Abstract
Instrumental variables allow for quantification of cause and effect relationships even in the absence of interventions. To achieve this, a number of causal assumptions must be met, the most important of which is the independence assumption, which states that the instrument and any confounding factor must be independent. However, if this independence condition is not met, can we still work with imperfect instrumental variables? Imperfect instruments can manifest themselves by violations of the instrumental inequalities that constrain the set of correlations in the scenario. In this article, we establish a quantitative relationship between such violations of instrumental inequalities and the minimal amount of measurement dependence required to explain them for the case of discrete observed variables. As a result, we provide adapted inequalities that are valid in the presence of a relaxed measurement dependence assumption in the instrumental scenario. This allows for the adaptation of existing and new lower bounds on the average causal effect for instrumental scenarios with binary outcomes. Finally, we discuss our findings in the context of quantum mechanics.
1 Introduction
Inferring causal relations from data is a central goal in any empirical science. Yet, in spite of its importance, causality has remained a thorny issue. Misled by the commonplace sentence stating that “correlation does not imply causation,” causal inference persists in the view of many as a noble but practically impossible task. Contrary to that, however, the surge and development of the causality theory [1,2] has proven formal conditions under which cause and effect relations can be extracted.
Consider the simplest and fundamental question of deciding whether observed correlations between two variables,
An elegant way to circumvent such issues is the instrumental variables [1,5,6, 7,8,9, 10,11]. If a proper instrument
Motivated by these questions, we analyze in detail a generalization of the instrumental causal structure, where we drop the assumption that one has a perfect instrument. More specifically, we relax the assumption that the instrumental variable
Finally, we make a connection with the field of quantum foundations, where violation of instrumental inequalities can appear without relaxing the measurement independence assumption [15,16, 17,18]. Using our results, we establish the minimal measurement dependence needed in the classical instrumental scenario to explain such violations and, as a result, we analyze the robustness of instrumental tests as witnesses of nonclassical behavior.
The article is organized as follows. In Section 2, we discuss how instrumental variables can be employed to put lower bounds on the cause and effect relations between two variables. In Section 3, we discuss the violations of independence assumption and how modified instrumental inequalities and causal bounds on ACE can be derived to take that into account. In Section 4, we discuss quantum violations of the modified inequalities. In Section 5, we discuss our findings and point out interesting questions for future research.
Notations: Throughout the article, we denote random variables by capital letters
2 Instrumental variables, instrumental inequalities, and causal bounds
Before getting into details and illustrating the power of an instrumental variable as a causal inference tool, we discuss a simple linear structural model,
More formally, an instrumental variable
Typically, instead of looking at the joint distribution

Causal graphs describing the instrumental scenario and its relaxations. Circular nodes correspond to observed variables, and rectangular ones are latent. Directed edges represent the causal links. (a) The instrumental scenario: the controlled variable
The set of probability distributions of the form in equation (2) is bounded in the space of all possible distributions
Importantly, the instrumental variable can be used for causal inference even in the absence of structural models, something typical in the context of quantum information and refereed there as the device-independent framework [22,23]. In particular, simply from the observed data distribution
in which
and
As shown in ref. [3], for the case of binary random variables
The bound above is particularly relevant because it shows that the effect of interventions can be inferred simply from the observational data. Thus, instrumental variables offer a central tool for situation where interventions are not possible.
The bound in equation (6) is one of the eight expressions given in ref. [3], which provide nontrivial lower bounds on
and the ones obtained by relabeling of the values of
For the case of more general random variables (not only binary), one can obtain a system of linear inequalities of the form
where
In this work, we focus on the case where the variables
3 Relaxing the independence assumption
For the causal bounds such as in equation (6) to hold, one has to guarantee that the instrumental causal assumptions are fulfilled. If any instrumental inequality such as in equation (3) is violated by the observed data distribution
For instance, the violation of an instrumental inequality could be motivated by a direct causal influence of
In order to facilitate our analysis, we focus on the DAG including an additional causal link between a latent variable
In the following, we argue that without loss of generality, we can consider the response functions
where
It is convenient to treat a realization of
where we use the same notation
where
In analogy to ref. [17], we use a common measure of dependence between
Crucially to our subsequent analysis, we cast it as the
where
Before stating our results, we note that in the literature there are a number of studies dealing with the estimation of causal effects when some assumptions are relaxed. A standard tool is that of the potential outcomes model. Considering a binary treatment A, this model implies that
where
Note that the scenario with of a direct cause from
is the same set as that of the model where
where in the second step we have simply chosen

Causal graphs describing a noncausal instrumental variable, where the correlations between
3.1 Quantifying violation of the independence assumption
The observed correlations in the instrumental experiment given by the observed probability distribution
In this article, taking a purely classical perspective on causality, we aim to quantify how much of the above-mentioned violation translates into a relaxation of the independence assumption. More precisely, we aim to find the minimal amount of dependence necessary to explain the violation of either instrumental inequalities or causal bounds.
Given a linear inequality valid for the instrumental scenario
Note that the normalization of
Observation 1
The minimal dependence needed to explain a fixed violation
To see that this statement holds, first we bring the problem in equation (18) to a standard primal form of an LP [50].
In the aforementioned LP, we used the following notations.
Below, we give the corresponding dual LP to the one in equation (19),
In the above, we introduced the notation
We can see from the above dual formulation of the LP that the solution must be piecewise linear in
Since any solution of the above LP, defining the slope
Finally, we must note that the primal problem is feasible, if the violation
3.2 Dependencies in the simplest instrumental scenario
Building on the results of this section, here we investigate the minimal required dependence for a fixed violation of instrumental inequalities and bounds on ACE in the simplest instrumental scenario when all the observed random variables are binary. For the both types of inequalities, namely instrumental inequality in equation (3) and causal bound in equation (6), we give exact solutions to the corresponding LPs in equation (20).
Lemma 2
For the instrumental scenario with binary observed random variables
See Appendix A for the proof. We conclude that for a given violation
Next we investigate how the violation of the lower bound on ACE as in equation (6) translates to the required measurement dependence.
Lemma 3
For the instrumental scenario with binary observed random variables
See Appendix B for the proof. Until now, we asked a question which degree of measurement dependence is required to explain violation of a linear inequality (e.g., instrumental inequalities or causal bounds) and we gave an analytical solution for the simplest scenario with binary observed variables. One can, however, ask the reverse question of how the linear inequalities change in the simplest instrumental scenario, if some level of measurement dependence is present in a given setup. This is the inverse problem to the one considered in this section. Since both of these problems aim at estimating the same dependency, they have the same solution, namely the piecewise linear dependence in Observation 1. As a result, we can derive adapted linear inequalities (e.g., binary instrumental inequalities and causal bounds) that accounts for the dependence between
Corollary 3.1
Given a linear inequality valid for the simplest instrumental scenario,
where
The above corollary shows that one can still infer cause and effect relations even with nonperfect instruments. Also note that in case of independence,
For a more general case, when the instrumental variable can take more than two values, adapting a linear inequality valid for the perfect instrumental scenario is also possible. However, it is a more involving task as the minimal measurement dependence does not have to be linear in the observed violation, as pointed out in Observation 1. We give numerical treatment for this problem in Section 3.4 and in Figure 3.

Measurement dependence
3.3 Informational cost
Above, we used the
If no dependence between
Lemma 4
For the instrumental scenario with binary observed random variables
See Appendix C for the proof. The same result applies to any of the four instrumental inequalities in equation (3).
3.4 Beyond the binary case
So far, we have restricted our attention to the case where all variables are binary. Here, we generalize the results for the instrumental variable, which can take more values.
Concerning instrumental inequalities, if the variables
and the third one is Kedagni’s inequality [11],
One can obtain other inequalities from refs [11,13] by relabeling inputs and outputs and by coarse graining values of
Considering the case where
For all the causal bounds and the instrumental inequalities we use the LP in equation (18) to estimate the minimal measurement dependency in order to explain the violation by the amount of
Even though we only provide analytical solutions of the LPs in the simplest binary case, in more general scenarios, it is sufficient to solve LPs only in a very few points due to the nature of the functional dependence being convex piecewise linear. For example, for the instrumental inequality
4 Quantum violations of instrumental tests
We saw that the instrumental and causal bounds can be violated if a certain amount of measurement dependence is present between an instrumental variable and a common cause
More precisely, the postulates of quantum theory impose that (i) the state of a physical system is described by a positive, trace-1 linear operator, known as the density matrix
where
Remember that the bounds such as instrumental inequalities and causal bounds derived in refs [3,11,13] assume that the latent node is a classical random variable. Consequently, they can all be systematically obtained using linear programming (for the case of discrete observed random variables). On the other hand, once we allow quantum common causes and use Born’s rule for probabilities, the description of the set of all possible observed distributions
Interestingly, in the case of the simplest instrumental scenario, the statistics obtained from a latent quantum state cannot violate the instrumental inequalities in equation (3) and no further analysis on minimal measurement dependency is required. Thus, in the simplest instrumental scenario, inequalities can be violated only if causal assumptions are relaxed.
This is no longer the case for the causal bounds on ACE in the simplest instrumental scenario. Refs [23,48] show that in the case of binary observed variables, the causal bound in equation (6) can be violated if the common cause is a quantum state (without any measurement dependence). In order to demonstrate such a violation, in a full analogy with the classical case, one can define (see ref. [47]) interventions on a classical random variable
The identity operator
Ref. [48] considered the following quantum causal model. The common cause is given by a pure two-qubit entangled state (rank-1 density operator with both Hilbert spaces being two-dimensional complex vector spaces
In ref. [48] it was shown that for all
We use the results of the previous sections to explain the maximal known quantum violation in the classical instrumental scenario with the relaxed measurement independence assumption: the amount of minimum measurement dependency in the classical instrumental causal structure must at least be
In case of more general instrumental scenario, where
Finally, we consider the quantum violation of the causal bounds for the instrument that takes three values. The inequality
5 Discussion
Instrumental variables offer ways to estimate causal influence even under confounding effects and without the need for interventions. Strikingly, as discovered in ref. [3], one can infer the effect of interventions, without resorting to any structural equations, simply from observational data obtained with the help of an instrument. As already recognized long ago [57], however, “the real difficulty in practice of course is actually finding variables to play the role of instruments.” Since the potential correlation of the instrument with any latent variables is in principle unobservable, it might seem that the exogeneity of a given instrument is a matter of trust and intuition rather than a fact supported by the data.
Motivated by this fundamental problem, the data from an instrumental test [11,12, 13,14] can be employed to benchmark the amount of dependence the instrument can have with a confounding variable. More precisely, we quantify such correlations via a
Relying on an LP description, we obtain fully analytical results for the simplest instrumental scenario where all variables are binary. We study a more general case of trinary instrumental variable numerically using our linear programming technique. In parallel, we also derived new bounds for the ACE (equation (25)), which to the best of our knowledge are new to the literature. We also consider applications of our generalized instrumental inequalities and causal bounds to consider the problem of measurement independence (also known as “free-will”) in the foundations of quantum physics.
It is interesting to compare the lower bounds on the dependence between
It is worth noting that the effect of imperfect instruments has previously been considered [6,58,59, 60,61]. Those works, however, relied on a number of additional assumptions, for instance, the study in [59] was limited to regression bivariate models, while here our results are free of any structural equations and valid for any causal mechanisms between the variables. Even though we have focused on the case where treatment and effect variables are binary, the LP framework we propose can also be extended to variables assuming any discrete number of values (limited, of course, by the computational complexity of the problem). Another interesting question for future research is to understand whether similar results may hold for the case of continuous variables or consider statistical tests as in ref. [62], a direction that we hope might be triggered by our results.
Acknowledgments
The authors thank anonymous Referees for providing useful comments and numerous interesting references. We acknowledge partial support by the Foundation for Polish Science (IRAP project, ICTQT, contract no. MAB/2018/5, co-financed by EU within Smart Growth Operational Programme). N.M. is funded by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation), project number 441423094. This work was supported by the John Templeton Foundation via the grant Q-CAUSAL No 61084 (the opinions expressed in this publication are those of the author(s) and do not necessarily reflect the views of the John Templeton Foundation) Grant Agreement No. 61466, by the Serrapilheira Institute (grant number Serra – 1708–15763), by the Simons Foundation (Grant Number 884966, AF), the Brazilian National Council for Scientific and Technological Development (CNPq) via the National Institute for Science and Technology on Quantum Information (INCT-IQ) and Grant Nos. 406574/2018-9 and 307295/2020-6, the Brazilian agencies MCTIC and MEC. M.G. is funded by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) under Germany’s Excellence Strategy – Cluster of Excellence Matter and Light for Quantum Computing (ML4Q) EXC 2004/1 – 390534769.
-
Conflict of interest: Authors state no conflict of interest.
Appendix A Proof of Lemma 2
Proof
All the binary instrumental inequalities are given in equation (3). We choose one of them (the results work for any other choice too, due to symmetry present in the problem) and insert it into the primal problem,
In the dual LP in equation (20), the matrix
From the definition of
Here
By summing the first and the last inequalities for
Using the upper-bound on
As the final step, we note that the assignment:
B Proof of Lemma 3
Proof
The proof has a similar structure as the one of Lemma 2; however, it is more involving. The main reason for this is that the expression
The matrix
where we denoted by
First, we derive an upper-bound on
For
which means that
Inserting this value in the objective function, we obtain,
The last step follows as
C Proof of Lemma 4
Proof
We rewrite the conditional join probabilities occurring in the expression
where
The last inequality follows since we are only interested in the cases when
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- Causation and decision: On Dawid’s “Decision theoretic foundation of statistical causality”
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- Commentary
- Comment on: “Decision-theoretic foundations for statistical causality”
- Decision-theoretic foundations for statistical causality: Response to Shpitser
- Decision-theoretic foundations for statistical causality: Response to Pearl
- Special Issue on Integration of observational studies with randomized trials
- Identifying HIV sequences that escape antibody neutralization using random forests and collaborative targeted learning
- Estimating complier average causal effects for clustered RCTs when the treatment affects the service population
- Causal effect on a target population: A sensitivity analysis to handle missing covariates
- Doubly robust estimators for generalizing treatment effects on survival outcomes from randomized controlled trials to a target population