Startseite Identification of two novel variants in GNPTAB underlying mucolipidosis II in a Pakistani family
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Identification of two novel variants in GNPTAB underlying mucolipidosis II in a Pakistani family

  • Muhammad Aman Khan , Bibi Zubaida , Noreen Karim , Huma Arshad Cheema und Muhammad Naeem EMAIL logo
Veröffentlicht/Copyright: 1. April 2020

Abstract

Background

Mucolipidosis II is a rare inherited metabolic disorder characterized by multiple pathologies including coarse facial features, thickened skin, dysostosis multiplex, and skeletal abnormalities. The disorder results due to variants in GNPTAB leading to reduced activity of the enzyme GlcNAc-1-phosphotransferase (GlcNAc-PT).

Methods

In the present study, a consanguineous Pakistani family was diagnosed with MLII based on clinical and biochemical examination. Peripheral blood samples were collected and subjected to DNA sequencing of all coding exons along with exon-intron boundaries of GNPTAB.

Results

Molecular investigation of the family identified two novel variants c.25C > T: p.Gln9* (maternal allele) in exon 1 and c.1160C > T: p.Ala387Val (paternal allele) in exon 10 segregating in compound heterozygous form in the affected individuals.

Conclusions

The GNPTAB variant c.25C > T variant is highly plausible to undergo nonsense-mediated mRNA decay, while the GNPTAB variant c.1160C > T is located in a highly conserved domain, thus both the variants predict to lead to affect the enzyme activity. Two novel variants have been identified in GNPTAB as the underlying cause of ML-II in a Pakistani family. The study thus expands the available GNPTAB mutation spectrum.


Corresponding author: Muhammad Naeem, PhD, Tenured Professor, Medical Genetics Research Laboratory, Department of Biotechnology, Quaid-i-Azam University, Islamabad, Pakistan, Phone: +925190644122
aMuhammad Aman Khan, Bibi Zubaida and Noreen Karim contributed equally to this work.

Acknowledgments

The authors are grateful to all the individuals who participated in the study. Muhammad Aman Khan is supported by the Indigenous PhD Fellowship from the Higher Education Commission of Pakistan.

  1. Author contributions: Muhammad Aman Khan: data curation, methodology, conceptualization. Bibi Zubaida: patient recruitment, methodology, conceptualization, writing – review and edit. Noreen Karim: conceptualization, methodology, writing – original draft, review, and edit. Huma Arshad Cheema: patient recruitment, conceptualization, clinical and diagnostic study. Muhammad Naeem: conceptualization, funding acquisition, methodology, supervision, writing – review and edit. All authors have accepted responsibility for the entire content of this submitted manuscript and approved submission.

  2. Research funding: None declared.

  3. Employment or leadership: None declared.

  4. Honorarium: None declared.

  5. Competing interests: The funding organization(s) played no role in the study design; in the collection, analysis, and interpretation of data; in the writing of the report; or in the decision to submit the report for publication.

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Received: 2019-09-13
Accepted: 2020-02-06
Published Online: 2020-04-01
Published in Print: 2020-05-26

©2020 Walter de Gruyter GmbH, Berlin/Boston

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