Quartz crystal microbalance-based biosensor for the detection of α-thalassemia 1 (SEA deletion)
-
Sirinart Chomean
Abstract
Background: DNA piezoelectric biosensors have become a promising tool in molecular medicine since they do not require any label or staining. Here, a DNA piezoelectric biosensor based on a quartz crystal microbalance (QCM) was created to identify abnormal genes causing α-thalassemia 1 (SEA deletion).
Methods: The functionalized gold electrode of the quartz crystal was coated with avidin and the biotinylated DNA probe was attached. The target gene causing α-thalassemia 1 was amplified and hybridized with the immobilized probe. DNA hybridization was indicated by changes in the quartz resonance frequencies. Diagnostic ability of the new α-thalassemia 1 biosensor was validated using both known and unknown blood samples. Specificity was tested using samples of β-thalassemia and α-thalassemia 2. Stability of the sensor was also evaluated.
Results: The new biosensor could clearly identify α-thalassemia 1 (SEA deletion), both carrier and disease states, from the normal genotype. Identification accuracy was compatible to the standard gel electrophoresis. It was specific only to α-thalassemia 1 since no cross reaction was found with β-thalassemia and α-thalassemia 2. The sensor could be kept at room temperature up to 6 months with consistent identification accuracy.
Conclusions: The label free QCM based biosensor was successfully developed to diagnose an abnormal human globin gene causing α-thalassemia 1 (SEA deletion). Its accuracy, specificity and sensitivity were comparable to the standard method. Its stable diagnostic potency up to 6 months implied its field application in thalassemic control program.
Clin Chem Lab Med 2010;48:1247–54.
©2010 by Walter de Gruyter Berlin New York
Articles in the same Issue
- Editorial
- Lost in translation…wallowing in transformation?
- Reviews
- Coeliac disease – a diagnostic and therapeutic challenge
- Advancements in anemias related to chronic conditions
- Opinion Paper
- Translations of the “Evidence-Based Medicine” concept in different languages: is it time for international standardisation?
- Genetics and Molecular Diagnostics
- Rapid detection of glycogen storage disease type Ia by DNA microarray
- Transfer of myxovirus-protein-A mRNA assay for interferon-β bioactivity measurement in multiple sclerosis patients to routine laboratory practice. A 4-year experience
- General Clinical Chemistry and Laboratory Medicine
- Transferrin receptor expression on reticulocytes as a marker of iron status in dialyzed patients
- Quartz crystal microbalance-based biosensor for the detection of α-thalassemia 1 (SEA deletion)
- Retrospective analysis of 88,429 serum and urine glucose EQA results obtained from professional laboratories and medical offices participating in surveys organized by three European EQA centers between 1996 and 2007
- Liquid phase immunoassays utilizing magnetic markers and SQUID magnetometer
- L-Phenylalanine concentration in blood of phenylketonuria patients: a modified enzyme colorimetric assay compared with amino acid analysis, tandem mass spectrometry, and HPLC methods
- Amniotic fluid α-fetoprotein microheterogeneity in the prenatal diagnosis of congenital disorders of glycosylation type Ia
- Minor histocompatibility antigen HA-1 and HA-2 polymorphisms in Taiwan: frequency and application in hematopoietic stem cell transplantation
- Reference Values and Biological Variations
- Blood cell and iron status analytes of preterm and full-term infants from 20 weeks onwards during the first year of life
- Cancer Diagnostics
- Quantitative denaturing high performance liquid chromatography (Q-dHPLC) detection of APC long DNA in faeces from patients with colorectal cancer
- Rapid intraoperative parathyroid hormone assay in fine needle aspiration for differential diagnosis in thyroid and parathyroid surgery
- Serum albumin-bound proteomic signature for early detection and staging of hepatocarcinoma: sample variability and data classification
- Prevalence of atrophic gastritis in dyspeptic patients in Piedmont. A survey using the GastroPanel test
- Cardiovascular Diseses
- Diagnostic accuracy of B-type natriuretic hormone for congenital heart disease in the first month of life
- Carcinoembryonic antigen concentrations in patients with acute coronary syndrome
- Evolution of vitamin D binding protein concentration in sera from cardiac surgery patients is determined by triglyceridemia
- Letters to the Editor
- Effect of storage temperature or collection tube type on blood methylmalonic acid concentrations measured by gas chromatography-mass spectrometry
- Acute porphyrias may be overlooked in patients taking methenamine hippurate
- Reduced plasma apolipoprotein A-V concentrations in two lecithin:cholesterol acyltransferase deficient patients
- Salivary calcium: a risk indicator in periodontal disease
- S100B protein increases in human blood and urine during stressful activity
- Congress Abstracts
- Congress of Clinical Chemistry and Laboratory Medicine 7th Annual Conference of the German Society for Clinical Chemistry and Laboratory Medicine (DGKL) Mannheim, Germany, 29th September – 02nd October, 2010
- 9th National Congress of the Greek Society of Clinical Chemistry Athens, Greece, October 7 – 9, 2010
- 42nd National Congress of the Italian Society of Clinical Biochemistry and Clinical Molecular Biology ROME MARRIOTT PARK HOTEL, Rome (Italy), 5 – 8 October 2010
Articles in the same Issue
- Editorial
- Lost in translation…wallowing in transformation?
- Reviews
- Coeliac disease – a diagnostic and therapeutic challenge
- Advancements in anemias related to chronic conditions
- Opinion Paper
- Translations of the “Evidence-Based Medicine” concept in different languages: is it time for international standardisation?
- Genetics and Molecular Diagnostics
- Rapid detection of glycogen storage disease type Ia by DNA microarray
- Transfer of myxovirus-protein-A mRNA assay for interferon-β bioactivity measurement in multiple sclerosis patients to routine laboratory practice. A 4-year experience
- General Clinical Chemistry and Laboratory Medicine
- Transferrin receptor expression on reticulocytes as a marker of iron status in dialyzed patients
- Quartz crystal microbalance-based biosensor for the detection of α-thalassemia 1 (SEA deletion)
- Retrospective analysis of 88,429 serum and urine glucose EQA results obtained from professional laboratories and medical offices participating in surveys organized by three European EQA centers between 1996 and 2007
- Liquid phase immunoassays utilizing magnetic markers and SQUID magnetometer
- L-Phenylalanine concentration in blood of phenylketonuria patients: a modified enzyme colorimetric assay compared with amino acid analysis, tandem mass spectrometry, and HPLC methods
- Amniotic fluid α-fetoprotein microheterogeneity in the prenatal diagnosis of congenital disorders of glycosylation type Ia
- Minor histocompatibility antigen HA-1 and HA-2 polymorphisms in Taiwan: frequency and application in hematopoietic stem cell transplantation
- Reference Values and Biological Variations
- Blood cell and iron status analytes of preterm and full-term infants from 20 weeks onwards during the first year of life
- Cancer Diagnostics
- Quantitative denaturing high performance liquid chromatography (Q-dHPLC) detection of APC long DNA in faeces from patients with colorectal cancer
- Rapid intraoperative parathyroid hormone assay in fine needle aspiration for differential diagnosis in thyroid and parathyroid surgery
- Serum albumin-bound proteomic signature for early detection and staging of hepatocarcinoma: sample variability and data classification
- Prevalence of atrophic gastritis in dyspeptic patients in Piedmont. A survey using the GastroPanel test
- Cardiovascular Diseses
- Diagnostic accuracy of B-type natriuretic hormone for congenital heart disease in the first month of life
- Carcinoembryonic antigen concentrations in patients with acute coronary syndrome
- Evolution of vitamin D binding protein concentration in sera from cardiac surgery patients is determined by triglyceridemia
- Letters to the Editor
- Effect of storage temperature or collection tube type on blood methylmalonic acid concentrations measured by gas chromatography-mass spectrometry
- Acute porphyrias may be overlooked in patients taking methenamine hippurate
- Reduced plasma apolipoprotein A-V concentrations in two lecithin:cholesterol acyltransferase deficient patients
- Salivary calcium: a risk indicator in periodontal disease
- S100B protein increases in human blood and urine during stressful activity
- Congress Abstracts
- Congress of Clinical Chemistry and Laboratory Medicine 7th Annual Conference of the German Society for Clinical Chemistry and Laboratory Medicine (DGKL) Mannheim, Germany, 29th September – 02nd October, 2010
- 9th National Congress of the Greek Society of Clinical Chemistry Athens, Greece, October 7 – 9, 2010
- 42nd National Congress of the Italian Society of Clinical Biochemistry and Clinical Molecular Biology ROME MARRIOTT PARK HOTEL, Rome (Italy), 5 – 8 October 2010