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Solution structure of Phl p 3, a major allergen from timothy grass pollen

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Published/Copyright: June 6, 2008
Biological Chemistry
From the journal Volume 389 Issue 7

Abstract

The major 97-aa timothy grass (Phleum pratense) allergen Phl p 3 was recently isolated from an extract of timothy grass pollen. Sequence comparison classifies this protein as a group 3 allergen. The solution structure of Phl p 3 as determined by nuclear magnetic resonance spectroscopy reveals that the protein consists of a core of hydrophobic amino-acid side chains from two β-sheets of five and four anti-parallel β-strands, respectively. This conformation is very similar to the crystal structure published for Phl p 2 and strongly resembles the known conformation of the carboxy-terminal domain of Phl p 1, the major difference being the loop orientations. Phl p 2 and Phl p 3 show virtually identical immunoreactivity, and comparison of the charged surface amino acids of the two proteins gives initial clues as to the IgE recognition epitopes of these proteins.


Corresponding author

Received: 2007-11-29
Accepted: 2008-2-27
Published Online: 2008-06-06
Published in Print: 2008-07-01

©2008 by Walter de Gruyter Berlin New York

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