Direct way to anomalous scatterers
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Z. Dauter
Abstract
The first step in solving macromolecular crystal structures by multi- or single-wavelength anomalous diffraction methods is the location of the anomalous scatterers. This can be done by direct methods, using either Bijvoet differences within the single data set, or anomalous scattering amplitudes estimated from measurements at several wavelengths. The calculations suggest that Bijvoet differences are equally successful for this purpose as anomalous amplitudes, FA, which theoretically should be more suitable. The calculation of FA values is susceptible to the accumulation of errors contained in the individual intensity measurements at several wavelengths and in the inaccurate estimation of the anomalous atomic scattering corrections, f′ and f″. Direct methods often give better results at resolution lower than the full extent of the diffraction data limit. This may be attributed to the enhanced accuracy of measurements of the strong, low resolution reflections and to more effective phase refinement and propagation through Σ2 relations.
© 2002 Oldenbourg Wissenschaftsverlag GmbH
Artikel in diesem Heft
- Preface: Macromolecular Crystallography
- More power for direct methods: SIR2002
- ACORN — theory and practice
- Macromolecular phasing with SHELXE
- Physical measurement of triplet invariants: present state of the experiment, data evaluation and future perspectives
- Qantitative determination of phase for macromolecular crystals using multiple diffraction methods and dynamical theory
- Ab initio phasing starting from low resolution
- Towards automated protein structure determination: BnP, the SnB-PHASES interface
- Direct way to anomalous scatterers
- The approach of the joint probability distribution functions: the SIR-MIR, SAD-MAD and SIRAS-MIRAS, cases
- Direct-method phasing of anomalous diffraction from proteins
- Molecular replacement and high-throughput structure determination
Artikel in diesem Heft
- Preface: Macromolecular Crystallography
- More power for direct methods: SIR2002
- ACORN — theory and practice
- Macromolecular phasing with SHELXE
- Physical measurement of triplet invariants: present state of the experiment, data evaluation and future perspectives
- Qantitative determination of phase for macromolecular crystals using multiple diffraction methods and dynamical theory
- Ab initio phasing starting from low resolution
- Towards automated protein structure determination: BnP, the SnB-PHASES interface
- Direct way to anomalous scatterers
- The approach of the joint probability distribution functions: the SIR-MIR, SAD-MAD and SIRAS-MIRAS, cases
- Direct-method phasing of anomalous diffraction from proteins
- Molecular replacement and high-throughput structure determination
