The ability of MALDI TOF MS (matrix-assisted laser desorption ionisation time-of-flight mass spectrometry) to identify cultivable microflora from two waste disposal sites from non-ferrous metal industry was analysed. Despite the harsh conditions (extreme pH values and heavy metal content in red mud disposal site from aluminium production or high heavy metal content in nickel sludge), relatively high numbers of bacteria were recovered. In both environments, the bacterial community was dominated by Gram-positive bacteria, especially by actinobacteria. High-quality MALDI TOF mass spectra were obtained but most of the bacteria isolates could be not identified using MALDI Biotyper software. The overall identification rate was lower than 20 %; in two of the environments tested identification rates were lower than 10 %. As a dominant bacterial species, Microbacterium spp. in drainage water from an aluminium red mud disposal site near Žiar nad Hronom, Bacillus spp. in red mud samples from the same site, and Arthrobacter spp. from nickel smelter sludge near Sereï were identified by a combination of the Biolog system and 16S rRNA sequence analysis. As the primary focus of the MALDI TOF MS-based methodology is directed towards medically important bacteria, reference database spectra expansion and refinement are needed to improve the ability of MALDI TOF MS to identify environmental bacteria, especially those from extreme environments.
Inhalt
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Erfordert eine Authentifizierung Nicht lizenziertNeed for database extension for reliable identification of bacteria from extreme environments using MALDI TOF mass spectrometryLizenziert4. September 2014
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Erfordert eine Authentifizierung Nicht lizenziertPreparation of iron, aluminium, calcium, magnesium, and zinc humates for environmental applicationsLizenziert4. September 2014
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Erfordert eine Authentifizierung Nicht lizenziertRhizofiltration potential of Arundo donax for cadmium and zinc removal from contaminated wastewaterLizenziert4. September 2014
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Erfordert eine Authentifizierung Nicht lizenziertApplication of positron emission tomography and 2-[18F]fluoro-2-deoxy-d-glucose for visualization and quantification of solute transport in plant tissuesLizenziert4. September 2014
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Erfordert eine Authentifizierung Nicht lizenziertApplication of mixed solvents for elution of organophosphate pesticides extracted from raw propolis by matrix solid-phase dispersion and analysis by GC-MSLizenziert4. September 2014
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Erfordert eine Authentifizierung Nicht lizenziertDetection of peroxyacetyl nitrate in air using chemiluminescence aerosol detectorLizenziert4. September 2014
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Erfordert eine Authentifizierung Nicht lizenziertDetermination of direct violet 51 dye in water based on its decolorisation by electrochemical treatmentLizenziert4. September 2014
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Erfordert eine Authentifizierung Nicht lizenziertDetermination of α-chaconine and α-solanine in commercial potato crisps by QuEChERS extraction and UPLC-MS/MSLizenziert4. September 2014
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Erfordert eine Authentifizierung Nicht lizenziertPreparation and characterization of ultrasensitive and specific polyclonal antiserum against ciprofloxacin based on cationized bovine serum albuminLizenziert4. September 2014
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Erfordert eine Authentifizierung Nicht lizenziertDye decolorisation by laccase immobilised in lens-shaped poly(vinyl alcohol) hydrogel capsulesLizenziert4. September 2014
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Erfordert eine Authentifizierung Nicht lizenziertPurification of phloridzin from Lithocarpus polystachyus Rehd leaves using polymeric adsorbents functionalized with glucosamine and β-cyclodextrinLizenziert4. September 2014
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Erfordert eine Authentifizierung Nicht lizenziertNovel dendrimer-based nickel catalyst: synthesis, characterization and performance in ethylene oligomerizationLizenziert4. September 2014
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Erfordert eine Authentifizierung Nicht lizenziertEnantioseparation of mandelic acid and α-cyclohexylmandelic acid using an alcohol/salt-based aqueous two-phase systemLizenziert4. September 2014
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Erfordert eine Authentifizierung Nicht lizenziertChemical characterisation of biosludge from a wastewater treatment plant in a neutral sulphite semi-chemical pulp mill by single and sequential extraction of heavy metals and micro-/macronutrients — a case studyLizenziert4. September 2014
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Erfordert eine Authentifizierung Nicht lizenziertCu-based atom transfer radical polymerization of methyl methacrylate using a novel tridentate ligand with mixed donor atomsLizenziert4. September 2014
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Erfordert eine Authentifizierung Nicht lizenziertSynthesis by UV-curing and characterisation of polyurethane acrylate-lithium salts-based polymer electrolytes in lithium batteriesLizenziert4. September 2014
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Erfordert eine Authentifizierung Nicht lizenziertCobalt ion-doped polyaniline, poly(N-methylaniline), and poly(N-ethylaniline): electrosynthesis and characterisation using electrochemical methods in acidic solutionsLizenziert4. September 2014
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Erfordert eine Authentifizierung Nicht lizenziertGrowth and morphological studies of NiO/CuO/ZnO based nanostructured thin films for photovoltaic applicationsLizenziert4. September 2014
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Erfordert eine Authentifizierung Nicht lizenziertEfficient one-pot synthesis of 14-aryl-14H-dibenzo[a,j]xanthene derivatives promoted by niobium pentachlorideLizenziert4. September 2014
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Erfordert eine Authentifizierung Nicht lizenziertBinding of biguanides to β-lactoglobulin: molecular-docking and molecular dynamics simulation studiesLizenziert4. September 2014
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Erfordert eine Authentifizierung Nicht lizenziertAb initio- and density-functional studies of conformational behaviour of N-formylmethionine in gaseous phaseLizenziert4. September 2014
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Erfordert eine Authentifizierung Nicht lizenziertErratum to: “Martin Danko, Matej Mičušík, Mária Omastová, Juraj Bujdák, Dušan Chorvát, Jr.: Spectral characterisation of new organic fluorescent dyes with an alkoxysilane moiety and their utilisation for the labelling of layered silicates”Lizenziert4. September 2014