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Synthesis of pyrimidines by Fe3O4@SiO2-L-proline nanoparticles

  • Javad Safaei-Ghomi EMAIL logo and Zahra Samadi
Published/Copyright: July 29, 2020

Abstract

Fe3O4@SiO2-L-proline nanoparticles have been used as an effective catalyst for the preparation of pyrimidines by three-component reactions of 1,3-dimethylbarbituric acid, aromatic aldehydes and 4-methyl aniline or 4-methoxy aniline under reflux condition in ethanol. Fe3O4@SiO2-L-proline nanoparticles have been characterized by scanning electronic microscopy (SEM), powder X-ray diffraction (XRD), vibrating sample magnetometer (VSM), thermal gravimetric analysis (TGA), energy dispersive X-ray (EDS), dynamic light scattering (DLS) and FT-IR spectroscopy. This method provides several advantages including, the reusability of the catalyst, low catalyst loading, atom economy, short reaction times and high yields of products.

1 Introduction

Pyrimidines have many biological properties including anticancer (Singh et al., 2009), anti-diabetic (Barakat et al., 2015), antioxidan (Barakat et al., 2016), antibacterial, anti-fungal (Dhorajiya et al., 2014), and anticonvulsant (Andrews et al., 1979). The discovery impressive ways for the preparation of pyrimidines is a serious challenge (Maleki and Paydar, 2016; Shaabani et al., 2010; Maleki and Aghaei, 2017). The synthesis of pyrimidine derivatives have been developed by InCl3 (Sharma et al., 2015), H3PW12O40 (Panahi et al., 2013), K2CO3 (Azzam and Pasha, 2012), p-toluene sulfonic acid (Rahmati and Khalesi, 2012), [Bmim]PF6 (Shirvan et al., 2012). Each of these procedures may have its own advantages but also suffer from such apparent drawbacks as prolonged reaction times, complicated work-up, low yield, or hazardous reaction conditions. Despite the availability of these ways, there remains enough choice for a capable and reusable catalyst with high catalytic activity for the preparation of pyrimidines. Multicomponent reactions (MCRs) enhance the efficiency by combining several operational steps without isolation of intermediates or changing the reaction conditions (Maleki, 2013; Maleki et al., 2018a; Shaabani et al., 2007, 2009). Ideally, introducing neat processes and utilizing eco-friendly and green catalysts which can be simply recycled at the end of reactions has obtained great attention in recent years (Maleki, 2018). Magnetic nanoparticles (MNPs) have been utilized as a robust catalyst with a very significant feature of straightforward separation by external magnet bar (Chen et al., 2015; Elsayed et al., 2018; Fakheri-Vayeghan et al., 2018; Maleki et al., 2018b; Safaei-Ghomi et al., 2018). Magnetic materials have appeared as a useful group of heterogeneous catalysts owing to their various usages in synthesis and catalysis (Huang et al., 2016; Maleki, 2012, 2014; Shin et al., 2015; Tietze et al., 2015). The surface of magnetic nanoparticles can be functionalized by surface modifications to provide the attachment of a variety of eligible functionalities (Deatsch and Evans, 2014; Maleki and Firouzi-Haji, 2018; Zhang et al., 2012; Zheng et al., 2009). Herein, we report the use of nano-Fe3O4@SiO2-L-proline as an effective catalyst for the synthesis of pyrimidines by three-component reactions of 1,3-dimethylbarbituric acid, aromatic aldehydes and 4-methyl aniline or 4-methoxy aniline under reflux condition in ethanol (Scheme 1).

Scheme 1 Synthesis of pyrimidines using Fe3O4@SiO2-L-proline nanoparticles.
Scheme 1

Synthesis of pyrimidines using Fe3O4@SiO2-L-proline nanoparticles.

2 Results and discussion

The process of the preparation Fe3O4@SiO2-L-proline nanoparticles is shown in Scheme 2.

Scheme 2 Schematic illustration of the preparation Fe3O4@SiO2-L-proline nanoparticles.
Scheme 2

Schematic illustration of the preparation Fe3O4@SiO2-L-proline nanoparticles.

XRD pattern of Fe3O4 and Fe3O4@SiO2-L-proline nanoparticles is indicated in Figure 1. The pattern agrees with the reported pattern for Fe3O4 (JCPDS No. 75-1609). The crystallite size of Fe3O4@SiO2-L-proline was calculated by the Debye–Scherer equation is about 46-50 nm, in good agreement with the result gained by SEM.

Figure 1 The XRD pattern of (a) Fe3O4 and (b) Fe3O4@SiO2-L-proline nanoparticles.
Figure 1

The XRD pattern of (a) Fe3O4 and (b) Fe3O4@SiO2-L-proline nanoparticles.

The particle size and morphology of Fe3O4@SiO2-L-proline was indicated by SEM. The statistic of results from SEM images exhibit that the average size of Fe3O4@SiO2-L-proline is about 45-50 nm (Figure 2).

Figure 2 SEM image of Fe3O4@SiO2-L-proline nanoparticles.
Figure 2

SEM image of Fe3O4@SiO2-L-proline nanoparticles.

Figure 3 displays FT-IR spectra of Fe3O4, Fe3O4@SiO2 and Fe3O4@SiO2-L-proline nanoparticles. The FT-IR spectra of Fe3O4@SiO2 and Fe3O4@SiO2-L-proline nanoparticles show the vibrations of Fe-O at 570-588 cm−1. The band at about 1050 cm−1 belongs to Si–O stretching vibrations. The peaks that appear at 1042, 1131 and 3320 cm−1 are related to the stretching of C–O, C–N and N-H bonds. A peak appears at about 1720 cm−1 due to the stretching of the C=O group in L-proline.

Figure 3 FT-IR spectra of (a) Fe3O4 (b) Fe3O4@SiO2 and (c) Fe3O4@ SiO2-L-proline nanoparticles.
Figure 3

FT-IR spectra of (a) Fe3O4 (b) Fe3O4@SiO2 and (c) Fe3O4@ SiO2-L-proline nanoparticles.

The magnetic properties of Fe3O4, Fe3O4@SiO2 and Fe3O4 @SiO2-L-proline were determined using VSM (Figure 4). The amount of saturation magnetization for Fe3O4, Fe3O4@SiO2 and Fe3O4@SiO2-L-proline is 59.2, 41.3 and 14.5 emu/g. These results demonstrate that the magnetization property decreases by coating and functionalization.

Figure 4 The VSM curve of: (a) Fe3O4 (b) Fe3O4@SiO2 and (c) Fe3O4@ SiO2-L-proline nanoparticles.
Figure 4

The VSM curve of: (a) Fe3O4 (b) Fe3O4@SiO2 and (c) Fe3O4@ SiO2-L-proline nanoparticles.

TGA indicates the thermal stability of the Fe3O4@ SiO2-L-proline. These nanoparticles display appropriate thermal stability without a significant decrease in weight (Figure 5). The weight loss at temperatures below 200°C is owing to the removal of physically adsorbed solvent. The curve indicates a weight loss about 12.7% from 250°C to 600°C, resulting from the decomposition of the organic spacer grafting to the nanoparticles surface.

Figure 5 TGA curve of Fe3O4@SiO2-L-proline nanoparticles.
Figure 5

TGA curve of Fe3O4@SiO2-L-proline nanoparticles.

An EDS spectrum of Fe3O4@SiO2-L-proline (Figure 6) displays that the elemental compositions are carbon, silicon, oxygen, iron and nitrogen.

Figure 6 EDS spectrum of Fe3O4@SiO2-L-proline nanoparticles.
Figure 6

EDS spectrum of Fe3O4@SiO2-L-proline nanoparticles.

In order to investigate the size distribution of nanocatalysts, DLS (dynamic light scattering) measurements of the nanoparticles were showed in Fig ure 7. The size distribution is centered at a value of 49.2 nm. The dispersion for DLS analysis (1.25 g nanocatalyst at 25 mL ethanol) was prepared using an ultrasonic bath (50 W) for 20 min.

Figure 7 DLS of Fe3O4@SiO2-L-proline nanoparticles.
Figure 7

DLS of Fe3O4@SiO2-L-proline nanoparticles.

Initially, we had optimized different reaction parameters for the preparation of pyrimidines by three-component reactions of 1,3-dimethylbarbituric acid, 4-chlorobenzaldehyde and 4-methoxy aniline as a model reaction. The model reactions were performed using CAN, L-proline, Et3N, Fe3O4, Fe3O4@SiO2 and Fe3O4@SiO2-L-proline nanoparticles. Several reactions were investigated using diverse solvents such as ethanol, water, acetonitrile and dimethylformamide. The best results were achieved in EtOH and we found that the reaction gave satisfying results using Fe3O4@SiO2-L-proline which gave good yields of products (Table 1).

Table 1

Optimization of reaction conditions using different catalysts.[a]

EntrySolvent (reflux)CatalystTime (min)Yield (%)[b]
1EtOH-------500trace
2EtOHCAN (4 mol%)40022
3EtOHEt3N (10 mol%)30035
4EtOHL-proline (10 mol%)15055
5EtOHFe3O4 NP (50 mg)20025
6EtOHNano-Fe3O4@SiO2 (20 mol%)20033
7H2ONano-Fe3O4@SiO2-L-proline (8 mg)12062
8DMFNano-Fe3O4@SiO2-L-proline (8 mg)12070
9CH3CNNano-Fe3O4@SiO2-L-proline (8 mg)12085
10EtOHNano-Fe3O4@SiO2-L-proline (6 mg)12090
11EtOHNano-Fe3O4@SiO2-L-proline (8 mg)12092
12EtOHNano-Fe3O4@SiO2-L-proline (10 mg)12092

The above results indicate the present catalytic way is extendable to a wide diversity of substrates to create pyrimidines. Investigations of the reaction scope showed that diverse aromatic aldehydes can be utilized in this method (Table 2). Turnover frequency (TOF) for this catalytic system is listed in Table 2.

Table 2

Synthesis of pyrimidines by nano-Fe3O4@SiO2-L-proline (8 mg) under reflux condition.

EntryR (Aldehyde)Rʹ (Aniline)ProductTime (min)Yield[a] (%)M.p. (°C)TOF (min–1)
12-NO24-CH34a15088183-1850.56
24-SCH34-OCH34b15084190-1920.52
34-Cl4-OCH34c12092240-2420.77
43-NO24-CH34d13088188-1900.68
54-NO24-OCH34e12093237-2390.78
62,4-di-Cl4-CH34f12090198-2000.75
74-F4-OCH34g12089222-2240.73
84-CH34-CH34h12082205-2070.66

The reusability of Fe3O4@SiO2-L-proline nanoparticles was investigated for the reaction of 1,3-dimethylbarbituric acid, 4-chlorobenzaldehyde and 4-methoxy aniline. After completion of the reaction, the nanocatalyst was separated using an external magnet. The recovered magnetite nanoparticles were washed several times with ethanol and then dried at room temperature. Figure 8 shows that the nanocatalyst could be reused for six times with a minimal loss of activity.

Figure 8 Reusability of Fe3O4@SiO2-L-proline nanoparticles as catalyst for the synthesis of 4c.
Figure 8

Reusability of Fe3O4@SiO2-L-proline nanoparticles as catalyst for the synthesis of 4c.

FT-IR analysis before and after reuse of the Fe3O4@ SiO2-L-proline nanoparticles is shown in Figure 9. The nanoparticles remained unchanged before and after reaction. We suppose that, this is also the possible reason for the extreme stability of the Fe3O4@SiO2-L-proline nanoparticles presented herein. The extreme stability of the Fe3O4@SiO2-L-proline nanoparticles is mainspring of the continuous and high catalytic activity.

Figure 9 FT-IR analysis before and after reuse of the Fe3O4@SiO2-L-proline nanoparticles.
Figure 9

FT-IR analysis before and after reuse of the Fe3O4@SiO2-L-proline nanoparticles.

The proposed mechanism for the reaction is shown in Scheme 3. Initially, 1,3-dimethylbarbituric acid is reacted with aldehyde to form intermediate (I) via condensation reaction. Intermediate (I), in the presence of Fe3O4@SiO2- L-proline, is condensed with aniline derivatives to form intermediate (II). The migration of the hydrogen atom will provide the final product. It is assumed that catalytically active site of catalyst is contains SiO2 that acts as a Lewis acid and L-proline (−NH−) that acts as a Lewis basic. This proposed mechanism has also been supported by the literature (Fekri et al., 2019; Keshavarz et al., 2018; Safaei-Ghomi et al., 2017).

Scheme 3 Proposed reaction pathway for the synthesis of pyrimidines by nano-Fe3O4@SiO2-L-proline.
Scheme 3

Proposed reaction pathway for the synthesis of pyrimidines by nano-Fe3O4@SiO2-L-proline.

3 Conclusions

In conclusion, we have developed an effective method for the synthesis of pyrimidines using Fe3O4@SiO2-L-proline. The method offers several advantages containing high yields, cleaner reaction profiles, shorter reaction times, easy availability, reusability of the catalyst and low catalyst loading.

Experimental

Preparation of Fe3O4@SiO2-L-proline nanocatalyst

Firstly, nano-Fe3O4@SiO2 (1 g) were dispersed in dry ethanol (10mL) using an ultrasonic bath for 30 min.

Subsequently, L-proline (0.6 g) and H2SO4 (1 mL) were added to the solution of Fe3O4@SiO2 (1 g) and heated under reflux conditions. Then, the mixture was stirred for a further 12 h to allow for the completion of the reaction. The resulting magnetic nanoparticles were separated by external magnet and washed with ethanol and water before being dried in an oven at 60°C to give Fe3O4@SiO2- L-proline as a light brown powder.

General procedure for the preparation of pyrimidines

A mixture of 1,3-dimethylbarbituric acid (1 mmol), aromatic aldehydes (1 mmol) and 4-methyl aniline or 4-methoxy aniline (1 mmol) and Fe3O4@SiO2-L-proline (8 mg) were heated in EtOH (10 mL) under reflux conditions. The completion of the mixture was monitored by TLC and the catalyst was separated from reaction before work up by an external magnet field. The precipitate was washed with EtOH to afford the pure product.

Spectral data of products

5-((2-amino-5-methylphenyl)(2-nitrophenyl)methyl)-1,3-dimethylpyrimidine-2,4,6(1H,3H,5H)-trione (4a): Yellow solid; m. p. 183°C-185°C, – IR (KBr): ν = 3323, 3318, 2922, 1689, 1550, 1350 cm–1. – 1H NMR (400 MHz, [D6]DMSO): δ (ppm) = 2.99 (s, 3H, CH3), 3.33 (s, 6H, 2CH3), 5.33 (d, J = 8.8 Hz, 1H, CH), 5.47 (d, J = 8.8 Hz, 1H, CH), 6.99-7.47 (m, 7H, ArH), 9.18 (s, 2H, NH2). – 13C NMR (100 MHz, [D6]DMSO): δ (ppm) = 25.15, 31.76, 32.19, 43.73, 54.14, 121.20, 121.21, 125.15, 129.07, 129.11, 136.80, 136.82, 139.08, 142.20, 148.19, 154.19, 170.01.– Analysis for C20H20N4O5: calcd. C, 60.60; H, 5.09; N, 14.13, Found C, 60.52; H, 5.03; N, 14.05%.

5-((2-amino-5-methoxyphenyl)(4-(methylthio)phenyl) methyl)-1,3-dimethylpyrimidine-2,4,6 (1H,3H,5H)-trione (4b): Yellow solid; m. p. 190°C-192°C, – IR (KBr): ν = 3414, 2917, 1680, 1490, 1442, 816 cm–1. – 1H NMR (400 MHz, [D6] DMSO): δ (ppm) = 2.04 (s, 3H, CH3), 2.49 (s, 3H, CH3), 2.81 (s, 6H, 2CH3), 4.93 (d, J = 9.2 Hz, 1H, CH), 5.10 (d, J = 9.2 Hz, 1H, CH), 6.31-7.23 (m, 9H, ArH and NH2). – 13C NMR (100 MHz, [D6]DMSO): δ (ppm) = 22.12, 27.90, 28.54, 50.51, 59.12, 64.58, 121.98, 124.92, 125.85, 126.05, 127.54, 127.92, 128.08, 135.05, 138.12, 139.83, 142.53, 148.77, 164.63, 169.61. – Analysis for C21H23N3O4S: calcd. C, 61.00; H, 5.61; N, 10.16; S, 7.75, Found C, 61.09; H, 5.75; N, 10.19; S, 7.82%.

5-((2-amino-5-methoxyphenyl)(4-chlorophenyl) methyl)-1,3-dimethylpyrimidine-2,4,6 (1H,3H, 5H)-trione (4c): Yellow solid; m. p. 240°C-242°C, – IR (KBr): ν = 3343, 2925, 1667, 1493, 528 cm–1. – 1H NMR (400 MHz, [D6]DMSO): δ (ppm) = 2.80 (s, 6H, 2CH3), 2.96 (s, 3H, CH3), 4.80 (d, J = 10.2 Hz, 1H, CH), 5.12 (d, J = 10.2 Hz, 1H, CH), 6.49-7.43 (m, 9H, ArH and NH2). – 13C NMR (100 MHz, [D6]DMSO): δ (ppm) = 27.15, 28.14, 44.00, 51.50, 59.15, 111.49, 117.32, 120.31, 129.84, 130.01, 135.51, 138.42, 139.50, 145.01, 153.30, 157.49, 161.96.– Analysis for C20H20ClN3O4: calcd. C, 59.78; H, 5.02; N, 10.46, Found C, 59.82; H, 5.15; N, 10.58%.

5-((2-amino-5-methylphenyl)(3-nitrophenyl)methyl)-1,3-dimethylpyrimidine-2,4,6(1H,3H,5H)-trione (4d): Yellow solid; m. p. 188°C-190°C, – IR (KBr): ν = 3405, 2916, 1681, 1532, 1350, 1112 cm–1. – 1H NMR (400 MHz, [D6]DMSO): δ (ppm) = 2.06 (s, 3H, CH3), 2.75 (s, 3H, CH3), 2.77 (s, 3H, CH3), 5.06 (d, J = 8.8 Hz, 1H, CH), 5.33 (d, J = 8.8 Hz, 1H, CH), 6.31-8.26 (m, 9H, ArH and NH2). – 13C NMR (100 MHz, [D6]DMSO): δ (ppm) = 20.78, 27.98, 28.66, 49.32, 64.11, 122.02, 123.51, 124.77, 125.15, 128.07, 130.44, 130.77, 134.56, 138.86, 139.55, 142.78, 142.20, 153.01, 168.81.– Analysis for C20H20N4O5: calcd. C, 60.60; H, 5.09; N, 14.13, Found C, 60.75; H, 5.19; N, 14.25%.

5-((2-amino-5-methoxyphenyl)(4-nitrophenyl) methyl)-1,3-dimethylpyrimidine-2,4,6(1H,3H, 5H)-trione (4e): Yellow solid; m. p. 237°C-239°C, – IR (KBr): ν = 3473, 3073, 2955, 1667, 1524, 1349 cm–1. – 1H NMR (400 MHz, [D6] DMSO): δ (ppm) = 2.79 (s, 6H, 2CH3), 3.51 (s, 3H, CH3), 4.99 (d, J = 8.2 Hz, 1H, CH), 5.36 (d, J = 8.2 Hz, 1H, CH), 6.70-8.25 (m, 9H, ArH and NH2). – 13C NMR (100 MHz, [D6]DMSO): δ (ppm) = 28.01, 28.69, 50.06, 55.69, 59.15, 113.50, 113.63, 116.23, 122.30, 123.99, 129.14, 132.01, 132.09, 145.53, 147.51, 148.22, 148.41, 151.50, 168.74.– Analysis for C20H20N4O6: calcd. C, 58.25; H, 4.89; N, 13.59, Found C, 58.35; H, 4.95; N, 13.68%.

5-((2-amino-5-methylphenyl)(2,4-dichlorophenyl) methyl)-1,3-dimethylpyrimidine-2,4,6(1H,3H, 5H)-trione (4f): Yellow solid; m. p. 198°C-200°C, – IR (KBr): ν = 3294, 3203, 3067, 2921, 1683, 1474 cm–1. – 1H NMR (400 MHz, [D6] DMSO): δ (ppm) = 2.11 (s, 3H, CH3), 3.72 (s, 3H, CH3), 2.88 (s, 3H, 2CH3), 4.90 (d, J = 10.8 Hz, 1H, CH), 4.94 (d, J = 10.8 Hz, 1H, CH), 6.34-7.94 (m, 7H, ArH), 9.02 (s, 2H, NH2). – 13C NMR (100 MHz, [D6]DMSO): δ (ppm) = 20.23, 30.34, 40.53, 40.55, 52.95, 115.63, 124.86, 124.91, 125.22, 128.48, 129.77, 134.42, 135.05, 138.51, 138.51, 139.45, 145.06, 149.96, 158.46, 171.98.– Analysis for C20H19Cl2N3O3: calcd. C, 57.15; H, 4.56; N, 10.00, Found C, 57.05; H, 4.42; N, 10.15%.

5-((2-amino-5-methoxyphenyl)(4-fluorophenyl) methyl)-1,3-dimethylpyrimidine-2,4,6(1H,3H, 5H)-trione (4g): Yellow solid; m. p. 222°C-224°C, – IR (KBr): ν = 3376, 1686, 1524, 1464, 473 cm–1. – 1H NMR (400 MHz, [D6]DMSO): δ (ppm) = 2.80 (s, 3H, CH3), 2.82 (s, 3H, CH3), 3.51 (s, 3H, CH3), 5.04 (d, J = 10.8 Hz, 1H, CH), 5.36 (d, J = 10.8 Hz, 1H, CH), 6.70-8.25 (m, 9H, ArH and NH2). – 13C NMR (100 MHz, [D6]DMSO): δ (ppm) = 28.05, 28.69, 50.66, 55.69, 59.15, 113.15, 113.63, 116.23, 122.30, 123.96, 129.14, 132.01, 132.09, 145.53, 147.51, 148.32, 149.41, 151.50, 168.74.– Analysis for C20H20FN3O4: calcd. C, 62.33; H, 5.23; N, 10.90, Found C, 62.45; H, 5.35; N, 10.98%.

5-((2-amino-5-methylphenyl)(p-tolyl)methyl)-1,3-dimethylpyrimidine-2,4,6(1H,3H,5H)-trione (4h): Yellow solid; m. p. 205°C-207°C, – IR (KBr): ν = 3376, 1686, 1524, 1464, 473 cm–1. – 1H NMR (400 MHz, [D6]DMSO): δ (ppm) = 2.82 (s, 3H, CH3), 2.84 (s, 3H, CH3), 2.92 (s, 6H, CH3), 4.95 (d, J = 10.2 Hz, 1H, CH), 5.04 (d, J = 10.2 Hz, 1H, CH), 6.72-7.50 (m, 9H, ArH and NH2). – 13C NMR (100 MHz, [D6] DMSO): δ (ppm) = 22.20, 25.03, 28.67, 51.66, 58.60, 60.15, 115.18, 116.73, 117.20, 122.32, 123.95, 129.14, 132.01, 132.09, 145.53, 147.51, 148.32, 149.41, 151.50, 168.74.– Analysis for C21H23N3O3: calcd. C, 69.02; H, 6.34; N, 11.50;, Found C, 69.15; H, 6.42; N, 11.65%.


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Acknowledgement

The authors are grateful to University of Kashan for supporting this work by Grant NO: 159196/XXI.

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Received: 2019-10-29
Accepted: 2020-06-29
Published Online: 2020-07-29

© 2020 Safaei-Ghomi and Samadi, published by De Gruyter

This work is licensed under the Creative Commons Attribution 4.0 International License.

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