Development and validation of a 2nd tier test for identification of purine nucleoside phosphorylase deficiency patients during expanded newborn screening by liquid chromatography-tandem mass spectrometry
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Giancarlo la Marca
, Elisa Giocaliere
Abstract
Background: Purine nucleoside phosphorylase (PNP) deficiency has been recently introduced in the newborn screening program in Tuscany. In order to improve the PNP screening efficiency, we developed a 2nd tier test to quantify PNP primary markers deoxyguanosine (dGuo) and deoxyinosine (dIno).
Methods: Dried blood spots (DBS) samples were extracted with 200 μL of methanol and 100 μL of water (by two steps). Internal standards were added at a final concentration of 10 μmol/L. After extraction, samples were analysed by LC-MS/MS. The chromatographic run was performed in gradient mode by using a Synergi Fusion column.
Results: The assay was linear over a concentration range of 0.05–50 μmol/L (R2>0.999) for dGuo and 0.5–50 μmol/L (R2>0.998) for dIno. Intra- and interassay imprecision (mean CVs) for dIno and dGuo ranged from 2.9% to 12%. Limit of quantitaion (LOQ) were found to be 0.05 μmol/L and 0.5 μmol/L for dGuo and dIno, respectively. The reference ranges, obtained by measuring dGuo and dIno concentrations on DBS, were close to zero for both biomarkers. Moreover, DBS samples from seven patients with confirmed PNP were retrospectively evaluated and correctly identified.
Conclusions: The LC-MS/MS method can reliably measure dIno and dGuo in DBS for the diagnosis of PNP. Validation data confirm the present method is characterised by good reproducibility, accuracy and imprecision for the quantitation of dIno and dGuo. The assay also appears suitable for use in monitoring treatment of PNP patients.
Acknowledgments
The authors want to thank Prof. Micheal Hershfield from the department of Medicine, Duke University, Durham, USA; Dr. Carsten Speckmann from Center for Chronic Immunodeficiences, University of Freiburg, Germany; Dr. Andrew R. Gennery from the Insitute of Cellular Medicine, Newcastle University, UK; Dr. Fatih Celmeli from Antalya Education and Research Hospital, Antalya, Turkey for providing PNP patient’ samples.
Author contributions: All the authors have accepted responsibility for the entire content of this submitted manuscript and approved submission.
Research funding: None declared.
Employment or leadership: None declared.
Honorarium: None declared.
Competing interests: The funding organization(s) played no role in the study design; in the collection, analysis, and interpretation of data; in the writing of the report; or in the decision to submit the report for publication.
References
1. Markert ML. Purine nucleoside phosphorylase deficiency. Immunodefic Rev 1991;3:45–81.Suche in Google Scholar
2. Elder M. T-cell immunodeficiencies. Pediatr Clin N Am 2000;47:1253–74.10.1016/S0031-3955(05)70270-4Suche in Google Scholar
3. Cohen A, Gudas A, Ammann A, Staal G, Martin D. Deoxyguanosine triphosphate as a possible toxic metabolite in the immunodeficiency associated with purine nucleoside phosphorylase deficiency. J Clin Invest 1978;61: 1405–9.10.1172/JCI109058Suche in Google Scholar PubMed PubMed Central
4. Parvaneh N, Tabatabaei P, Pourakbari B, Tamizifar B, Mamishi S, Teimourian S, et al. Novel mutations of NP in two patients with purine nucleoside phosphorylase deficiency. Clin Biochem 2008;41:350–2.10.1016/j.clinbiochem.2007.11.007Suche in Google Scholar PubMed
5. Al-Saud B, Alsmadi O, Al-Muhsen S, Al-Ghonaium A, Al-Dhekri H, Arnaout R, et al. A novel mutation in purine nucleoside phosphorylase in a child with normal uric acid levels. Clin Biochem 2009;42:1725–7.10.1016/j.clinbiochem.2009.08.017Suche in Google Scholar PubMed
6. Walker PL, Corrigan A, Arenas M, Escuredo E, Fairbanks L, Marinaki A. Purine nucleoside phosphorylase deficiency: a mutation update. Nucleosides Nucleotides Nucleic Acids 2011;30:1243–7.10.1080/15257770.2011.630852Suche in Google Scholar PubMed
7. 7. Notarangelo LD. Primary immunodeficiencies. J Allergy Clin Immunol 2010;125:182–94.10.1016/j.jaci.2009.07.053Suche in Google Scholar PubMed
8. Somech R, Lev A, Grisaru-Soen G, Shiran SI, Simon AJ, Grunebaum E. Purine nucleoside phosphorylase deficiency presenting as severe combined immune deficiency. Immunol Res 2013;56:150–4.10.1007/s12026-012-8380-9Suche in Google Scholar PubMed
9. Hershfield M. Combined immune deficiencies due to purine enzyme defects. In: Stiehm ER, Ochs HD, Winkelstein JA, editors. Immunologic disorders in infants and children, 5th ed. Philadelphia, PA: Elsevier, 2004:480–504.Suche in Google Scholar
10. Puck JM. Neonatal Screening for Severe Combined Immunodeficiency (SCID). Curr Opin Pediatr 2011;23:667–73.10.1097/MOP.0b013e32834cb9b0Suche in Google Scholar PubMed PubMed Central
11. la Marca G, Canessa C, Giocaliere E, Romano F, Duse M, Malvagia S, et al. Tandem mass spectrometry, but not T-cell receptor excision circle analysis, identifies newborns with late-onset adenosine deaminase deficiency. J Allergy Clin Immunol 2013;131:1604–10.10.1016/j.jaci.2012.08.054Suche in Google Scholar PubMed
12. Azzari C, la Marca G, Resti M. Neonatal screening for severe combined immunodeficiency caused by an adenosine deaminase defect: a reliable and inexpensive method using tandem mass spectrometry. J Allergy Clin Immunol 2011;127:1394–9.10.1016/j.jaci.2011.03.040Suche in Google Scholar PubMed
13. la Marca G, Giocaliere E, Malvagia S, Funghini S, Ombrone D, Della Bona ML, et al. The inclusion of ADA-SCID in expanded newborn screening by tandem mass spectrometry. J Pharm Biomed Anal 2014;88:201–6.10.1016/j.jpba.2013.08.044Suche in Google Scholar PubMed
14. la Marca G, Canessa C, Giocaliere E, Romano F, Malvagia S, Funghini S, et al. Diagnosis of immunodeficiency caused by a purine nucleoside phosphorylase defect by using tandem mass spectrometry on dried blood spots. J Allergy Clin Immunol 2014;134:155–9.10.1016/j.jaci.2014.01.040Suche in Google Scholar PubMed
15. Ombrone D, Giocaliere E, Forni G, Malvagia S, la Marca G. Expanded newborn screening by mass spectrometry: new tests, future perspectives. Mass Spectrom Rev 2015;9999:1–14.Suche in Google Scholar
16. International Conference on Harmonisation of technical requirements for registration of pharmaceuticals for human use. ICH harmonized tripartite guideline: Guideline for Good Clinical Practice. J Postgrad Med 2001;47: 45–50.Suche in Google Scholar
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- EFLM Survey
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- Genetics and Molecular Diagnostics
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