Google Scholar PubMed PubMed Central

15. Ryazanova, LV, Rondon, LJ, Zierler, S, Hu, Z, Galli, J, Yamaguchi, TP, et al.. TRPM7 is essential for Mg(2+) homeostasis in mammals. Nat Commun 2010;1:109. https://doi.org/10.1038/ncomms1108.Suche in Google Scholar PubMed PubMed Central

16. Luongo, F, Pietropaolo, G, Gautier, M, Dhennin-Duthille, I, Ouadid-Ahidouch, H, Wolf, FI, et al.. TRPM6 is essential for magnesium uptake and epithelial cell function in the colon. Nutrients 2018;10:784. https://doi.org/10.3390/nu10060784.Suche in Google Scholar PubMed PubMed Central

17. Özlü, SG, Kasapkara, CS, Ceylaner, S, Erat Nergız, M, Alan, B, Yılmaz, S, et al.. Mild hypotonia and recurrent seizures in an 8-month-old boy: Answers. Pediatr Nephrol 2019;34:1729–31. https://doi.org/10.1007/s00467-019-04236-4.Suche in Google Scholar PubMed

18. Bayramoğlu, E, Keskin, M, Aycan, Z, Savaş-Erdeve, Ş, Çetinkaya, S. Long-term clinical follow-up of patients with familial hypomagnesemia with secondary hypocalcemia. J Clin Res Pediatr Endocrinol 2021. https://doi.org/10.4274/jcrpe.galenos.2021.2020.0192 [Epub ahead of print].Suche in Google Scholar PubMed PubMed Central

19. Yücel, H, Genç Sel, Ç, Kasapkara, ÇS, Karacan Küçükali, G, Savas Erdeve, S, Öztoprak, Ü, et al.. Treatment difficulties in hypomagnesemia secondary to the transient receptor potential melastatin 6 gene: a case report with novel mutation. J Clin Res Pediatr Endocrinol 2021;13:114–8. https://doi.org/10.4274/jcrpe.galenos.2020.2020.0004.Suche in Google Scholar PubMed PubMed Central

20. Anna, A, Monika, G. Splicing mutations in human genetic disorders: examples, detection, and confirmation. J Appl Genet 2018;59:253–68. Erratum in: J Appl Genet 2019;60:231. https://doi.org/10.1007/s13353-018-0444-7.Suche in Google Scholar PubMed PubMed Central

Received: 2021-03-09
Accepted: 2021-06-20
Published Online: 2021-07-15
Published in Print: 2021-11-25

© 2021 Walter de Gruyter GmbH, Berlin/Boston

Artikel in diesem Heft

  1. Frontmatter
  2. Review Article
  3. An endocrine perspective on menstrual suppression for adolescents: achieving good suppression while optimizing bone health
  4. Original Articles
  5. Anthropometric, metabolic, and reproductive outcomes of patients with central precocious puberty treated with leuprorelin acetate 3-month depot (11.25 mg)
  6. Evaluation of the resilience of the girls with central precocious puberty treated with gonadotropin-releasing hormone analog
  7. The effect of GnRH stimulation on AMH regulation in central precocious puberty and isolated premature thelarche
  8. Association of the apoptotic marker APO1/Fas with children’s predisposing factors for metabolic syndrome and with mean platelet volume
  9. Serum adiponectin, body adiposity and metabolic parameters in obese Egyptian children with Down syndrome
  10. Urinary iodine and thyroglobulin are useful markers in infants suspected of congenital hypothyroidism based on newborn screening
  11. Comparison of plasmapheresis with medical apheresis in terms of efficacy and cost in the acute treatment of hypertriglyceridemia in children with lipoprotein lipase deficiency
  12. Clinical, biochemical and genotypical characteristics in biotinidase deficiency
  13. High uric acid levels in overweight and obese children and their relationship with cardiometabolic risk factors: what is missing in this puzzle?
  14. Optimizing pediatric histrelin implantation to improve success rates in clinic without sedation
  15. Determinants of ultra-processed food consumption in Brazilian children and adolescents with type 1 diabetes mellitus: a cross-sectional study
  16. The prevalence, immune profile, and clinical characteristics of children with celiac disease and type 1 diabetes mellitus in the state of Qatar
  17. Case Reports
  18. A rare and preventable aetiology of neurodevelopmental delay and epilepsy: familial glucocorticoid deficiency
  19. Giant plurihormonal pituitary adenoma in a child – case study
  20. The usefulness of copeptin for the diagnosis of nephrogenic diabetes insipidus in infancy: a case report
  21. A novel synonymous homozygous variant [c.2538G>A (p.Thr846Thr)] in TRPM6 in a patient with hypomagnesemia with secondary hypocalcemia
  22. Idiopathic juvenile osteoporosis in a child: a four-year follow-up with review of literature
Heruntergeladen am 19.12.2025 von https://www.degruyterbrill.com/document/doi/10.1515/jpem-2021-0165/pdf
Button zum nach oben scrollen