Immunometabolism of T-cells in COVID-19
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Jian Li
Abstract
Facing post COVID-19 pandemic, it is important to more fully understand the role of T-cells during acute illness and convalescence. CD4+ and CD8+ T-cells were isolated from 184 COVID-19 patients with variant disease severity and 30 healthy individuals. T-cells were subjected to single-cell transcriptomic analysis and to metabolic flux analysis. Results from the two analyses were integrated into a new immunometabolomic scoring system, termed MAS, that was assessed using T-cells from other healthy organs. The MAS scoring system may provide an objective quantitative measure of metabolic activities of T-cells from various body fluids and tissues. In patients with a COVID- 19 infection, peripheral blood CD8+ T-cells from patients with both mild/moderate and severe/critical disease appeared to experience significant metabolic remodeling that favored the use of inositol phosphate, purine, ether lipid and fatty acid pathways. T-cells from patients with a severe/critical COVID-19 disease showed elevated fluxes in metabolic pathways including fatty acid, pentose-phosphate, lysine, cysteinemethionine. During convalescence, metabolism in CD8+ T-cells seemed to maintain a ‘‘pre-active” metabolic state that favored efficient utilization of the metabolic resources. In contrast, circulating CD4+ T-cells appeared to fail to mount a robust metabolic remodeling response during a severe/critical COVID-19 infection, suggesting a low functional reserve that may portend a poor outcome. T-cells from BAL fluid showed suppressed signalling via TCR-AMPK-WNT and lower metabolic utilization of amino-acids, fatty acids, retinol, which might lead to the dysfunction of infected T-cells within the lung. These findings illustrate the functional significance of metabolic remodeling in T-cells in response to a COVID-19 infection. Integration of single-cell transcriptomic data with metabolic flux analysis provides a robust immunological scoring system, which may facilitate future basic science and clinical research in immune response, cellular metabolism, and disease pathogenesis.
Abstract
Facing post COVID-19 pandemic, it is important to more fully understand the role of T-cells during acute illness and convalescence. CD4+ and CD8+ T-cells were isolated from 184 COVID-19 patients with variant disease severity and 30 healthy individuals. T-cells were subjected to single-cell transcriptomic analysis and to metabolic flux analysis. Results from the two analyses were integrated into a new immunometabolomic scoring system, termed MAS, that was assessed using T-cells from other healthy organs. The MAS scoring system may provide an objective quantitative measure of metabolic activities of T-cells from various body fluids and tissues. In patients with a COVID- 19 infection, peripheral blood CD8+ T-cells from patients with both mild/moderate and severe/critical disease appeared to experience significant metabolic remodeling that favored the use of inositol phosphate, purine, ether lipid and fatty acid pathways. T-cells from patients with a severe/critical COVID-19 disease showed elevated fluxes in metabolic pathways including fatty acid, pentose-phosphate, lysine, cysteinemethionine. During convalescence, metabolism in CD8+ T-cells seemed to maintain a ‘‘pre-active” metabolic state that favored efficient utilization of the metabolic resources. In contrast, circulating CD4+ T-cells appeared to fail to mount a robust metabolic remodeling response during a severe/critical COVID-19 infection, suggesting a low functional reserve that may portend a poor outcome. T-cells from BAL fluid showed suppressed signalling via TCR-AMPK-WNT and lower metabolic utilization of amino-acids, fatty acids, retinol, which might lead to the dysfunction of infected T-cells within the lung. These findings illustrate the functional significance of metabolic remodeling in T-cells in response to a COVID-19 infection. Integration of single-cell transcriptomic data with metabolic flux analysis provides a robust immunological scoring system, which may facilitate future basic science and clinical research in immune response, cellular metabolism, and disease pathogenesis.
Kapitel in diesem Buch
- Frontmatter I
- Prologue I VII
- Prologue II XI
- Prologue III XIII
- Preface XVII
- Overview XIX
- Contents XXXIII
-
Part I: Theories
-
Part I-A: Overarching theory
- Introduction 1
- Universal axioms in classical Chinese philosophy 5
- Category theory for structural characterization 15
- Axiomatic bipolar dynamics and their control 45
-
Part I-B: Systems theories
- Introduction 75
- Stochastic formalization of agent-oriented systems 79
- Simplification of high-dimensional multitempo dynamic models 109
- Ideas of symmetry as a biophysical basis of system biomedicine 123
- Disorder of multiscale control 149
-
Part II: Person’s life-sphere
-
Part II-A: Person’s biosphere
- Introduction 185
- Mutations as activators of biological evolutionary processes at population levels 189
- Immunometabolism of T-cells in COVID-19 209
-
Part II-A.2: Body’s vital functions
- Introduction 245
- Structural modeling of vascular networks 249
- Mathematical modeling of AI application for the diagnosis of blood flow disorders 283
- Modeling of glucose and insulin regulation within the framework of a self-consistent model of the cardiovascular system 303
- Hemodynamics in residual myocardial ischemia 319
- The quasi-one-dimensional model of the lymph flow in the human lymphatic system 335
- An integrate-and-fire mechanism for modeling rhythmicity in the neuroendocrine system 365
- Kinetic network modeling of the neuroendocrine hypothalamic-pituitary-adrenal axis dynamics with particular attention on the role of alcohol as a digestif 377
- Inflammation and immune response in atherosclerosis 393
-
Part II-A.3: Body’s motor functions
- Introduction 423
- A magnetic resonance spectroscopy approach to quantitatively measure GABA and phosphorus level changes in the primary motor cortex elicited by transcranial direct current stimulation 427
-
Part II-A.4: Body’s operational functions
- Introduction 441
- The fermionic mind hypothesis–a category-theoretic verification of consciousness 445
- Cross-task cognitive workload measurement based on the sample selection of the EEG data 459
-
Part II-B: Person’s eco-sphere exposures
- Introduction 475
- The spread of SARS-CoV-2 in Russia and the evolution of the properties of the pathogen 479
- Agent-based modeling of epidemic spread via kinetic Monte Carlo method 491
- Control of SARS-nCoV outbreaks in China 2020 513
-
Part II-B.2: Civilization
- Introduction 531
- Pesticide exposure: Toward holistic environmental modeling 535
-
Part II-C: Person’s sociosphere exposures
- Introduction 559
- Evolution of the health system in Shanghai, China, 2016–2020 563
-
Part III: Technologies
- Introduction 577
- Design-process automation using functional process blocks 581
- Slow/fast dynamic models with applications to engineering problems 601
-
Part III-B: Information sciences
- Introduction 613
- Numerical modeling of medical ultrasound using the grid-characteristic method 617
- The direct and the inverse magnetic encephalography problem 635
-
Part III-C: Data-analytic sciences
- Introduction 653
- Assessing the bioequivalence of two different drugs with the same active ingredient 655
- Estimation of adjusted relative risks in log-binomial regression using the Bekhit–Schöpe–Wagenpfeil algorithm 665
-
Part IV: Clinical medicine
- Introduction 679
- Finding optimal two-stage combined treatment protocols for a blood cancer model 681
- Unraveling the mysteries: Mathematical perspectives on traditional Chinese medicine meridians 697
- Epilogue 721
- Index 723
Kapitel in diesem Buch
- Frontmatter I
- Prologue I VII
- Prologue II XI
- Prologue III XIII
- Preface XVII
- Overview XIX
- Contents XXXIII
-
Part I: Theories
-
Part I-A: Overarching theory
- Introduction 1
- Universal axioms in classical Chinese philosophy 5
- Category theory for structural characterization 15
- Axiomatic bipolar dynamics and their control 45
-
Part I-B: Systems theories
- Introduction 75
- Stochastic formalization of agent-oriented systems 79
- Simplification of high-dimensional multitempo dynamic models 109
- Ideas of symmetry as a biophysical basis of system biomedicine 123
- Disorder of multiscale control 149
-
Part II: Person’s life-sphere
-
Part II-A: Person’s biosphere
- Introduction 185
- Mutations as activators of biological evolutionary processes at population levels 189
- Immunometabolism of T-cells in COVID-19 209
-
Part II-A.2: Body’s vital functions
- Introduction 245
- Structural modeling of vascular networks 249
- Mathematical modeling of AI application for the diagnosis of blood flow disorders 283
- Modeling of glucose and insulin regulation within the framework of a self-consistent model of the cardiovascular system 303
- Hemodynamics in residual myocardial ischemia 319
- The quasi-one-dimensional model of the lymph flow in the human lymphatic system 335
- An integrate-and-fire mechanism for modeling rhythmicity in the neuroendocrine system 365
- Kinetic network modeling of the neuroendocrine hypothalamic-pituitary-adrenal axis dynamics with particular attention on the role of alcohol as a digestif 377
- Inflammation and immune response in atherosclerosis 393
-
Part II-A.3: Body’s motor functions
- Introduction 423
- A magnetic resonance spectroscopy approach to quantitatively measure GABA and phosphorus level changes in the primary motor cortex elicited by transcranial direct current stimulation 427
-
Part II-A.4: Body’s operational functions
- Introduction 441
- The fermionic mind hypothesis–a category-theoretic verification of consciousness 445
- Cross-task cognitive workload measurement based on the sample selection of the EEG data 459
-
Part II-B: Person’s eco-sphere exposures
- Introduction 475
- The spread of SARS-CoV-2 in Russia and the evolution of the properties of the pathogen 479
- Agent-based modeling of epidemic spread via kinetic Monte Carlo method 491
- Control of SARS-nCoV outbreaks in China 2020 513
-
Part II-B.2: Civilization
- Introduction 531
- Pesticide exposure: Toward holistic environmental modeling 535
-
Part II-C: Person’s sociosphere exposures
- Introduction 559
- Evolution of the health system in Shanghai, China, 2016–2020 563
-
Part III: Technologies
- Introduction 577
- Design-process automation using functional process blocks 581
- Slow/fast dynamic models with applications to engineering problems 601
-
Part III-B: Information sciences
- Introduction 613
- Numerical modeling of medical ultrasound using the grid-characteristic method 617
- The direct and the inverse magnetic encephalography problem 635
-
Part III-C: Data-analytic sciences
- Introduction 653
- Assessing the bioequivalence of two different drugs with the same active ingredient 655
- Estimation of adjusted relative risks in log-binomial regression using the Bekhit–Schöpe–Wagenpfeil algorithm 665
-
Part IV: Clinical medicine
- Introduction 679
- Finding optimal two-stage combined treatment protocols for a blood cancer model 681
- Unraveling the mysteries: Mathematical perspectives on traditional Chinese medicine meridians 697
- Epilogue 721
- Index 723