Phylogeny of new marine Dothideomycetes and Sordariomycetes from mangroves and deep-sea sediments

References

Abdel-Wahab, M.A., D.C. Dayarathne, S. Suetrong, S.Y. Guo, S.A. Alias, A.H. Bahkali, T. Nagahama, A.M. Elgorban, F.A. Abdel-Aziz, M.S. Hodhod, M.O. Al-Hebshi, K.D. Hyde, N.A.B.M. Nor, K.L. Pang and E.B.G. Jones. 2017. New saprobic marine fungi and a new combination. Bot. Mar. 60: 469−488.10.1515/bot-2016-0118Search in Google Scholar

Amend, A., G. Burgaud, M. Cunliffe, V.P. Edgcomb, C.L. Ettingerc, M.H. Gutiérrez, J. Heitman, E.F.Y. Hom, G. Ianiri, A.C. Jones, K. Kagami, K.P. Picard, C.A. Quandt, S. Raghukumar, M. Riquelme, J. Stajich, J. Vargas-Muñiz, A.K. Walker, O. Yarden and A.S. Gladfelter. 2019. Fungi in the marine environment: open questions and unsolved problems. mBio 10: R189−R204.10.1128/mBio.01189-18Search in Google Scholar PubMed PubMed Central

Ariyawansa, H.A., K.D. Hyde, S.C. Jayasiri, B. Buyck, K.W.T. Chethana, D.Q. Dai, Y.C. Dai, D.A. Daranagama, R.S. Jayawardena, R. Lücking, M. Ghobad-Nejhad, T. Niskanen, K.M. Thambugala, K. Voigt, R.L. Zhao, G.J. Li, M. Doilom, S. Boonmee, Z.L. Yang, Q. Cai, Y.Y. Cui, A.H. Bahkali, J. Chen, B.K. Cui, J.J. Chen, M.C. Dayarathne, A.J. Dissanayake, A.H. Ekanayaka, A. Hashimoto, S. Hongsanan, E.B.G. Jones, E. Larsson, W.J. Li, Q.R. Li, J.K. Liu, Z.L. Luo, S.S.N. Maharachchikumbura, A. Mapook, E.H.C. McKenzie, C. Norphanphoun, S. Konta, K.L. Pang, R.H. Perera, R. Phookamsak, C. Phukhamsakda, U. Pinruan, E. Randrianjohany, C. Singtripop, K. Tanaka, C.M. Tian, S. Tibpromma, M.A. Abdel-Wahab, D.N. Wanasinghe, N.N. Wijayawardene, J.F. Zhang, H. Zhang, F.A. Abdel-Aziz, M. Wedin, M. Westberg, J.F. Ammirati, T.S. Bulgakov, D.X. Lima, T.M. Callaghan, P. Callac, C.H. Chang, L.F. Coca, M. Dal-Forno, V. Dollhofer, K. Fliegerová, K. Greiner, G.W. Griffith, H.M. Ho, V. Hofstetter, R. Jeewon, J.C. Kang, T.C. Wen, P.M. Kirk, I. Kytövuori, J.D. Lawrey, J. Xing, H. Li, Z.Y. Liu, X.Z. Liu, K. Liimatainen, H. Thorsten Lumbsch, M. Matsumura, B. Moncada, S. Nuankaew, S. Parnmen, A.L.C.M. de Azevedo Santiago, S. Sommai, Y. Song, C.A.F. de Souza, C.M. de Souza-Motta, H.Y. Su, S. Suetrong, Y. Wang, W.S. Fong, H.S. Yuan, L.W. Zhou, M. Réblová, J. Fournier, E. Camporesi, J.J. Luangsa-ard, K. Tasanathai, A. Khonsanit, D. Thanakitpipattana, S. Somrithipol, P. Diederich, A.M. Millanes, R.S. Common, M. Stadler, J.Y. Yan, X.H. Li, H.W. Lee, T.T.T. Nguyen, H.B. Lee, E. Battistin, O. Marsico, A. Vizzini, J. Vila, E. Ercole, U. Eberhardt, G. Simonini, H.A. Wen and X.H. Chen. 2015. Fungal diversity notes 111–252 – taxonomic and phylogenetic contributions to fungal taxa. Fungal Divers. 75: 27–274.10.1007/s13225-015-0346-5Search in Google Scholar

Asgari, B., R. Zare and W. Gams. 2007. Coniochaeta ershadii, a new species from Iran, and a key to well-documented Coniochaeta species. Nova Hedw. 84: 175−187.10.1127/0029-5035/2007/0084-0175Search in Google Scholar

Bonorden, H.F. 1851. Handbuch der allgemeinen Mykologie. Schweizerbart’sche Verlagshandlung, Stuttgart. pp. 1−336.Search in Google Scholar

Cain, R.F. 1961. Studies of soil fungi: iii. new species of Coniochaeta, Chaetomidium, and Thielavia. Can. J. Bot. 39: 1231–1239.10.1139/b61-107Search in Google Scholar

Checa J., J.M. Barrasa, G. Moreno, F. Fort and J. Guarro. 1988. The genus Coniochaeta (Sacc.) Cooke (Coniochaetaceae, Ascomycotina) in Spain. Cryptog. Mycol. 9: 1–34.Search in Google Scholar

Crous, P.W., M.J. Wingfield, T.I. Burgess, G.E. Hardy, C. Crane, S. Barrett, J.F. Cano-Lira, J.J. Le Roux, R. Thangavel, J. Guarro, A.M. Stchigel, M.P. Martín, D.S. Alfredo, P.A. Barber, R.W. Barreto, I.G. Baseia, J. Cano-Canals, R. Cheewangkoon, R.J. Ferreira, J. Gené, C. Lechat, G. Moreno, F. Roets, R.G. Shivas, J.O. Sousa, Y.P. Tan, N.P. Wiederhold, S.E. Abell, T. Accioly, J.L. Albizu, J.L. Alves, Z.I. Antoniolli, N. Aplin, J. Araújo, M. Arzanlou, J.D.P. Bezerra, J.P. Bouchara, J.R. Carlavilla, A. Castillo, V.L. Castroagudín, P.C. Ceresini, G.F. Claridge, G. Coelho, V.R.M. Coimbra, L.A. Costa, K.C. da Cunha, S.S. da Silva, R. Daniel, Z.W. de Beer, M. Dueñas, J. Edwards, P. Enwistle, P.O. Fiuza, J. Fournier, D. García, T.B. Gibertoni, S. Giraud, M. Guevara-Suárez, L.F.P. Gusmão, S. Haituk, M. Heykoop, Y. Hirooka, T.A. Hofmann, J. Houbraken, D.P. Hughes, I. Kautmano vá, O. Koppel, O. Koukol, E. Larsson, K.P.D. Latha, D.H. Lee, D.O. Lisboa, W.S. Lisboa, Á. López-Villalba, J.L.N. Maciel, N.P. Manimohan, J.L. Manjón, S. Marincowitz, T.S. Marney, M. Meijer, A.N. Miller, I. Olariaga, L.M. Paiva, M. Piepenbring, J.C. Poveda-Molero, K.N.A. Raj, H.A. Raja, A. Rougeron, I. Salcedo, R. Samadi, T.A.B. Santos, K. Scarlett, K.A. Seifert, L.A. Shuttleworth, G.A. Silva, M. Silva, J.P.Z. Siqueira, C.M. Souza-Motta, S.L. Stephenson, D.A. Sutton, N. Tamakeaw, M.T. Telleria, N. Valenzuela-Lopez, A.Viljoen, C.M. Visagie, A. Vizzini, F. Wartchow, B.D. Wingfield, E. Yurchenko, J.C. Zamora and J.Z. Groenewald. 2016. Fungal Planet description sheets: 469–557. Persoonia 37: 218−403.10.3767/003158516X694499Search in Google Scholar PubMed PubMed Central

Damare, S., C. Raghukumar and S. Raghukumar. 2006. Fungi in deep-sea sediments of the Central Indian Basin. Deep-Sea Res. I 53: 14–27.10.1016/j.dsr.2005.09.005Search in Google Scholar

Damm, U., P.H. Fourie and P.W. Crous. 2010. Coniochaeta (Lecythophora), Collophora gen. nov. and Phaeomoniella species associated with wood necroses of Prunus trees. Persoonia 24: 60–80.10.3767/003158510X500705Search in Google Scholar PubMed PubMed Central

Devadatha, B., V.V. Sarma, H.A. Ariyawansa and E.B.G. Jones. 2018. Deniquelata vittalii sp. nov., a novel Indian saprobic marine fungus on Suaeda monoica and two new records of marine fungi from Muthupet mangroves, East coast of India. Mycosphere 9: 565–582.10.5943/mycosphere/9/3/8Search in Google Scholar

Eriksson, O.E., H.O. Baral, R.S. Currah, K. Hansen, C.P. Kurtzman, G. Rambold and T. Laessøe. 2004. Outline of the Ascomycetes – 2004. Myconet 10: 1–99.Search in Google Scholar

García, D., A.M. Stchigel, J. Cano, M. Calduch, D.L. Hawksworth and J. Guarro. 2006. Molecular phylogeny of Coniochaetales. Mycol. Res. 110: 1271–1289.10.1016/j.mycres.2006.07.007Search in Google Scholar PubMed

Garzoli, L., A. Poli, V. Prigione, G. Gnavi and G.C. Varese. 2018. Peacock’s tail with a fungal cocktail: first assessment of the mycobiota associated with the brown alga Padina pavonica. Fungal Ecol. 35: 87–97.10.1016/j.funeco.2018.05.005Search in Google Scholar

Gerlach, W. and H. Nirenberg. 1982. The genus Fusarium – a pictorial atlas. Mitteilungen aus der Biologischen Bundesanstalt fur Land- und Forstwirtschaft Berlin-Dahlem 209: 1–406.10.2307/3792677Search in Google Scholar

Gladfelter, A.S., T.Y. James and A.S. Amend. 2019. Marine fungi. Curr. Biol. 29: R191–R195.10.1016/j.cub.2019.02.009Search in Google Scholar

Gräfenhan, T., H.J. Schroers, H.I. Nirenberg and K.A. Seifert. 2011. An overview of the taxonomy, phylogeny, and typification of nectriaceous fungi in Cosmospora, Acremonium, Fusarium, Stilbella, and Volutella. Stud. Mycol. 68: 79−113.10.3114/sim.2011.68.04Search in Google Scholar

Hongsanan, S., S.S.N. Maharachchikumbura, K.D. Hyde, M.C. Samarakoon, R. Jeewon, Q. Zhao, A.M. Al-Sadi and A.H. Bahkali. 2017. An updated phylogeny of Sordariomycetes based on phylogenetic and molecular clock evidence. Fungal Divers. 84: 25–41.10.1007/s13225-017-0384-2Search in Google Scholar

Huang, S.K., R. Jeewon, K.D. Hyde, D.J. Bhat and T.C. Wen. 2018. Novel taxa within Nectriaceae: Cosmosporella gen. nov. and Aquanectria sp. nov. from freshwater habitats in China. Crypto. Mycol. 39: 169–192.10.7872/crym/v39.iss2.2018.169Search in Google Scholar

Huhndorf, S.M., A.N. Miller and F.A. Fernández. 2004. Molecular systematics of the Sordariales: the order and the family Lasiosphaeriaceae redefined. Mycologia 96: 368–387.10.2307/3762068Search in Google Scholar

Hyde, K.D. 1991. Helicascus kanaloanus, Helicascus nypae sp. nov. and Salsuginea ramicola gen. et sp. nov. from intertidal mangrove wood. Bot. Mar. 34: 311–318.10.1515/botm.1991.34.4.311Search in Google Scholar

Hyde, K.D. 1992. Intertidal mangrove fungi from the west coast of Mexico, including one new genus and two new species. Mycol. Res. 96: 25−30.10.1016/S0953-7562(09)80992-1Search in Google Scholar

Hyde, K.D. and E.B.G. Jones. 1988. Marine mangrove fungi. P.S.Z.N.I.: Mar. Ecol. 9: 15–33.10.1111/j.1439-0485.1988.tb00196.xSearch in Google Scholar

Hyde, K.D., E.B.G. Jones, J.K. Liu, H.A. Ariyawansa, E. Boehm, S. Boonmee, U. Braun, P. Chomnunti, P.W. Crous, D.Q. Dai, P. Diederich, A.J. Dissanayake, M. Doilom, F. Doveri, S. Hongsanan, R. Jayawardena, J.D. Lawrey, Y.M. Li, Y.X. Liu, R. Lücking, J. Monkai, L. Muggia, M.P. Nelsen, K.L. Pang, R. Phookamsak, I. Senanayake, C.A. Shearer, S. Seutrong, K. Tanaka, K.M. Thambugala, D.N.N. Wijayawardene, S. Wikee, H.X. Wu, Y. Zhang, B. Aguirre-Hudson, S.A. Alias, A. Aptroot, A.H. Bahkali, J.L. Bezerra, J.D. Bhat, E. Camporesi, E. Chukeatirote, C. Gueidan, D.L. Hawksworth, K. Hirayama, S. De Hoog, J.C. Kang, K. Knudsen, W.J. Li, X.H. Li, Z.Y. Liu, A. Mapook, E.H.C. McKenzie, A.N. Miller, P.E. Mortimer, A.J.L. Phillips, H.A. Raja, C. Scheuer, F. Schumm, J.E. Taylor, Q. Tian, S. Tibpromma, D.N. Wanasinghe, Y. Wang, J.C. Xu, J.Y. Yan, S. Yacharoen and M. Zhang. 2013. Families of Dothideomycetes. Fungal Divers. 63: 1–313.10.1007/s13225-013-0263-4Search in Google Scholar

Hyde, K.D., C. Norphanphoun, V.P. Abreu, A. Bazzicalupo, K.W. Thilini Chethana, M. Clericuzio, M.C. Dayarathne, A.J. Dissanayake, A.H. Ekanayaka, M.Q. He, S. Hongsanan, S.K. Huang, S.C. Jayasiri, R.S. Jayawardena, A. Karunarathna, S. Konta, L. Kušan, H. Lee, J.F. Li, C.G. Lin, N.G. Liu, Y.Z. Lu, Z.L. Luo, I.S. Manawasinghe, A. Mapook, R.H. Perera, R. Phookamsak, C. Phukhamsakda, L. Siedlecki, A.M. Soares, D.S. Tennakoon, Q. Tian, S. Tibpromma, D.N. Wanasinghe, Y.P. Xiao, J. Yang, X.Y. Zeng, F.A. Abdel-Aziz, W.J. Li, I.C. Senanyake, Q.J. Shang, D.A. Daranagama, N.I. de Silva, K.M. Thambugala, M.A. Abdel-Wahab, A.H. Bahkali, M.L. Berbee, S. Boonmee, D.J. Bhat, T.S. Bulgakov, B. Buyck, E. Camporesi, R.F. Castañeda-Ruiz, P. Chomnunti, M. Doilom, F. Dovana, T.B. Gibertoni, M, Jadan, R. Jeewon, E.B.G. Jones, J.C. Kang, S.C. Karunarathna, Y.W. Lim, J.K. Liu, Z.Y. Liu, H.L. Plautz Jr., S. Lumyong, S.S.N. Maharachchikumbura, N. Matočec, E.H.C. McKenzie, A. Mešić, D. Miller, J. Pawłowska, Q.L. Pereira, I. Promputtha, A.I. Romero, L. Ryvarden, H.Y. Su, S. Suetrong, Z. Tkalčec, A. Vizzini, T.C. Wen, K. Wisitrassameewong, M. Wrzosek, J.C. Xu, Q. Zhao, R.L. Zhao and P.E. Mortimer. 2017. Fungal diversity notes 603–708: taxonomic and phylogenetic notes on genera and species. Fungal Divers. 87: 1–235.10.1007/s13225-017-0391-3Search in Google Scholar

Hyde, K.D., N. Chaiwan, C. Norphanphoun, S. Boonmee, E. Camporesi, K.W.T. Chethana, M.C. Dayarathne, N.I. de Silva, A.J. Dissanayake, A.H. Ekanayaka, S. Hongsanan, S.K. Huang, S.C. Jayasiri, R.S. Jayawardena, H.B. Jiang, A. Karunarathna, C.G. Lin, J.K. Liu, N.G. Liu, Y.Z. Lu, Z.L. Luo, S.S.N. Maharachchimbura, I.S. Manawasinghe, D. Pem, R.H. Perera, C. Phukhamsakda, M.C. Samarakoon, C. Senwanna, Q.J. Shang, D.S. Tennakoon, K.M. Thambugala, S. Tibpromma, D.N. Wanasinghe, Y.P. Xiao, J. Yang, X.Y. Zeng, J.F. Zhang, S.N. Zhang, T.S. Bulgakov, D.J. Bhat, R. Cheewangkoon, T.K. Goh, E.B.G. Jones, J.C. Kang, R. Jeewon, Z.Y. Liu, S. Lumyong, C.H. Kuo, E.H.C. McKenzie, T.C. Wen, J.Y. Yan and Q. Zhao. 2018. Mycosphere notes 169–224. Mycosphere 9: 271–430.10.5943/mycosphere/9/2/8Search in Google Scholar

Jones, E.B.G. 2011. Are there more marine fungi to be described? Bot. Mar. 54: 343–354.10.1515/bot.2011.043Search in Google Scholar

Jones, E.B.G. and K.D. Hyde. 1988. Methods for the study of mangrove marine fungi from the mangroves. In: (A.D. Agate, C.V. Subramanian and M. Vannucci, eds) Mangrove microbiology. Role of microorganisms in nutrient cycling of mangrove soils and waters. UNDP. UNESCO, New Delhi. pp. 9–27.Search in Google Scholar

Jones, E.B.G. and K.L. Pang. 2012. Introduction. In: (E.B.G. Jones and K.L. Pang, eds) Marine fungi and fungal-like organisms. De Gruyter, Germany. pp. 1–13.10.1515/9783110264067Search in Google Scholar

Jones, E.B.G. and K.L. Pang. 2017. Recent advances in marine mycology. Bot. Mar. 60: 361–367.10.1515/bot-2017-0048Search in Google Scholar

Jones, E.B.G., J. Sakayaroj, S. Suetrong, S. Somrithipol and K.L. Pang. 2009. Classification of marine Ascomycota, anamorphic taxa and Basidiomycota. Fungal Divers. 35: 1–187.Search in Google Scholar

Jones, E.B.G., S. Suetrong, J. Sakayaroj, A.H. Bahkali, M.A. Abdel-Wahab, T. Boekhout and K.L. Pang. 2015. Classification of marine Ascomycota, Basidiomycota, Blastocladiomycota and Chytridiomycota. Fungal Divers. 73: 1–72.10.1007/s13225-015-0339-4Search in Google Scholar

Jones, E.B.G., K.L. Pang, M.A. Abdel-Wahab, B. Scholz, K.D. Hyde, T. Boekhout, R. Ebel, M.E. Rateb, L. Henderson, J. Sakayaroj, S. Suetrong, M.C. Dayarathne, V. Kumar, S. Raghukumar, K.R. Sridhar, A.H. Bahkali1, F. Gleason and C. Norphanphoun. 2019. An online resource for marine fungi. Fungal Divers. 96: 347–433.10.1007/s13225-019-00426-5Search in Google Scholar

Khan, Z., J. Gené, S. Ahmad, J. Cano, N. Al-Sweih, L. Joseph, R. Chandy and J. Guarro. 2013. Coniochaeta polymorpha, a new species from endotracheal aspirate of a preterm neonate, and transfer of Lecythophora species to Coniochaeta. Anton. van Leeuw. 104: 243–252.10.1007/s10482-013-9943-zSearch in Google Scholar PubMed

Khao L.V., K. Hatai, A. Yuasa and K. Sawada. 2005. Morphology and molecular phylogeny of Fusarium solani isolated from kuuruma prawn Penaeus japonicas with black gills. Fish Pathol. 40: 103–109.10.3147/jsfp.40.103Search in Google Scholar

Kirk, P.M., P.F. Cannon, J.C. David and J.A. Stalpers. 2001. Ainsworth & Bisby’s dictionary of the fungi. 9th edition. CABI Publishing, Wallingford. pp. 655.Search in Google Scholar

Kirk, P.M., P.F. Cannon, D.W. Minter and J.A. Stalpers. 2008. Dictionary of the fungi. 10th edition. CABI, Wallingford. pp. 771.Search in Google Scholar

Kohlmeyer, J. and B. Volkmann-Kohlmeyer. 1991. Illustrated key to the filamentous higher marine fungi. Bot. Mar. 34: 1–61.10.1515/botm.1991.34.1.1Search in Google Scholar

Lechat, C. and A. Rossman. 2017. A new species of Fusicolla (Hypocreales), F. ossicola, from Belgium. Ascomycete.org 9: 225–228.Search in Google Scholar

Li, G.J., K.D. Hyde, R.L. Zhao, S. Hongsanan, F.A. Abdel-Aziz, M.A. Abdel-Wahab, P. Alvarado, G. Alves-Silva, S.F. Ammirati, H.A. Ariyawansa, A. Baghela, A.H. Bahkali, M. Beug, D.J. Bhat, D. Bojantchev, T. Boonpratuang, T.S. Bulgakov, E. Camporesi, M.C. Boro, O. Ceska, D. Chakraborty, J.J. Chen, K.W.T. Chethana, P. Chomnunti, G. Consiglio, B.K. Cui, D.Q. Dai, Y.C. Dai, D.A. Daranagama, K. Das, M.C. Dayarathne, E. De Crop, R.J.V. De Oliveira, C.A.F. de Souza, J.I. de Souza, B.T.M. Dentinger, A.J. Dissanayake, M. Doilom, E.R. Drechsler-Santos, M. Ghobad-Nejhad, S.P. Gilmore, A. Góes-Neto, M. Gorczak, C.H. Haitjema, K.K. Hapuarachchi, A. Hashimoto, M.Q. He, J.K. Henske, K. Hirayama, M.J. Iribarren, S.C. Jayasiri, R.S. Jayawardena, S.J. Jeon, G.H. Jerônimo, A.L. Jesus, E.B.G. Jones, J.C. Kang, S.C. Karunarathna, P.M. Kirk, S. Konta, E. Kuhnert, E. Langer, H.S. Lee, H.B. Lee, W.J. Li, X.H. Li, K. Liimatainen, D.X. Lima, C.G. Lin, J.K. Liu, X.Z. Liu, Z.Y. Liu, J.J. Luangsa-ard, R. Lücking, H.T. Lumbsch, S. Lumyong, E.M. Leaño, A.V. Marano, M. Matsumura, E.H.C. McKenzie, S. Mongkolsamrit, P.E. Mortimer, T.T.T. Nguyen, T. Niskanen, C. Norphanphoun, M.A. O’Malley, S. Parnmen, J. Pawłowska, R.H. Perera, R. Phookamsak, C. Phukhamsakda, C.L.A. Pires-Zottarelli, O. Raspé, M.A. Reck, S.C.O. Rocha, A.L.C.M.A. de Santiago, I.C. Senanayake, L. Setti, Q.J. Shang, S.K. Singh, E.B. Sir, K.V. Solomon, J. Song, P. Srikitikulchai, M. Stadler, S. Suetrong, H. Takahashi, T. Takahashi, K. Tanaka, L.P. Tang, K.M. Thambugala, D. Thanakitpipattana, M.K. Theodorou, B. Thongbai, T. Thummarukcharoen, Q. Tian, S. Tibpromma, A. Verbeken, A. Vizzini, J. Vlasák, K. Voigt, D.N. Wanasinghe, Y. Wang, G. Weerakoon, H.A. Wen, T.C. Wen, N.N. Wijayawardene, S. Wongkanoun, M. Wrzosek, Y.P. Xiao, J.C. Xu, J.Y. Yan, J. Yang, S.D. Yang, Y. Hu, J.F. Zhang, J. Zhao, L.W. Zhou, D. Peršoh, A.J.L. Phillips and S.S.N. Maharachchikumbura. 2016. Fungal diversity notes 253–366: taxonomic and phylogenetic contributions to fungal taxa. Fungal Divers. 78: 1–237.10.1007/s13225-016-0366-9Search in Google Scholar

Liu, Y.J., S. Whelen and B.D. Hall. 1999. Phylogenetic relationships among ascomycetes: evidence from an RNA polymerse II subunit. Mol. Biol. Evol. 16: 1799–1808.10.1093/oxfordjournals.molbev.a026092Search in Google Scholar PubMed

Liu, J.K., K.D. Hyde, R. Jeewon, A.J.L. Phillips, S.S.N. Maharachchikumbura, M. Ryberg, Z.Y. Liu and Q. Zhao. 2017. Ranking higher taxa using divergence times: a case study in Dothideomycetes. Fungal Divers. 84: 75–99.10.1007/s13225-017-0385-1Search in Google Scholar

Maharachchikumbura, S.S.N., K.D. Hyde, E.B.G. Jones, E.H.C. McKenzie, S.K. Huang, M.A. Abdel-Wahab, D.A. Daranagama, M. Dayarathne, M.J. D’Souza, I.D. Goonasekara, S. Hongsanan, R.S. Jayawardena, P.M. Kirk, S. Konta, J.K. Liu, Z.Y. Liu, C. Norphanphoun, K.L. Pang, R.H. Perera, I.C. Senanayake, Q. Shang, B.D. Shenoy, Y.P. Xiao, A.H. Bahkali, J.C. Kang, S. Somrothipol, S. Suetrong, T.C. Wen and J.C. Xu. 2015. Towards a natural classification and backbone tree for Sordariomycetes. Fungal Divers. 72: 199–301.10.1007/s13225-015-0331-zSearch in Google Scholar

Maharachchikumbura, S.S.N., K.D. Hyde, E.B.G. Jones, E.H.C. McKenzie, J.D. Bhat, M.C. Dayarathne, S.K. Huang, C. Norphanphoun, I.C. Senanayake, R.H. Perera, Q.J. Shang, Y. Xiao, M.J. D’souza, S. Hongsanan, R.S. Jayawardena, D.A. Daranagama, S. Konta, I.D. Goonasekara, W.Y. Zhuang, R. Jeewon, A.J.L. Phillips, M.A. Abdel-Wahab, A.M. Al-Sadi, A.H. Bahkali, S. Boonmee, N. Boonyuen, R. Cheewangkoon, A.J. Dissanayake, J. Kang, Q.R. Li, J.K. Liu, X.Z. Liu, Z.Y. Liu, J.J. Luangsa-ard, K.L. Pang, R. Phookamsak, I. Promputtha, S. Suetrong, M. Stadler, T.C. Wen and N.N. Wijayawardene. 2016. Families of Sordariomycetes. Fungal Divers. 79: 1–317.10.1007/s13225-016-0369-6Search in Google Scholar

Miller, A.N., S.M. Huhndorf and J. Fournier. 2014. Phylogenetic relationships of five uncommon species of Lasiosphaeria and three new species in the Helminthosphaeriaceae (Sordariomycetes). Mycologia 106: 505–524.10.3852/13-223Search in Google Scholar PubMed

Pang, K.L., J.S. Jheng and E.B.G. Jones. 2011. Marine mangrove fungi of Taiwan. National Taiwan Ocean University, Chilung. pp. 1–131.Search in Google Scholar

Perdomo, H., D. García, J. Gené, J. Cano, D.A. Sutton, R. Summerbell and J. Guarro. 2013. Phialemoniopsis, a new genus of Sordariomycetes, and new species of Phialemonium and Lecythophora. Mycologia 105: 398–421.10.3852/12-137Search in Google Scholar PubMed

Raghukumar, S. 2017. The marine environment and the role of fungi. In: (S. Raghukumar, ed) Fungi in coastal and oceanic marine ecosystems. Springer, Cham. pp. 17–38.10.1007/978-3-319-54304-8_2Search in Google Scholar

Rehner, S.A. and E. Buckley. 2005. A Beauveria phylogeny inferred from nuclear ITS and EF1-α sequences: evidence for cryptic diversification and links to Cordyceps teleomorphs. Mycologia 97: 84–98.10.3852/mycologia.97.1.84Search in Google Scholar PubMed

Saccardo, P.A. 1878. Fungi Italici autographice delineati a Prof. P.A. Saccardo. Patavii 1878. – Fascicoli V.-VIII. Michelia 1: 326–350.Search in Google Scholar

Samarakoon, M.C., Y. Gafforov, N. Liu, S.S. Maharachchikumbura, J.D. Bhat, J.K. Liu, I. Promputtha and K.D. Hyde. 2018. Combined multi-gene backbone tree for the genus Coniochaeta with two new species from Uzbekistan. Phytotaxa 336: 43–58.10.11646/phytotaxa.336.1.3Search in Google Scholar

Sarmiento-Ramírez, J.M., E. Abella, M.P. Martín, M.T. Tellería, L.F. López-Jurado, A. Marco and J. Diéguez-Uribeondo. 2010. Fusarium solani is responsible for mass mortalities in nests of loggerhead sea turtle, Caretta caretta, in Boavista, Cape Verde. FEMS Microbiol. Lett. 312: 192−200.10.1111/j.1574-6968.2010.02116.xSearch in Google Scholar

Suetrong, S., C.L. Schoch, J.W. Spatafora, J. Kohlmeyer, B. Volkmann-Kohlmeyer, J. Sakayaroj, S. Phongpaichit, K. Tanaka, K. Hirayama and E.B.G. Jones. 2009. Molecular systematics of the marine Dothideomycetes. Stud. Mycol. 64: 155–173.10.3114/sim.2009.64.09Search in Google Scholar

Suetrong, S., K.D. Hyde, Y. Zhang, A.H. Bahkali and E.B.G. Jones. 2011. Trematosphaeriaceae fam. nov. (Dothideomycetes, Ascomycota). Cryptog. Mycol. 32: 343−358.10.7872/crym.v32.iss4.2011.343Search in Google Scholar

Swofford, D.L. 2002. PAUP*. Phylogenetic analysis using parsimony (*and other methods). Version 4. Sinauer Associates, Sunderland, Massachusetts, USA.Search in Google Scholar

Trouillas, F.P., WM. Pitt, M.R. Sosnowski, R. Huang, F. Peduto, A. Loschiavo, S. Savocchia and F.S. Scott. 2011. Taxonomy and DNA phylogeny of Diatrypaceae associated with Vitis vinifera and other woody plants in Australia. Fungal Divers. 49: 203–223.10.1007/s13225-011-0094-0Search in Google Scholar

Troy, G.C., D.L. Panciera, J.P. Pickett, D.A. Sutton, J. Gene, J.F. Cano, J. Guarro, E.H. Thompson and B.L. Wickes. 2013. Mixed infection caused by Lecythophora canina sp. nov. and Plectosphaerella cucumerina in a German shepherd dog. Med. Mycol. 51: 455−460.10.3109/13693786.2012.754998Search in Google Scholar

Tubaki, K., C. Booth and T. Harada. 1976. A new variety of Fusarium merismoides. Trans. Br. Mycol. Soc. 66: 355−356.10.1016/S0007-1536(76)80072-1Search in Google Scholar

Vázquez-Campos, X., A.S. Kinsela, T.D. Waite, R.N. Collins and B.A. Neilan. 2014. Fodinomyces uranophilus gen. nov. sp. nov. and Coniochaeta fodinicola sp. nov., two uranium mine-inhabiting Ascomycota fungi from northern Australia. Mycologia 106: 1073–1089.10.3852/14-013Search in Google Scholar PubMed

Vilgalys, R. and M. Hester. 1990. Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. J. Bacteriol. 172: 4238–4246.10.1128/jb.172.8.4238-4246.1990Search in Google Scholar PubMed PubMed Central

Wanasinghe, D.N., R. Jeewon, S. Tibpromma, E.B.G. Jones and K.D. Hyde. 2017. Saprobic Dothideomycetes in Thailand: Muritestudina gen. et sp. nov. (Testudinaceae) a new terrestrial pleosporalean ascomycete, with hyaline and muriform ascospores. Stud. Fungi 2: 219–234.10.5943/sif/2/1/26Search in Google Scholar

Wanasinghe, D.N., C. Phukhamsakda, K.D. Hyde, R. Jeewon, H.B. Lee, E.B.G. Jones, S. Tibpromma, D.S. Tennakoon, A.J. Dissanayake, S.C. Jayasiri, Y. Gafforov, E. Camporesi, T.S. Bulgakov, A.H. Ekanayake, R.H. Perera, M.C. Samarakoon, I.D. Goonasekara, A. Mapook, W.J. Li, I.C. Senanayake, J.F. Li, C. Norphanphoun, M. Doilom, A.H. Bahkali, J.C. Xu, P.E. Mortimer, L. Tibell, S. Tibell and S.C. Karunarathna. 2018. Fungal diversity notes 709–839: taxonomic and phylogenetic contributions to fungal taxa with an emphasis on fungi on Rosaceae. Fungal Divers. 89: 1–236.10.1007/s13225-018-0395-7Search in Google Scholar

Weber, E. 2002. The Lecythophora-Coniochaeta complex I. Morphological studies on Lecythophora species isolated from Picea abies. Nova Hedw. 74: 159–185.10.1127/0029-5035/2002/0074-0159Search in Google Scholar

Weber, E., C. Görke and D. Begerow. 2002. The Lecythophora-Coniochaeta complex: II. Molecular studies based on sequences of the large subunit of ribosomal DNA. Nova Hedw. 74: 187–200.10.1127/0029-5035/2002/0074-0187Search in Google Scholar

White, T.J., T. Bruns, S. Lee and J. Taylor. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: (M.A. Innis, D.H. Gelfand, J.J. Sninsky and T.J. White, eds) PCR protocols: a guide tomethods and applications. Academic Press, New York. pp. 315–322.10.1016/B978-0-12-372180-8.50042-1Search in Google Scholar

Wijayawardene, N.N., K.D. Hyde, K.C. Rajeshkumar, D.L. Hawksworth, H. Madrid, P.M. Kirk, U. Braun, R.V. Singh, P.W. Crous, M. Kukwa, R. Lücking, C.P. Kurtzman, A. Yurkov, D. Haelewaters, A. Aptroot, H.T. Lumbsch, E. Timdal, D. Ertz, J. Etayo, A.J.L. Phillips, J.Z. Groenewald, M. Papizadeh, L. Selbmann, M.C. Dayarathne, G. Weerakoon, E.B.G. Jones, S. Suetrong, Q. Tian, R.F. Castanéda-Ruiz, A.H. Bahkali, K.L. Pang, K. Tanaka, D.Q. Dai, J. Sakayaroj, M. Hujslová, L. Lombard, B.D. Shenoy, A. Suija, S.S.N. Maharachchikumbura, K.M. Thambugala, D.N. Wanasinghe, B.O. Sharma, S. Gaikwad, G. Pandit, L. Zucconi, S. Onofri, E. Egidi, H.A. Raja, R. Kodsueb, M.E.S. Cáceres, S. Pérez-Ortega, P.O. Fiuza, J.S. Monteiro, L.N. Vasilyeva, R.G. Shivas, M. Prieto, M. Wedin, I. Olariaga, A.A. Lateef, Y. Agrawal, S.A.S. Fazeli, M.A. Amoozegar, G.Z. Zhao, W.P. Pfliegler, G. Sharma, M. Oset, M.A. Abdel-Wahab, S. Takamatsu, K. Bensch, N.I. de Silva, A. De Kesel, A. Karunarathna, S. Boonmee, D.H. Pfister, Y.Z. Lu, Z.L. Luo, N. Boonyuen, D.A. Daranagama, I.C. Senanayake, S.C. Jayasiri, M.C. Samarakoon, X.Y. Zeng, M. Doilom, L. Quijada, S. Rampadarath, G. Heredia, A.J. Dissanayake, R.S. Jayawardana, P.H. Perera, L.Z. Tang, C. Phukhamsakda, M. Hernández-Restrepo, X.Y. Ma, S. Tibpromma, L.F.P. Gusmao, D. Weerahewa and S.C. Karunarathna. 2017. Notes for genera: Ascomycota. Fungal Divers. 86: 1–594.10.1007/s13225-017-0386-0Search in Google Scholar

Wijayawardene, N.N., K.D. Hyde, H.T. Lumbsch, J.K. Liu, S.S.N. Maharachchikumbura, A.H. Ekanayaka, Q. Tian and R. Phookamsak. 2018. Outline of Ascomycota: 2017. Fungal Divers. 88: 167–263.10.1007/s13225-018-0394-8Search in Google Scholar

Xu, W., Z.H. Luo, S. Guo and K.L. Pang. 2016. Fungal community analysis in the deep-sea sediments of the Pacific Ocean assessed by comparison of ITS, 18S and 28S ribosomal DNA regions. Deep-Sea Res. I 10: 951–960.10.1016/j.dsr.2016.01.001Search in Google Scholar

Xu, W., S. Guo, K.L. Pang and Z.H. Luo. 2017. Fungi associated with chimney and sulfide samples from a South Mid-Atlantic Ridge hydrothermal site: distribution, diversity and abundance. Deep-Sea Res. I 123: 48–55.10.1016/j.dsr.2017.03.004Search in Google Scholar

Xu, W., L.F. Gonga, K.L. Pang and Z.H. Luo. 2018. Fungal diversity in deep-sea sediments of a hydrothermal vent system in the Southwest Indian Ridge. Deep-Sea Res. I 131: 16–26.10.1016/j.dsr.2017.11.001Search in Google Scholar

Zhang, Y., C.L. Schoch, J. Fournier, P.W. Crous, J. de Gruyter, J.H.C. Woudenberg, K. Hirayama, K. Tanaka, S.B. Pointing, J.W. Spatafora and K.D. Hyde. 2009. Multi-locus phylogeny of the Pleosporales: a taxonomic, ecological and evolutionary re-evaluation. Stud. Mycol. 64: 85–102.10.3114/sim.2009.64.04Search in Google Scholar PubMed PubMed Central

Zhang, Y., P.W. Crous, C.L. Schoch and K.D. Hyde. 2012. Pleosporales. Fungal Divers. 53: 1–221.10.1007/s13225-011-0117-xSearch in Google Scholar PubMed PubMed Central

Zhang, S.N., K.D. Hyde, E.B.G. Jones, R. Jeewon, R. Cheewangkoon and J.K. Li. 2019. Striatiguttulaceae, a new pleosporalean family to accommodate Longicorpus and Striatiguttula gen. nov. from palms. MycoKeys 49: 99–129.10.3897/mycokeys.49.30886Search in Google Scholar PubMed PubMed Central