Translation termination and protein folding pathway genes are not correlated in gastric cancer
-
Joana Malta-Vacas
Abstract
Background: The eukaryotic release factor 3 (eRF3) has been shown to affect both tubulin and actin cytoskeleton, suggesting a role in cytoskeleton assembly, mitotic spindle formation and chromosome segregation. Also, direct interactions between eRF3 and subunits of the cytosolic chaperonin CCT have been described. Moreover, both eRF3a and CCT subunits have been described to be up-regulated in cancer tissues. Our aim was to evaluate the hypothesis that eRF3 expression levels are correlated with the expression of genes encoding proteins involved in the tubulin folding pathways.
Methods: Relative expression levels of eRF1, eRF3a/GSPT1, PFDN4, CCT2, CCT4, and TBCA genes in tumour samples relative to their adjacent normal tissues were investigated using real time-polymerase chain reaction in 20 gastric cancer patients.
Results: The expression levels of eRF3a/GSPT1 were not correlated with the expression levels of the other genes studied. However, significant correlations were detected between the other genes, both within intestinal and diffuse type tumours.
Conclusions: eRF3a/GSPT1 expression at the mRNA level is independent from both cell translation rates and from the expression of the genes involved in tubulin-folding pathways. The differences in the patterns of expression of the genes studied support the hypothesis of genetically independent pathways in the origin of intestinal and diffuse type gastric tumours.
Clin Chem Lab Med 2009;47:427–31.
©2009 by Walter de Gruyter Berlin New York
Artikel in diesem Heft
- Minireview
- Risk loci for type 2 diabetes – Quo vadis?
- Genetics and Molecular Diagnostics
- A common variant in the FTO gene is associated with body mass index in males and postmenopausal females but not in premenopausal females. Czech post-MONICA and 3PMFs studies
- Genotype distribution of estrogen receptor α polymorphisms in pregnant women from healthy and preeclampsia populations and its relation to blood pressure levels
- Do common genetic variants in endotoxin signaling pathway contribute to predisposition to alcoholic liver cirrhosis?
- The selection and application of ssDNA aptamers against MPT64 protein in Mycobacterium tuberculosis
- Stromal cell-derived factor-1 but not its receptor, CXCR4, gene variants increase susceptibility and pathological development of hepatocellular carcinoma
- Expression of lineage markers using real-time quantitative polymerase chain reaction (RT-qPCR) in normal and in leukemia bone marrow
- Translation termination and protein folding pathway genes are not correlated in gastric cancer
- General Clincial Chemistry and Laboratory Medicine
- Novel serum paraoxonase activity assays are associated with coronary artery disease
- Elevated erythrocyte carbonic anhydrase activity is a novel clinical marker in hyperventilation syndrome
- Elevation of the glycoxidation product Nε-(carboxymethyl)lysine in patients presenting with acute myocardial infarction
- Lipoprotein(a) level and its association with tumor stage in male patients with primary lung cancer
- A high-performance liquid chromatography method for the determination of carbamazepine and carbamazepine-10,11-epoxide and its comparison with chemiluminescent immunoassay
- Reference Values and Biological Variations
- Minimizing the effects of multicollinearity in the polynomial regression of age relationships and sex differences in serum levels of pregnenolone sulfate in healthy subjects
- Determination of physiological plasma pentraxin 3 (PTX3) levels in healthy populations
- Validation and Outcome Studies
- Analytical precision of the Urolizer® for the determination of the BONN-Risk-Index (BRI) for calcium oxalate urolithiasis and evaluation of the influence of 24-h urine storage at moderate temperatures on BRI
- Determination of nitrotyrosine concentrations in plasma samples of diabetes mellitus patients by four different immunoassays leads to contradictive results and disqualifies the majority of the tests
- Estimation of trueness of measurement results obtained in external quality assessment
- Letters to the Editor
- A new PCR-RFLP assay for –1123 G>C polymorphism in the PTPN22 gene: allele and genotype frequencies in a western Mexican population
- Proposed classification of various limit values (guide values) used in assisting the interpretation of quantitative laboratory test results
- Case report: Over-substitution of thyroxine due to interference in serum thyroid-stimulating hormone measurement
- Rv2629 191A/C nucleotide change is not associated with rifampicin resistance in Mycobacterium tuberculosis
Artikel in diesem Heft
- Minireview
- Risk loci for type 2 diabetes – Quo vadis?
- Genetics and Molecular Diagnostics
- A common variant in the FTO gene is associated with body mass index in males and postmenopausal females but not in premenopausal females. Czech post-MONICA and 3PMFs studies
- Genotype distribution of estrogen receptor α polymorphisms in pregnant women from healthy and preeclampsia populations and its relation to blood pressure levels
- Do common genetic variants in endotoxin signaling pathway contribute to predisposition to alcoholic liver cirrhosis?
- The selection and application of ssDNA aptamers against MPT64 protein in Mycobacterium tuberculosis
- Stromal cell-derived factor-1 but not its receptor, CXCR4, gene variants increase susceptibility and pathological development of hepatocellular carcinoma
- Expression of lineage markers using real-time quantitative polymerase chain reaction (RT-qPCR) in normal and in leukemia bone marrow
- Translation termination and protein folding pathway genes are not correlated in gastric cancer
- General Clincial Chemistry and Laboratory Medicine
- Novel serum paraoxonase activity assays are associated with coronary artery disease
- Elevated erythrocyte carbonic anhydrase activity is a novel clinical marker in hyperventilation syndrome
- Elevation of the glycoxidation product Nε-(carboxymethyl)lysine in patients presenting with acute myocardial infarction
- Lipoprotein(a) level and its association with tumor stage in male patients with primary lung cancer
- A high-performance liquid chromatography method for the determination of carbamazepine and carbamazepine-10,11-epoxide and its comparison with chemiluminescent immunoassay
- Reference Values and Biological Variations
- Minimizing the effects of multicollinearity in the polynomial regression of age relationships and sex differences in serum levels of pregnenolone sulfate in healthy subjects
- Determination of physiological plasma pentraxin 3 (PTX3) levels in healthy populations
- Validation and Outcome Studies
- Analytical precision of the Urolizer® for the determination of the BONN-Risk-Index (BRI) for calcium oxalate urolithiasis and evaluation of the influence of 24-h urine storage at moderate temperatures on BRI
- Determination of nitrotyrosine concentrations in plasma samples of diabetes mellitus patients by four different immunoassays leads to contradictive results and disqualifies the majority of the tests
- Estimation of trueness of measurement results obtained in external quality assessment
- Letters to the Editor
- A new PCR-RFLP assay for –1123 G>C polymorphism in the PTPN22 gene: allele and genotype frequencies in a western Mexican population
- Proposed classification of various limit values (guide values) used in assisting the interpretation of quantitative laboratory test results
- Case report: Over-substitution of thyroxine due to interference in serum thyroid-stimulating hormone measurement
- Rv2629 191A/C nucleotide change is not associated with rifampicin resistance in Mycobacterium tuberculosis