Startseite Analysis of the bacterial communities in the waterlogged wooden cultural relics of the Xiaobaijiao No. 1 shipwreck via high-throughput sequencing technology
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Analysis of the bacterial communities in the waterlogged wooden cultural relics of the Xiaobaijiao No. 1 shipwreck via high-throughput sequencing technology

  • Qiuxia Li , Lixiang Cao , Wenfeng Wang , Hongming Tan , Tao Jin , Guangyuan Wang , Guocong Lin und Runlin Xu EMAIL logo
Veröffentlicht/Copyright: 15. März 2018
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Holzforschung
Aus der Zeitschrift Holzforschung Band 72 Heft 7

Abstract

The microbial impact on waterlogged wooden cultural relics from Xiaobaijiao No. 1 shipwreck was investigated by means of a high-throughput sequencing technology, while the focus was on the composition of prokaryotic microorganisms in 10 wood samples collected from different parts of the shipwreck. A total of 28 501 different operational taxonomic units (OTUs) were obtained based on 97% sequence similarity. The α-diversity index is for the bacterial diversity, which was the highest and the lowest in the samples SS8 and SS5, respectively. Proteobacteria was the largest category of bacterial abundance (47.3%) followed by Bacteroidetes (10%). α-Proteobacteria was the first largest bacteria class with the maximum abundance (21.0%) followed by γ-Proteobacteria (16.9%). Other groups rich in the following species were found: Bacteroidales (13.3%), Thiotrichales (5.0%), Rhodobacterales (4.2%), Rhizobiales (4.0%), Chromatiales (3.5%), Oceanospirillales (3.3%), Flavobacteriales (2.9%) and Sphingomonadales (2.8%). At the level of the bacterial genus, Marinomonas was the most abundant one. Phylogenetic analysis revealed that there are some differences in the composition of bacterial communities from different wood samples. The species number of bacteria in the relics of this shipwreck was far more than that reported in those found in Europe, and in which species composition was similar to the benthic bacteria in the corresponding sea area. The coexistence of anaerobic and aerobic bacteria is remarkable.

Keywords: bacterial taxa; high-throughput sequencing technology; waterlogged archeological wood (WAW); Xiaobaijiao No. 1 shipwreck

Acknowledgments

This work was funded by the special research project of underwater heritage protection from the State Administration of Cultural Heritage of China (Project no.: 2013-538).

  1. Author contributions: All the authors have accepted responsibility for the entire content of this submitted manuscript and approved submission.

  2. Research funding: The special research project of underwater heritage protection from the State Administration of Cultural Heritage of China (Project No.: 2013-538).

  3. Employment or leadership: None declared.

  4. Honorarium: None declared.

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Received: 2017-08-23
Accepted: 2018-02-14
Published Online: 2018-03-15
Published in Print: 2018-07-26

©2018 Walter de Gruyter GmbH, Berlin/Boston

Artikel in diesem Heft

  1. Frontmatter
  2. Original Articles
  3. Analysis of the bacterial communities in the waterlogged wooden cultural relics of the Xiaobaijiao No. 1 shipwreck via high-throughput sequencing technology
  4. Determination of the country of origin of true mahogany (Swietenia macrophylla King) wood in five Latin American countries using handheld NIR devices and multivariate data analysis
  5. Poly(dimethyldiallylammonium chloride) (polyDADMAC) assisted cellulase pretreatment for microfibrillated cellulose (MFC) preparation and MFC analysis
  6. Carbohydrate content of black liquor and precipitated lignin at different ionic strengths in flow-through kraft cooking
  7. Influence of moisture content on the results of penetration and withdrawal resistance measurements on softwoods
  8. The effect of high voltage electrostatic field (HVEF) treatment on bonding interphase characteristics among different wood sections of Masson pine (Pinus massoniana Lamb.)
  9. Influence of hygrothermal condition on dynamic viscoelasticity of Chinese fir (Cunninghamia lanceolata). Part 1: moisture adsorption
  10. Influence of hygrothermal condition on dynamic viscoelasticity of Chinese fir (Cunninghamia lanceolata). Part 2: moisture desorption
  11. Effects of a layered structure on the physicomechanical properties and extended creep behavior of bamboo-polypropylene composites (BPCs) determined by the stepped isostress method
  12. Preparation of slow release nanopesticide microspheres from benzoyl lignin
https://doi.org/10.1515/hf-2017-0132
Schlagwörter für diesen Artikel
bacterial taxa; high-throughput sequencing technology; waterlogged archeological wood (WAW); Xiaobaijiao No. 1 shipwreck

Artikel in diesem Heft

  1. Frontmatter
  2. Original Articles
  3. Analysis of the bacterial communities in the waterlogged wooden cultural relics of the Xiaobaijiao No. 1 shipwreck via high-throughput sequencing technology
  4. Determination of the country of origin of true mahogany (Swietenia macrophylla King) wood in five Latin American countries using handheld NIR devices and multivariate data analysis
  5. Poly(dimethyldiallylammonium chloride) (polyDADMAC) assisted cellulase pretreatment for microfibrillated cellulose (MFC) preparation and MFC analysis
  6. Carbohydrate content of black liquor and precipitated lignin at different ionic strengths in flow-through kraft cooking
  7. Influence of moisture content on the results of penetration and withdrawal resistance measurements on softwoods
  8. The effect of high voltage electrostatic field (HVEF) treatment on bonding interphase characteristics among different wood sections of Masson pine (Pinus massoniana Lamb.)
  9. Influence of hygrothermal condition on dynamic viscoelasticity of Chinese fir (Cunninghamia lanceolata). Part 1: moisture adsorption
  10. Influence of hygrothermal condition on dynamic viscoelasticity of Chinese fir (Cunninghamia lanceolata). Part 2: moisture desorption
  11. Effects of a layered structure on the physicomechanical properties and extended creep behavior of bamboo-polypropylene composites (BPCs) determined by the stepped isostress method
  12. Preparation of slow release nanopesticide microspheres from benzoyl lignin
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